RNA–Protein interactions for RNA: ENST00000438462.1

RTN4-211, Transcript of reticulon 4, humanhuman

TSL 5

Gene RTN4, Length 656 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-211ENST00000438462 TPCN1Q9ULQ1 816 aa12.4□□□□□ -0.42
RTN4-211ENST00000438462 PCDHA6Q9UN73 950 aa12.4□□□□□ -0.42
RTN4-211ENST00000438462 GIT1Q9Y2X7 761 aa12.4□□□□□ -0.42
RTN4-211ENST00000438462 PCDHA8Q9Y5H6 950 aa12.4□□□□□ -0.42
RTN4-211ENST00000438462 PCNX1Q96RV3 2341 aa12.39□□□□□ -0.43
RTN4-211ENST00000438462 ANO9A1A5B4 782 aa12.39□□□□□ -0.43
RTN4-211ENST00000438462 CER1O95813 267 aa12.39□□□□□ -0.43
RTN4-211ENST00000438462 ARSAP15289 507 aa12.39□□□□□ -0.43
RTN4-211ENST00000438462 AKAP5P24588 427 aa12.39□□□□□ -0.43
RTN4-211ENST00000438462 TKTP29401 623 aaKnown RBP12.39□□□□□ -0.43
RTN4-211ENST00000438462 GJA4P35212 333 aa12.39□□□□□ -0.43
RTN4-211ENST00000438462 ARPP19P56211 112 aa12.39□□□□□ -0.43
RTN4-211ENST00000438462 PRKCEQ02156 737 aa12.39□□□□□ -0.43
RTN4-211ENST00000438462 SCRN1Q12765 414 aa12.39□□□□□ -0.43
RTN4-211ENST00000438462 DBX2Q6ZNG2 339 aa12.39□□□□□ -0.43
RTN4-211ENST00000438462 TRIML1Q8N9V2 468 aa12.39□□□□□ -0.43
RTN4-211ENST00000438462 EXOC4Q96A65 974 aa12.39□□□□□ -0.43
RTN4-211ENST00000438462 SMG9Q9H0W8 520 aaKnown RBP12.39□□□□□ -0.43
RTN4-211ENST00000438462 NXF3Q9H4D5 531 aaKnown RBP12.39□□□□□ -0.43
RTN4-211ENST00000438462 FAM124BQ9H5Z6 455 aaPredicted RBP12.39□□□□□ -0.43
RTN4-211ENST00000438462 IFT122Q9HBG6 1241 aa12.39□□□□□ -0.43
RTN4-211ENST00000438462 GPRC5CQ9NQ84 441 aa12.39□□□□□ -0.43
RTN4-211ENST00000438462 KLK14Q9P0G3 267 aa12.39□□□□□ -0.43
RTN4-211ENST00000438462 GMIPQ9P107 970 aa12.39□□□□□ -0.43
RTN4-211ENST00000438462 TBX20Q9UMR3 447 aa12.39□□□□□ -0.43
RTN4-211ENST00000438462 KNTC1P50748 2209 aa12.39□□□□□ -0.43
RTN4-211ENST00000438462 CABIN1Q9Y6J0 2220 aa12.39□□□□□ -0.43
RTN4-211ENST00000438462 ANK1P16157 1881 aa12.38□□□□□ -0.43
RTN4-211ENST00000438462 KLK10O43240 276 aa12.38□□□□□ -0.43
RTN4-211ENST00000438462 SMARCA5O60264 1052 aaPredicted RBP12.38□□□□□ -0.43
RTN4-211ENST00000438462 SREBF1P36956 1147 aa12.38□□□□□ -0.43
RTN4-211ENST00000438462 TUSC3Q13454 348 aa12.38□□□□□ -0.43
RTN4-211ENST00000438462 CEP55Q53EZ4 464 aa12.38□□□□□ -0.43
RTN4-211ENST00000438462 IFIT1BQ5T764 474 aaKnown RBP12.38□□□□□ -0.43
RTN4-211ENST00000438462 HES3Q5TGS1 186 aa12.38□□□□□ -0.43
RTN4-211ENST00000438462 SLC8B1Q6J4K2 584 aa12.38□□□□□ -0.43
RTN4-211ENST00000438462 SLC36A4Q6YBV0 504 aa12.38□□□□□ -0.43
RTN4-211ENST00000438462 ANKS3Q6ZW76 656 aa12.38□□□□□ -0.43
RTN4-211ENST00000438462 PGBD3Q8N328 593 aa12.38□□□□□ -0.43
RTN4-211ENST00000438462 KCNE4Q8WWG9 221 aa12.38□□□□□ -0.43
RTN4-211ENST00000438462 SLC7A3Q8WY07 619 aa12.38□□□□□ -0.43
RTN4-211ENST00000438462 MINDY3Q9H8M7 445 aa12.38□□□□□ -0.43
RTN4-211ENST00000438462 SUCLA2Q9P2R7 463 aaPredicted RBP12.38□□□□□ -0.43
RTN4-211ENST00000438462 PCDHGB2Q9Y5G2 931 aa12.38□□□□□ -0.43
RTN4-211ENST00000438462 K7ENP7 123 aa12.37□□□□□ -0.43
RTN4-211ENST00000438462 IPO5O00410 1097 aaKnown RBP12.37□□□□□ -0.43
RTN4-211ENST00000438462 DHX15O43143 795 aaKnown RBP12.37□□□□□ -0.43
RTN4-211ENST00000438462 PSAPP07602 524 aa12.37□□□□□ -0.43
RTN4-211ENST00000438462 GNSP15586 552 aa12.37□□□□□ -0.43
RTN4-211ENST00000438462 ITGB6P18564 788 aa12.37□□□□□ -0.43
RTN4-211ENST00000438462 MATKP42679 507 aa12.37□□□□□ -0.43
RTN4-211ENST00000438462 GPR158Q5T848 1215 aa12.37□□□□□ -0.43
RTN4-211ENST00000438462 ZKSCAN2Q63HK3 967 aa12.37□□□□□ -0.43
RTN4-211ENST00000438462 ZNF787Q6DD87 383 aa12.37□□□□□ -0.43
RTN4-211ENST00000438462 INO80CQ6PI98 192 aaPredicted RBP12.37□□□□□ -0.43
RTN4-211ENST00000438462 DHX40Q8IX18 779 aaKnown RBP12.37□□□□□ -0.43
RTN4-211ENST00000438462 LRRC3Q9BY71 257 aa12.37□□□□□ -0.43
RTN4-211ENST00000438462 ADGRG4Q8IZF6 3080 aa12.36□□□□□ -0.43
RTN4-211ENST00000438462 ESYT2A0FGR8 921 aa12.36□□□□□ -0.43
RTN4-211ENST00000438462 ITGB2P05107 769 aa12.36□□□□□ -0.43
RTN4-211ENST00000438462 DNM2P50570 870 aa12.36□□□□□ -0.43
RTN4-211ENST00000438462 FOXK1P85037 733 aa12.36□□□□□ -0.43
RTN4-211ENST00000438462 PTH1RQ03431 593 aa12.36□□□□□ -0.43
RTN4-211ENST00000438462 IGFBP7Q16270 282 aa12.36□□□□□ -0.43
RTN4-211ENST00000438462 FTSJ3Q8IY81 847 aaKnown RBP12.36□□□□□ -0.43
RTN4-211ENST00000438462 SRRM1Q8IYB3 904 aaKnown RBP12.36□□□□□ -0.43
RTN4-211ENST00000438462 CCDC26Q8TAB7 109 aa12.36□□□□□ -0.43
RTN4-211ENST00000438462 HIC2Q96JB3 615 aa12.36□□□□□ -0.43
RTN4-211ENST00000438462 PSTPIP2Q9H939 334 aa12.36□□□□□ -0.43
RTN4-211ENST00000438462 NRBP2Q9NSY0 501 aa12.36□□□□□ -0.43
RTN4-211ENST00000438462 TCEAL9Q9UHQ7 104 aa12.36□□□□□ -0.43
RTN4-211ENST00000438462 CELSR1Q9NYQ6 3014 aa12.36□□□□□ -0.43
RTN4-211ENST00000438462 CELSR2Q9HCU4 2923 aa12.36□□□□□ -0.43
RTN4-211ENST00000438462 TMEM131Q92545 1883 aa12.36□□□□□ -0.43
RTN4-211ENST00000438462 TCRBV21S2A2A0A5A6 115 aa12.35□□□□□ -0.43
RTN4-211ENST00000438462 TRIM66O15016 1216 aa12.35□□□□□ -0.43
RTN4-211ENST00000438462 IGFBP6P24592 240 aaPredicted RBP12.35□□□□□ -0.43
RTN4-211ENST00000438462 MAOBP27338 520 aa12.35□□□□□ -0.43
RTN4-211ENST00000438462 AFMP43652 599 aa12.35□□□□□ -0.43
RTN4-211ENST00000438462 HLA-BQ31612 363 aa12.35□□□□□ -0.43
RTN4-211ENST00000438462 LINC00303Q3SY05 128 aa12.35□□□□□ -0.43
RTN4-211ENST00000438462 MTERF2Q49AM1 385 aa12.35□□□□□ -0.43
RTN4-211ENST00000438462 ZC3H18Q86VM9 953 aaKnown RBP12.35□□□□□ -0.43
RTN4-211ENST00000438462 SMAP1Q8IYB5 467 aaPredicted RBP12.35□□□□□ -0.43
RTN4-211ENST00000438462 HACE1Q8IYU2 909 aa12.35□□□□□ -0.43
RTN4-211ENST00000438462 ENGASEQ8NFI3 743 aa12.35□□□□□ -0.43
RTN4-211ENST00000438462 GPATCH3Q96I76 525 aa12.35□□□□□ -0.43
RTN4-211ENST00000438462 PGBD1Q96JS3 809 aa12.35□□□□□ -0.43
RTN4-211ENST00000438462 TRIM6Q9C030 488 aaPredicted RBP12.35□□□□□ -0.43
RTN4-211ENST00000438462 ATXN3LQ9H3M9 355 aa12.35□□□□□ -0.43
RTN4-211ENST00000438462 SAMM50Q9Y512 469 aa12.35□□□□□ -0.43
RTN4-211ENST00000438462 PCDHA10Q9Y5I2 948 aa12.35□□□□□ -0.43
RTN4-211ENST00000438462 CENPEQ02224 2701 aa12.35□□□□□ -0.43
RTN4-211ENST00000438462 CRYBG3Q68DQ2 2970 aa12.34□□□□□ -0.43
RTN4-211ENST00000438462 IGKV6-21A0A0C4DH24 114 aa12.34□□□□□ -0.43
RTN4-211ENST00000438462 I3L4J1 428 aa12.34□□□□□ -0.43
RTN4-211ENST00000438462 K7EQS6 105 aa12.34□□□□□ -0.43
RTN4-211ENST00000438462 MEIS1O00470 390 aa12.34□□□□□ -0.43
RTN4-211ENST00000438462 HMMRO75330 724 aa12.34□□□□□ -0.43
RTN4-211ENST00000438462 RLBP1P12271 317 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms