RNA–Protein interactions for RNA: ENST00000440127.1

HMGB3P11-201, Transcript of high mobility group box 3 pseudogene 11, humanhuman

BASIC

Gene HMGB3P11, Length 604 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P11-201ENST00000440127 APBA1Q02410 837 aa4.11□□□□□ -1.75
HMGB3P11-201ENST00000440127 UGT8Q16880 541 aa4.11□□□□□ -1.75
HMGB3P11-201ENST00000440127 AMOTQ4VCS5 1084 aa4.11□□□□□ -1.75
HMGB3P11-201ENST00000440127 PLEKHO1Q53GL0 409 aaPredicted RBP4.11□□□□□ -1.75
HMGB3P11-201ENST00000440127 RNF219Q5W0B1 726 aaPredicted RBP4.11□□□□□ -1.75
HMGB3P11-201ENST00000440127 CCSAPQ6IQ19 270 aaPredicted RBP4.11□□□□□ -1.75
HMGB3P11-201ENST00000440127 EFCAB12Q6NXP0 572 aa4.11□□□□□ -1.75
HMGB3P11-201ENST00000440127 CEP85Q6P2H3 762 aa4.11□□□□□ -1.75
HMGB3P11-201ENST00000440127 G2E3Q7L622 706 aa4.11□□□□□ -1.75
HMGB3P11-201ENST00000440127 EXOC8Q8IYI6 725 aa4.11□□□□□ -1.75
HMGB3P11-201ENST00000440127 ZFP28Q8NHY6 868 aa4.11□□□□□ -1.75
HMGB3P11-201ENST00000440127 WDR66Q8TBY9 1149 aa4.11□□□□□ -1.75
HMGB3P11-201ENST00000440127 PSMD1Q99460 953 aa4.11□□□□□ -1.75
HMGB3P11-201ENST00000440127 TTPALQ9BTX7 342 aa4.11□□□□□ -1.75
HMGB3P11-201ENST00000440127 ENKD1Q9H0I2 346 aa4.11□□□□□ -1.75
HMGB3P11-201ENST00000440127 CYP4F11Q9HBI6 524 aa4.11□□□□□ -1.75
HMGB3P11-201ENST00000440127 FMN2Q9NZ56 1722 aa4.11□□□□□ -1.75
HMGB3P11-201ENST00000440127 MAP3K5Q99683 1374 aa4.11□□□□□ -1.75
HMGB3P11-201ENST00000440127 RGS12O14924 1447 aa4.11□□□□□ -1.75
HMGB3P11-201ENST00000440127 FOXN1O15353 648 aa4.1□□□□□ -1.75
HMGB3P11-201ENST00000440127 AKAP10O43572 662 aa4.1□□□□□ -1.75
HMGB3P11-201ENST00000440127 GCP02774 474 aa4.1□□□□□ -1.75
HMGB3P11-201ENST00000440127 GNAI2P04899 355 aa4.1□□□□□ -1.75
HMGB3P11-201ENST00000440127 GNAI3P08754 354 aa4.1□□□□□ -1.75
HMGB3P11-201ENST00000440127 CLEC2LP0C7M8 214 aa4.1□□□□□ -1.75
HMGB3P11-201ENST00000440127 BPIP17213 487 aa4.1□□□□□ -1.75
HMGB3P11-201ENST00000440127 RAB27AP51159 221 aa4.1□□□□□ -1.75
HMGB3P11-201ENST00000440127 USP14P54578 494 aa4.1□□□□□ -1.75
HMGB3P11-201ENST00000440127 RHBDL3P58872 404 aa4.1□□□□□ -1.75
HMGB3P11-201ENST00000440127 SLC25A3Q00325 362 aa4.1□□□□□ -1.75
HMGB3P11-201ENST00000440127 FSCN1Q16658 493 aaKnown RBP4.1□□□□□ -1.75
HMGB3P11-201ENST00000440127 CPEB4Q17RY0 729 aaKnown RBP eCLIP4.1□□□□□ -1.75
HMGB3P11-201ENST00000440127 ERCC6LQ2NKX8 1250 aa4.1□□□□□ -1.75
HMGB3P11-201ENST00000440127 FAM214AQ32MH5 1076 aa4.1□□□□□ -1.75
HMGB3P11-201ENST00000440127 C1QL3Q5VWW1 255 aa4.1□□□□□ -1.75
HMGB3P11-201ENST00000440127 SLC4A10Q6U841 1118 aa4.1□□□□□ -1.75
HMGB3P11-201ENST00000440127 KRT28Q7Z3Y7 464 aa4.1□□□□□ -1.75
HMGB3P11-201ENST00000440127 GDF7Q7Z4P5 450 aa4.1□□□□□ -1.75
HMGB3P11-201ENST00000440127 MRGPREQ86SM8 312 aa4.1□□□□□ -1.75
HMGB3P11-201ENST00000440127 SPATS2Q86XZ4 545 aaKnown RBP4.1□□□□□ -1.75
HMGB3P11-201ENST00000440127 WDR75Q8IWA0 830 aaKnown RBP4.1□□□□□ -1.75
HMGB3P11-201ENST00000440127 CCAR1Q8IX12 1150 aaKnown RBP4.1□□□□□ -1.75
HMGB3P11-201ENST00000440127 DNAJC10Q8IXB1 793 aa4.1□□□□□ -1.75
HMGB3P11-201ENST00000440127 SNX33Q8WV41 574 aa4.1□□□□□ -1.75
HMGB3P11-201ENST00000440127 MYEOVQ96EZ4 313 aa4.1□□□□□ -1.75
HMGB3P11-201ENST00000440127 CRAMP1Q96RY5 1269 aa4.1□□□□□ -1.75
HMGB3P11-201ENST00000440127 ORAI2Q96SN7 254 aa4.1□□□□□ -1.75
HMGB3P11-201ENST00000440127 MEIS3Q99687 375 aa4.1□□□□□ -1.75
HMGB3P11-201ENST00000440127 FDXACB1Q9BRP7 624 aaPredicted RBP4.1□□□□□ -1.75
HMGB3P11-201ENST00000440127 RTFDC1Q9BY42 306 aaPredicted RBP4.1□□□□□ -1.75
HMGB3P11-201ENST00000440127 ANO3Q9BYT9 981 aa4.1□□□□□ -1.75
HMGB3P11-201ENST00000440127 CDH19Q9H159 772 aa4.1□□□□□ -1.75
HMGB3P11-201ENST00000440127 KCTD10Q9H3F6 313 aa4.1□□□□□ -1.75
HMGB3P11-201ENST00000440127 SPON1Q9HCB6 807 aa4.1□□□□□ -1.75
HMGB3P11-201ENST00000440127 SLC5A4Q9NY91 659 aa4.1□□□□□ -1.75
HMGB3P11-201ENST00000440127 GPRC5BQ9NZH0 403 aa4.1□□□□□ -1.75
HMGB3P11-201ENST00000440127 DMRT1Q9Y5R6 373 aa4.1□□□□□ -1.75
HMGB3P11-201ENST00000440127 RPTORQ8N122 1335 aa4.1□□□□□ -1.75
HMGB3P11-201ENST00000440127 PIK3C2AO00443 1686 aa4.1□□□□□ -1.75
HMGB3P11-201ENST00000440127 ADAMTSL3P82987 1691 aa4.1□□□□□ -1.75
HMGB3P11-201ENST00000440127 NEMP1O14524 444 aa4.09□□□□□ -1.75
HMGB3P11-201ENST00000440127 PJA2O43164 708 aa4.09□□□□□ -1.75
HMGB3P11-201ENST00000440127 FRAT2O75474 233 aaPredicted RBP4.09□□□□□ -1.75
HMGB3P11-201ENST00000440127 HOXB7P09629 217 aa4.09□□□□□ -1.75
HMGB3P11-201ENST00000440127 ENPP1P22413 925 aa4.09□□□□□ -1.75
HMGB3P11-201ENST00000440127 FLT3LGP49771 235 aa4.09□□□□□ -1.75
HMGB3P11-201ENST00000440127 ATP8B2P98198 1209 aa4.09□□□□□ -1.75
HMGB3P11-201ENST00000440127 TEFQ10587 303 aa4.09□□□□□ -1.75
HMGB3P11-201ENST00000440127 PIN1Q13526 163 aaPredicted RBP4.09□□□□□ -1.75
HMGB3P11-201ENST00000440127 UBE3CQ15386 1083 aa4.09□□□□□ -1.75
HMGB3P11-201ENST00000440127 MAP9Q49MG5 647 aa4.09□□□□□ -1.75
HMGB3P11-201ENST00000440127 GORABQ5T7V8 394 aa4.09□□□□□ -1.75
HMGB3P11-201ENST00000440127 TTC22Q5TAA0 569 aa4.09□□□□□ -1.75
HMGB3P11-201ENST00000440127 ZNF530Q6P9A1 599 aaPredicted RBP4.09□□□□□ -1.75
HMGB3P11-201ENST00000440127 CASC1Q6TDU7 716 aa4.09□□□□□ -1.75
HMGB3P11-201ENST00000440127 RHOUQ7L0Q8 258 aa4.09□□□□□ -1.75
HMGB3P11-201ENST00000440127 ARHGEF25Q86VW2 580 aa4.09□□□□□ -1.75
HMGB3P11-201ENST00000440127 HSCBQ8IWL3 235 aa4.09□□□□□ -1.75
HMGB3P11-201ENST00000440127 C16orf71Q8IYS4 520 aaPredicted RBP4.09□□□□□ -1.75
HMGB3P11-201ENST00000440127 SUPT20HQ8NEM7 779 aa4.09□□□□□ -1.75
HMGB3P11-201ENST00000440127 OR10H5Q8NGA6 315 aa4.09□□□□□ -1.75
HMGB3P11-201ENST00000440127 MORC4Q8TE76 937 aa4.09□□□□□ -1.75
HMGB3P11-201ENST00000440127 AUTS2Q8WXX7 1259 aa4.09□□□□□ -1.75
HMGB3P11-201ENST00000440127 TFAP2CQ92754 450 aa4.09□□□□□ -1.75
HMGB3P11-201ENST00000440127 SNX21Q969T3 373 aa4.09□□□□□ -1.75
HMGB3P11-201ENST00000440127 MTMR8Q96EF0 704 aa4.09□□□□□ -1.75
HMGB3P11-201ENST00000440127 SLC39A13Q96H72 371 aa4.09□□□□□ -1.75
HMGB3P11-201ENST00000440127 SMAD5Q99717 465 aaKnown RBP4.09□□□□□ -1.75
HMGB3P11-201ENST00000440127 PUS7LQ9H0K6 701 aaKnown RBP4.09□□□□□ -1.75
HMGB3P11-201ENST00000440127 CCDC8Q9H0W5 538 aaPredicted RBP4.09□□□□□ -1.75
HMGB3P11-201ENST00000440127 GPRC5DQ9NZD1 345 aa4.09□□□□□ -1.75
HMGB3P11-201ENST00000440127 TRPM5Q9NZQ8 1165 aa4.09□□□□□ -1.75
HMGB3P11-201ENST00000440127 ZIM2Q9NZV7 527 aa4.09□□□□□ -1.75
HMGB3P11-201ENST00000440127 CHMP5Q9NZZ3 219 aa4.09□□□□□ -1.75
HMGB3P11-201ENST00000440127 EVLQ9UI08 416 aaPredicted RBP4.09□□□□□ -1.75
HMGB3P11-201ENST00000440127 PACSIN3Q9UKS6 424 aa4.09□□□□□ -1.75
HMGB3P11-201ENST00000440127 MSH6P52701 1360 aa4.09□□□□□ -1.75
HMGB3P11-201ENST00000440127 NWD1Q149M9 1564 aa4.09□□□□□ -1.75
HMGB3P11-201ENST00000440127 USP54Q70EL1 1684 aa4.09□□□□□ -1.76
HMGB3P11-201ENST00000440127 CHD2O14647 1828 aaKnown RBP4.09□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms