RNA–Protein interactions for RNA: ENST00000439986.8

CCBE1-202, Transcript of collagen and calcium binding EGF domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCBE1, Length 6,227 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCBE1-202ENST00000439986 SPASTQ9UBP0 616 aa12.15□□□□□ -0.47
CCBE1-202ENST00000439986 L3MBTL1Q9Y468 752 aa12.15□□□□□ -0.47
CCBE1-202ENST00000439986 FAM95CA0A1B0GW59 222 aa12.14□□□□□ -0.47
CCBE1-202ENST00000439986 DFFAO00273 331 aa12.14□□□□□ -0.47
CCBE1-202ENST00000439986 SLC16A4O15374 487 aa12.14□□□□□ -0.47
CCBE1-202ENST00000439986 GH2P01242 217 aa12.14□□□□□ -0.47
CCBE1-202ENST00000439986 KPNA2P52292 529 aaKnown RBP12.14□□□□□ -0.47
CCBE1-202ENST00000439986 TWF2Q6IBS0 349 aaKnown RBP12.14□□□□□ -0.47
CCBE1-202ENST00000439986 PPP1R18Q6NYC8 613 aa12.14□□□□□ -0.47
CCBE1-202ENST00000439986 BTNL9Q6UXG8 535 aa12.14□□□□□ -0.47
CCBE1-202ENST00000439986 ANKRD23Q86SG2 305 aa12.14□□□□□ -0.47
CCBE1-202ENST00000439986 NLGN1Q8N2Q7 840 aa12.14□□□□□ -0.47
CCBE1-202ENST00000439986 SYT2Q8N9I0 419 aaPredicted RBP12.14□□□□□ -0.47
CCBE1-202ENST00000439986 LRCH1Q9Y2L9 728 aa12.14□□□□□ -0.47
CCBE1-202ENST00000439986 DPYSL4O14531 572 aa12.14□□□□□ -0.47
CCBE1-202ENST00000439986 HSPA9P38646 679 aaKnown RBP12.14□□□□□ -0.47
CCBE1-202ENST00000439986 SPATA21Q7Z572 469 aa12.14□□□□□ -0.47
CCBE1-202ENST00000439986 PACS2Q86VP3 889 aa12.14□□□□□ -0.47
CCBE1-202ENST00000439986 NEDD1Q8NHV4 660 aa12.14□□□□□ -0.47
CCBE1-202ENST00000439986 TRIM8Q9BZR9 551 aa12.14□□□□□ -0.47
CCBE1-202ENST00000439986 ZFP69BQ9UJL9 534 aa12.14□□□□□ -0.47
CCBE1-202ENST00000439986 ZSCAN9O15535 394 aaPredicted RBP12.14□□□□□ -0.47
CCBE1-202ENST00000439986 TAC1P20366 129 aa12.14□□□□□ -0.47
CCBE1-202ENST00000439986 RXRBP28702 533 aa12.14□□□□□ -0.47
CCBE1-202ENST00000439986 CHKAP35790 457 aa12.14□□□□□ -0.47
CCBE1-202ENST00000439986 NDUFA5Q16718 116 aa12.14□□□□□ -0.47
CCBE1-202ENST00000439986 TTI2Q6NXR4 508 aa12.14□□□□□ -0.47
CCBE1-202ENST00000439986 TAS2R42Q7RTR8 314 aa12.14□□□□□ -0.47
CCBE1-202ENST00000439986 PDIK1LQ8N165 341 aa12.14□□□□□ -0.47
CCBE1-202ENST00000439986 SKA1Q96BD8 255 aa12.14□□□□□ -0.47
CCBE1-202ENST00000439986 MMADHCQ9H3L0 296 aaPredicted RBP12.14□□□□□ -0.47
CCBE1-202ENST00000439986 PPARGC1AQ9UBK2 798 aaKnown RBP12.14□□□□□ -0.47
CCBE1-202ENST00000439986 STRIP2Q9ULQ0 834 aa12.14□□□□□ -0.47
CCBE1-202ENST00000439986 UBA6A0AVT1 1052 aaPredicted RBP12.14□□□□□ -0.47
CCBE1-202ENST00000439986 GTPBP10A4D1E9 387 aaKnown RBP12.14□□□□□ -0.47
CCBE1-202ENST00000439986 E5RI56 91 aa12.14□□□□□ -0.47
CCBE1-202ENST00000439986 PRLRP16471 622 aa12.14□□□□□ -0.47
CCBE1-202ENST00000439986 SLC9A1P19634 815 aa12.14□□□□□ -0.47
CCBE1-202ENST00000439986 CAV1Q03135 178 aa12.14□□□□□ -0.47
CCBE1-202ENST00000439986 SLC35G2Q8TBE7 412 aa12.14□□□□□ -0.47
CCBE1-202ENST00000439986 C1orf54Q8WWF1 131 aa12.14□□□□□ -0.47
CCBE1-202ENST00000439986 TMEM5Q9Y2B1 443 aa12.14□□□□□ -0.47
CCBE1-202ENST00000439986 M0QYV0 167 aa12.14□□□□□ -0.47
CCBE1-202ENST00000439986 SOX11P35716 441 aa12.14□□□□□ -0.47
CCBE1-202ENST00000439986 NR1H3Q13133 447 aa12.14□□□□□ -0.47
CCBE1-202ENST00000439986 ZNF662Q6ZS27 426 aa12.14□□□□□ -0.47
CCBE1-202ENST00000439986 FASTKD5Q7L8L6 764 aaKnown RBP12.14□□□□□ -0.47
CCBE1-202ENST00000439986 RD3Q7Z3Z2 195 aa12.14□□□□□ -0.47
CCBE1-202ENST00000439986 SGSM3Q96HU1 749 aa12.14□□□□□ -0.47
CCBE1-202ENST00000439986 ANGPTL2Q9UKU9 493 aa12.14□□□□□ -0.47
CCBE1-202ENST00000439986 DIP2CQ9Y2E4 1556 aa12.13□□□□□ -0.47
CCBE1-202ENST00000439986 LCA5LO95447 670 aa12.13□□□□□ -0.47
CCBE1-202ENST00000439986 IL4RP24394 825 aa12.13□□□□□ -0.47
CCBE1-202ENST00000439986 RAD23BP54727 409 aa12.13□□□□□ -0.47
CCBE1-202ENST00000439986 TAF1BQ53T94 588 aaPredicted RBP12.13□□□□□ -0.47
CCBE1-202ENST00000439986 CYFIP1Q7L576 1253 aa12.13□□□□□ -0.47
CCBE1-202ENST00000439986 CATSPER3Q86XQ3 398 aa12.13□□□□□ -0.47
CCBE1-202ENST00000439986 TAGAPQ8N103 731 aa12.13□□□□□ -0.47
CCBE1-202ENST00000439986 PIDD1Q9HB75 910 aa12.13□□□□□ -0.47
CCBE1-202ENST00000439986 CASS4Q9NQ75 786 aa12.13□□□□□ -0.47
CCBE1-202ENST00000439986 NDFIP2Q9NV92 336 aa12.13□□□□□ -0.47
CCBE1-202ENST00000439986 INTS13Q9NVM9 706 aa12.13□□□□□ -0.47
CCBE1-202ENST00000439986 KCTD5Q9NXV2 234 aa12.13□□□□□ -0.47
CCBE1-202ENST00000439986 DCTN4Q9UJW0 460 aa12.13□□□□□ -0.47
CCBE1-202ENST00000439986 KIDINS220Q9ULH0 1771 aa12.13□□□□□ -0.47
CCBE1-202ENST00000439986 STXBP3O00186 592 aa12.13□□□□□ -0.47
CCBE1-202ENST00000439986 PDXKO00764 312 aa12.13□□□□□ -0.47
CCBE1-202ENST00000439986 CIITAP33076 1130 aa12.13□□□□□ -0.47
CCBE1-202ENST00000439986 MTMR1Q13613 665 aa12.13□□□□□ -0.47
CCBE1-202ENST00000439986 ZNF699Q32M78 642 aa12.13□□□□□ -0.47
CCBE1-202ENST00000439986 TMEM270Q6UE05 265 aa12.13□□□□□ -0.47
CCBE1-202ENST00000439986 CRLF3Q8IUI8 442 aa12.13□□□□□ -0.47
CCBE1-202ENST00000439986 EPS8L1Q8TE68 723 aa12.13□□□□□ -0.47
CCBE1-202ENST00000439986 ZBTB18Q99592 522 aa12.13□□□□□ -0.47
CCBE1-202ENST00000439986 ARL2BPQ9Y2Y0 163 aa12.13□□□□□ -0.47
CCBE1-202ENST00000439986 A0A0U1RQJ8 604 aa12.13□□□□□ -0.47
CCBE1-202ENST00000439986 GPC3P51654 580 aa12.13□□□□□ -0.47
CCBE1-202ENST00000439986 USP11P51784 963 aa12.13□□□□□ -0.47
CCBE1-202ENST00000439986 CSNK2BP67870 215 aa12.13□□□□□ -0.47
CCBE1-202ENST00000439986 GRAPQ13588 217 aa12.13□□□□□ -0.47
CCBE1-202ENST00000439986 ZNF568Q3ZCX4 644 aa12.13□□□□□ -0.47
CCBE1-202ENST00000439986 CYB5D1Q6P9G0 228 aa12.13□□□□□ -0.47
CCBE1-202ENST00000439986 CCNYL1Q8N7R7 359 aa12.13□□□□□ -0.47
CCBE1-202ENST00000439986 XXYLT1Q8NBI6 393 aa12.13□□□□□ -0.47
CCBE1-202ENST00000439986 GRAPLQ8TC17 118 aaPredicted RBP12.13□□□□□ -0.47
CCBE1-202ENST00000439986 PBXIP1Q96AQ6 731 aa12.13□□□□□ -0.47
CCBE1-202ENST00000439986 RNF25Q96BH1 459 aaPredicted RBP12.13□□□□□ -0.47
CCBE1-202ENST00000439986 ARPC5LQ9BPX5 153 aa12.13□□□□□ -0.47
CCBE1-202ENST00000439986 OSBPL1AQ9BXW6 950 aa12.13□□□□□ -0.47
CCBE1-202ENST00000439986 SLC13A1Q9BZW2 595 aa12.13□□□□□ -0.47
CCBE1-202ENST00000439986 TRIM15Q9C019 465 aa12.13□□□□□ -0.47
CCBE1-202ENST00000439986 KLHL11Q9NVR0 708 aa12.13□□□□□ -0.47
CCBE1-202ENST00000439986 PI4KBQ9UBF8 816 aa12.13□□□□□ -0.47
CCBE1-202ENST00000439986 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.13□□□□□ -0.47
CCBE1-202ENST00000439986 SERPIND1P05546 499 aa12.13□□□□□ -0.47
CCBE1-202ENST00000439986 UBE3AQ05086 875 aa12.13□□□□□ -0.47
CCBE1-202ENST00000439986 CNGA2Q16280 664 aa12.13□□□□□ -0.47
CCBE1-202ENST00000439986 TRPM8Q7Z2W7 1104 aa12.13□□□□□ -0.47
CCBE1-202ENST00000439986 ADGRF4Q8IZF3 695 aa12.13□□□□□ -0.47
CCBE1-202ENST00000439986 MDM1Q8TC05 714 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms