RNA–Protein interactions for RNA: ENST00000441310.6

PMS1-213, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PMS1, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-213ENST00000441310 CA4P22748 312 aa17.74■□□□□ 0.43
PMS1-213ENST00000441310 SPDYE2Q495Y8 402 aa17.74■□□□□ 0.43
PMS1-213ENST00000441310 ARSHQ5FYA8 562 aa17.74■□□□□ 0.43
PMS1-213ENST00000441310 SH2D4BQ5SQS7 431 aa17.74■□□□□ 0.43
PMS1-213ENST00000441310 DAB2IPQ5VWQ8 1189 aa17.74■□□□□ 0.43
PMS1-213ENST00000441310 SATL1Q86VE3 508 aa17.74■□□□□ 0.43
PMS1-213ENST00000441310 SLC13A5Q86YT5 568 aaPredicted RBP17.74■□□□□ 0.43
PMS1-213ENST00000441310 CPXCR1Q8N123 301 aa17.74■□□□□ 0.43
PMS1-213ENST00000441310 CLMNQ96JQ2 1002 aa17.74■□□□□ 0.43
PMS1-213ENST00000441310 FAM161BQ96MY7 647 aa17.74■□□□□ 0.43
PMS1-213ENST00000441310 RMI1Q9H9A7 625 aa17.74■□□□□ 0.43
PMS1-213ENST00000441310 SAR1AQ9NR31 198 aa17.74■□□□□ 0.43
PMS1-213ENST00000441310 ZNRF3Q9ULT6 936 aa17.74■□□□□ 0.43
PMS1-213ENST00000441310 TMX2Q9Y320 296 aa17.74■□□□□ 0.43
PMS1-213ENST00000441310 GREB1LQ9C091 1923 aaPredicted RBP17.74■□□□□ 0.43
PMS1-213ENST00000441310 RSPH10B2B2RC85 870 aa17.74■□□□□ 0.43
PMS1-213ENST00000441310 WNT10BO00744 389 aa17.74■□□□□ 0.43
PMS1-213ENST00000441310 RSPH10BP0C881 870 aa17.74■□□□□ 0.43
PMS1-213ENST00000441310 RPA3P35244 121 aaPredicted RBP17.74■□□□□ 0.43
PMS1-213ENST00000441310 AP3B2Q13367 1082 aa17.74■□□□□ 0.43
PMS1-213ENST00000441310 DRAP1Q14919 205 aaPredicted RBP17.74■□□□□ 0.43
PMS1-213ENST00000441310 RFWD2Q8NHY2 731 aa17.74■□□□□ 0.43
PMS1-213ENST00000441310 ECSITQ9BQ95 431 aa17.74■□□□□ 0.43
PMS1-213ENST00000441310 HOMER2Q9NSB8 354 aa17.74■□□□□ 0.43
PMS1-213ENST00000441310 PCDHB13Q9Y5F0 798 aa17.74■□□□□ 0.43
PMS1-213ENST00000441310 GMEB1Q9Y692 573 aa17.74■□□□□ 0.43
PMS1-213ENST00000441310 ASTN2O75129 1339 aaPredicted RBP17.73■□□□□ 0.43
PMS1-213ENST00000441310 POC1B-GALNT4F8VUJ3 575 aa17.73■□□□□ 0.43
PMS1-213ENST00000441310 SUPT3HO75486 399 aa17.73■□□□□ 0.43
PMS1-213ENST00000441310 FGFR1P11362 822 aa17.73■□□□□ 0.43
PMS1-213ENST00000441310 KRT15P19012 456 aa17.73■□□□□ 0.43
PMS1-213ENST00000441310 SOX5P35711 763 aa17.73■□□□□ 0.43
PMS1-213ENST00000441310 ZBTB16Q05516 673 aa17.73■□□□□ 0.43
PMS1-213ENST00000441310 SLC1A5Q15758 541 aa17.73■□□□□ 0.43
PMS1-213ENST00000441310 ARHGAP44Q17R89 818 aa17.73■□□□□ 0.43
PMS1-213ENST00000441310 LRRC36Q1X8D7 754 aa17.73■□□□□ 0.43
PMS1-213ENST00000441310 FYB2Q5VWT5 728 aa17.73■□□□□ 0.43
PMS1-213ENST00000441310 CCDC77Q9BR77 488 aa17.73■□□□□ 0.43
PMS1-213ENST00000441310 BHMT2Q9H2M3 363 aa17.73■□□□□ 0.43
PMS1-213ENST00000441310 HEY2Q9UBP5 337 aa17.73■□□□□ 0.43
PMS1-213ENST00000441310 LGALS13Q9UHV8 139 aa17.73■□□□□ 0.43
PMS1-213ENST00000441310 ANGPTL2Q9UKU9 493 aa17.73■□□□□ 0.43
PMS1-213ENST00000441310 PCDHA2Q9Y5H9 948 aa17.73■□□□□ 0.43
PMS1-213ENST00000441310 C2CD2LO14523 706 aa17.73■□□□□ 0.43
PMS1-213ENST00000441310 BAG6P46379 1132 aa17.73■□□□□ 0.43
PMS1-213ENST00000441310 SPIRE1Q08AE8 756 aa17.73■□□□□ 0.43
PMS1-213ENST00000441310 PDK4Q16654 411 aa17.73■□□□□ 0.43
PMS1-213ENST00000441310 CAPN12Q6ZSI9 719 aa17.73■□□□□ 0.43
PMS1-213ENST00000441310 NME8Q8N427 588 aa17.73■□□□□ 0.43
PMS1-213ENST00000441310 ATG4AQ8WYN0 398 aa17.73■□□□□ 0.43
PMS1-213ENST00000441310 TRABDQ9H4I3 376 aa17.73■□□□□ 0.43
PMS1-213ENST00000441310 DDX43Q9NXZ2 648 aaKnown RBP17.73■□□□□ 0.43
PMS1-213ENST00000441310 FZD1Q9UP38 647 aa17.73■□□□□ 0.43
PMS1-213ENST00000441310 MIF4GDA9UHW6 222 aaKnown RBP17.72■□□□□ 0.43
PMS1-213ENST00000441310 DDX39AO00148 427 aaKnown RBP17.72■□□□□ 0.43
PMS1-213ENST00000441310 CLIC2O15247 247 aa17.72■□□□□ 0.43
PMS1-213ENST00000441310 ZWINTO95229 277 aa17.72■□□□□ 0.43
PMS1-213ENST00000441310 POTEJP0CG39 1038 aa17.72■□□□□ 0.43
PMS1-213ENST00000441310 SPATA31C1P0DKV0 1188 aa17.72■□□□□ 0.43
PMS1-213ENST00000441310 FUT4P22083 530 aa17.72■□□□□ 0.43
PMS1-213ENST00000441310 SREBF1P36956 1147 aa17.72■□□□□ 0.43
PMS1-213ENST00000441310 GRIA2P42262 883 aa17.72■□□□□ 0.43
PMS1-213ENST00000441310 FRMD5Q7Z6J6 570 aa17.72■□□□□ 0.43
PMS1-213ENST00000441310 SLFN12Q8IYM2 578 aa17.72■□□□□ 0.43
PMS1-213ENST00000441310 NSL1Q96IY1 281 aa17.72■□□□□ 0.43
PMS1-213ENST00000441310 BTBD6Q96KE9 485 aa17.72■□□□□ 0.43
PMS1-213ENST00000441310 IKZF4Q9H2S9 585 aa17.72■□□□□ 0.43
PMS1-213ENST00000441310 EBF3Q9H4W6 596 aa17.72■□□□□ 0.43
PMS1-213ENST00000441310 FBXO6Q9NRD1 293 aaPredicted RBP17.72■□□□□ 0.43
PMS1-213ENST00000441310 TAS2R1Q9NYW7 299 aa17.72■□□□□ 0.43
PMS1-213ENST00000441310 A0A0J9YVX5 310 aa17.72■□□□□ 0.43
PMS1-213ENST00000441310 TULP1O00294 542 aaPredicted RBP17.72■□□□□ 0.43
PMS1-213ENST00000441310 CCDC166P0CW27 439 aa17.72■□□□□ 0.43
PMS1-213ENST00000441310 HARSP12081 509 aaKnown RBP17.72■□□□□ 0.43
PMS1-213ENST00000441310 PGM1P36871 562 aa17.72■□□□□ 0.43
PMS1-213ENST00000441310 PRAMEF18Q5VWM3 479 aa17.72■□□□□ 0.43
PMS1-213ENST00000441310 TPH2Q8IWU9 490 aa17.72■□□□□ 0.43
PMS1-213ENST00000441310 RNF168Q8IYW5 571 aaPredicted RBP17.72■□□□□ 0.43
PMS1-213ENST00000441310 CRYGNQ8WXF5 182 aa17.72■□□□□ 0.43
PMS1-213ENST00000441310 HAUS1Q96CS2 278 aa17.72■□□□□ 0.43
PMS1-213ENST00000441310 ZNF341Q9BYN7 854 aa17.72■□□□□ 0.43
PMS1-213ENST00000441310 WHRNQ9P202 907 aa17.72■□□□□ 0.43
PMS1-213ENST00000441310 ANAPC5Q9UJX4 755 aa17.72■□□□□ 0.43
PMS1-213ENST00000441310 DNAJC12Q9UKB3 198 aa17.72■□□□□ 0.43
PMS1-213ENST00000441310 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.72■□□□□ 0.43
PMS1-213ENST00000441310 SEC23IPQ9Y6Y8 1000 aaKnown RBP17.72■□□□□ 0.43
PMS1-213ENST00000441310 KDM3AQ9Y4C1 1321 aa17.72■□□□□ 0.43
PMS1-213ENST00000441310 ANKRD62A6NC57 917 aa17.72■□□□□ 0.43
PMS1-213ENST00000441310 CLDN3O15551 220 aa17.72■□□□□ 0.43
PMS1-213ENST00000441310 ATMINO43313 823 aaPredicted RBP17.72■□□□□ 0.43
PMS1-213ENST00000441310 LRRN2O75325 713 aa17.72■□□□□ 0.43
PMS1-213ENST00000441310 CBX3Q13185 183 aa17.72■□□□□ 0.43
PMS1-213ENST00000441310 RASA3Q14644 834 aa17.72■□□□□ 0.43
PMS1-213ENST00000441310 R3HDM1Q15032 1099 aaKnown RBP17.72■□□□□ 0.43
PMS1-213ENST00000441310 EDRF1Q3B7T1 1238 aa17.72■□□□□ 0.43
PMS1-213ENST00000441310 RHBDF2Q6PJF5 856 aa17.72■□□□□ 0.43
PMS1-213ENST00000441310 DDX18Q9NVP1 670 aaKnown RBP17.72■□□□□ 0.43
PMS1-213ENST00000441310 DNM3Q9UQ16 869 aa17.72■□□□□ 0.43
PMS1-213ENST00000441310 CYP3A7-CYP3A51PA0A087WV96 503 aa17.71■□□□□ 0.43
PMS1-213ENST00000441310 CCDC160A6NGH7 325 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms