RNA–Protein interactions for RNA: ENST00000442054.5

CDC42BPA-208, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-208ENST00000442054 POU5F1Q01860 360 aaKnown RBP7.89□□□□□ -1.15
CDC42BPA-208ENST00000442054 APBA1Q02410 837 aa7.89□□□□□ -1.15
CDC42BPA-208ENST00000442054 NAB2Q15742 525 aa7.89□□□□□ -1.15
CDC42BPA-208ENST00000442054 EPC2Q52LR7 807 aa7.89□□□□□ -1.15
CDC42BPA-208ENST00000442054 CYP4A22Q5TCH4 519 aa7.89□□□□□ -1.15
CDC42BPA-208ENST00000442054 SLFN11Q7Z7L1 901 aa7.89□□□□□ -1.15
CDC42BPA-208ENST00000442054 RNF10Q8N5U6 811 aaKnown RBP7.89□□□□□ -1.15
CDC42BPA-208ENST00000442054 APPL2Q8NEU8 664 aa7.89□□□□□ -1.15
CDC42BPA-208ENST00000442054 ASAP3Q8TDY4 903 aa7.89□□□□□ -1.15
CDC42BPA-208ENST00000442054 SCFD1Q8WVM8 642 aa7.89□□□□□ -1.15
CDC42BPA-208ENST00000442054 TOP1MTQ969P6 601 aa7.89□□□□□ -1.15
CDC42BPA-208ENST00000442054 NIFKQ9BYG3 293 aaKnown RBP7.89□□□□□ -1.15
CDC42BPA-208ENST00000442054 C17orf75Q9HAS0 396 aa7.89□□□□□ -1.15
CDC42BPA-208ENST00000442054 CDHR5Q9HBB8 845 aa7.89□□□□□ -1.15
CDC42BPA-208ENST00000442054 RBM12Q9NTZ6 932 aaKnown RBP7.89□□□□□ -1.15
CDC42BPA-208ENST00000442054 AJAP1Q9UKB5 411 aaPredicted RBP7.89□□□□□ -1.15
CDC42BPA-208ENST00000442054 ADGRA3Q8IWK6 1321 aa7.89□□□□□ -1.15
CDC42BPA-208ENST00000442054 FGF18O76093 207 aa7.89□□□□□ -1.15
CDC42BPA-208ENST00000442054 RECQL4O94761 1208 aa7.89□□□□□ -1.15
CDC42BPA-208ENST00000442054 CYLC1P35663 651 aaPredicted RBP7.89□□□□□ -1.15
CDC42BPA-208ENST00000442054 MTIF2P46199 727 aaKnown RBP7.89□□□□□ -1.15
CDC42BPA-208ENST00000442054 KYAT1Q16773 422 aa7.89□□□□□ -1.15
CDC42BPA-208ENST00000442054 SECISBP2LQ93073 1101 aaKnown RBP7.89□□□□□ -1.15
CDC42BPA-208ENST00000442054 ODF2LQ9ULJ1 636 aa7.89□□□□□ -1.15
CDC42BPA-208ENST00000442054 LOC285556D6RIA3 1793 aa7.89□□□□□ -1.15
CDC42BPA-208ENST00000442054 ZMYM2Q9UBW7 1377 aa7.89□□□□□ -1.15
CDC42BPA-208ENST00000442054 CD19P15391 556 aa7.89□□□□□ -1.15
CDC42BPA-208ENST00000442054 MUTP22033 750 aa7.89□□□□□ -1.15
CDC42BPA-208ENST00000442054 LMAN1P49257 510 aa7.89□□□□□ -1.15
CDC42BPA-208ENST00000442054 GHRHRQ02643 423 aa7.89□□□□□ -1.15
CDC42BPA-208ENST00000442054 ALCAMQ13740 583 aa7.89□□□□□ -1.15
CDC42BPA-208ENST00000442054 CAPSQ13938 189 aa7.89□□□□□ -1.15
CDC42BPA-208ENST00000442054 SURF1Q15526 300 aa7.89□□□□□ -1.15
CDC42BPA-208ENST00000442054 SAAL1Q96ER3 474 aa7.89□□□□□ -1.15
CDC42BPA-208ENST00000442054 REEP2Q9BRK0 252 aa7.89□□□□□ -1.15
CDC42BPA-208ENST00000442054 TXLNGYQ9BZA5 131 aa7.89□□□□□ -1.15
CDC42BPA-208ENST00000442054 NGRNQ9NPE2 291 aaKnown RBP7.89□□□□□ -1.15
CDC42BPA-208ENST00000442054 TLR9Q9NR96 1032 aa7.89□□□□□ -1.15
CDC42BPA-208ENST00000442054 MAGED2Q9UNF1 606 aaPredicted RBP7.89□□□□□ -1.15
CDC42BPA-208ENST00000442054 SQORQ9Y6N5 450 aa7.89□□□□□ -1.15
CDC42BPA-208ENST00000442054 SIP14410 1827 aa7.88□□□□□ -1.15
CDC42BPA-208ENST00000442054 KAT6AQ92794 2004 aa7.88□□□□□ -1.15
CDC42BPA-208ENST00000442054 NCK2O43639 380 aa7.88□□□□□ -1.15
CDC42BPA-208ENST00000442054 TOM1L1O75674 476 aa7.88□□□□□ -1.15
CDC42BPA-208ENST00000442054 CLTAP09496 248 aa7.88□□□□□ -1.15
CDC42BPA-208ENST00000442054 FAM153BP0C7A2 387 aa7.88□□□□□ -1.15
CDC42BPA-208ENST00000442054 ARF4P18085 180 aaPredicted RBP7.88□□□□□ -1.15
CDC42BPA-208ENST00000442054 IRAK1P51617 712 aa7.88□□□□□ -1.15
CDC42BPA-208ENST00000442054 GFPT1Q06210 699 aaPredicted RBP7.88□□□□□ -1.15
CDC42BPA-208ENST00000442054 CKAP4Q07065 602 aaKnown RBP7.88□□□□□ -1.15
CDC42BPA-208ENST00000442054 COASYQ13057 564 aa7.88□□□□□ -1.15
CDC42BPA-208ENST00000442054 PCBP1Q15365 356 aaKnown RBP eCLIP7.88□□□□□ -1.15
CDC42BPA-208ENST00000442054 BMT2Q1RMZ1 405 aa7.88□□□□□ -1.15
CDC42BPA-208ENST00000442054 TSR1Q2NL82 804 aaKnown RBP7.88□□□□□ -1.15
CDC42BPA-208ENST00000442054 FAM153CQ494X1 144 aa7.88□□□□□ -1.15
CDC42BPA-208ENST00000442054 PPM1LQ5SGD2 360 aa7.88□□□□□ -1.15
CDC42BPA-208ENST00000442054 PACS2Q86VP3 889 aa7.88□□□□□ -1.15
CDC42BPA-208ENST00000442054 FAM114A1Q8IWE2 563 aa7.88□□□□□ -1.15
CDC42BPA-208ENST00000442054 RUSC1Q9BVN2 902 aa7.88□□□□□ -1.15
CDC42BPA-208ENST00000442054 GPR88Q9GZN0 384 aa7.88□□□□□ -1.15
CDC42BPA-208ENST00000442054 NSUN3Q9H649 340 aaKnown RBP7.88□□□□□ -1.15
CDC42BPA-208ENST00000442054 CYP4F11Q9HBI6 524 aa7.88□□□□□ -1.15
CDC42BPA-208ENST00000442054 SEPT11Q9NVA2 429 aaKnown RBP7.88□□□□□ -1.15
CDC42BPA-208ENST00000442054 CEP72Q9P209 647 aa7.88□□□□□ -1.15
CDC42BPA-208ENST00000442054 SEL1LQ9UBV2 794 aa7.88□□□□□ -1.15
CDC42BPA-208ENST00000442054 FAM153AQ9UHL3 310 aa7.88□□□□□ -1.15
CDC42BPA-208ENST00000442054 A0A0U1RQF3 1178 aa7.88□□□□□ -1.15
CDC42BPA-208ENST00000442054 GRID2IPA4D2P6 1211 aa7.88□□□□□ -1.15
CDC42BPA-208ENST00000442054 SPATA31C1P0DKV0 1188 aa7.88□□□□□ -1.15
CDC42BPA-208ENST00000442054 ALDH1A3P47895 512 aa7.88□□□□□ -1.15
CDC42BPA-208ENST00000442054 TRADDQ15628 312 aa7.88□□□□□ -1.15
CDC42BPA-208ENST00000442054 USP41Q3LFD5 358 aa7.88□□□□□ -1.15
CDC42BPA-208ENST00000442054 CTXN3Q4LDR2 81 aa7.88□□□□□ -1.15
CDC42BPA-208ENST00000442054 TMC5Q6UXY8 1006 aa7.88□□□□□ -1.15
CDC42BPA-208ENST00000442054 EIF1ADQ8N9N8 165 aaKnown RBP7.88□□□□□ -1.15
CDC42BPA-208ENST00000442054 OR6B3Q8NGW1 331 aa7.88□□□□□ -1.15
CDC42BPA-208ENST00000442054 ARL8AQ96BM9 186 aa7.88□□□□□ -1.15
CDC42BPA-208ENST00000442054 DDX27Q96GQ7 796 aaKnown RBP7.88□□□□□ -1.15
CDC42BPA-208ENST00000442054 ZFP42Q96MM3 310 aa7.88□□□□□ -1.15
CDC42BPA-208ENST00000442054 FIZ1Q96SL8 496 aa7.88□□□□□ -1.15
CDC42BPA-208ENST00000442054 HSD17B14Q9BPX1 270 aa7.88□□□□□ -1.15
CDC42BPA-208ENST00000442054 KCND2Q9NZV8 630 aa7.88□□□□□ -1.15
CDC42BPA-208ENST00000442054 IPPQ9Y573 584 aa7.88□□□□□ -1.15
CDC42BPA-208ENST00000442054 TTC28Q96AY4 2481 aa7.88□□□□□ -1.15
CDC42BPA-208ENST00000442054 B4GALT5O43286 388 aa7.88□□□□□ -1.15
CDC42BPA-208ENST00000442054 XYLBO75191 536 aa7.88□□□□□ -1.15
CDC42BPA-208ENST00000442054 ATG7O95352 703 aa7.88□□□□□ -1.15
CDC42BPA-208ENST00000442054 GLUD1P00367 558 aa7.88□□□□□ -1.15
CDC42BPA-208ENST00000442054 SPATA31D3P0C874 917 aa7.88□□□□□ -1.15
CDC42BPA-208ENST00000442054 ANXA13P27216 316 aa7.88□□□□□ -1.15
CDC42BPA-208ENST00000442054 CASP5P51878 434 aa7.88□□□□□ -1.15
CDC42BPA-208ENST00000442054 TMEM132DQ14C87 1099 aa7.88□□□□□ -1.15
CDC42BPA-208ENST00000442054 MGAT5BQ3V5L5 792 aa7.88□□□□□ -1.15
CDC42BPA-208ENST00000442054 MPZL3Q6UWV2 235 aa7.88□□□□□ -1.15
CDC42BPA-208ENST00000442054 SPATA31D4Q6ZUB0 917 aa7.88□□□□□ -1.15
CDC42BPA-208ENST00000442054 SYT2Q8N9I0 419 aaPredicted RBP7.88□□□□□ -1.15
CDC42BPA-208ENST00000442054 SLC30A5Q8TAD4 765 aa7.88□□□□□ -1.15
CDC42BPA-208ENST00000442054 DHX38Q92620 1227 aaKnown RBP7.88□□□□□ -1.15
CDC42BPA-208ENST00000442054 NXF3Q9H4D5 531 aaKnown RBP7.88□□□□□ -1.15
CDC42BPA-208ENST00000442054 DHX33Q9H6R0 707 aaKnown RBP7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms