RNA–Protein interactions for RNA: ENST00000435607.3

SCN4A-201, Transcript of sodium voltage-gated channel alpha subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN4A, Length 7,805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4A-201ENST00000435607 ZNF614Q8N883 585 aa11.7□□□□□ -0.54
SCN4A-201ENST00000435607 PCSK9Q8NBP7 692 aaKnown RBP11.7□□□□□ -0.54
SCN4A-201ENST00000435607 NPC1L1Q9UHC9 1359 aa11.7□□□□□ -0.54
SCN4A-201ENST00000435607 PVALEFA0A1B0GWK0 134 aa11.7□□□□□ -0.54
SCN4A-201ENST00000435607 TNNI3P19429 210 aa11.7□□□□□ -0.54
SCN4A-201ENST00000435607 POU4F1Q01851 419 aa11.7□□□□□ -0.54
SCN4A-201ENST00000435607 HERC6Q8IVU3 1022 aa11.7□□□□□ -0.54
SCN4A-201ENST00000435607 EIF2AK1Q9BQI3 630 aaKnown RBP11.7□□□□□ -0.54
SCN4A-201ENST00000435607 VPS51Q9UID3 782 aa11.7□□□□□ -0.54
SCN4A-201ENST00000435607 MYO1CO00159 1063 aa11.7□□□□□ -0.54
SCN4A-201ENST00000435607 MYL2P10916 166 aa11.7□□□□□ -0.54
SCN4A-201ENST00000435607 RFX3P48380 749 aa11.7□□□□□ -0.54
SCN4A-201ENST00000435607 USP10Q14694 798 aaKnown RBP11.7□□□□□ -0.54
SCN4A-201ENST00000435607 PCSK7Q16549 785 aa11.7□□□□□ -0.54
SCN4A-201ENST00000435607 P3H2Q8IVL5 708 aa11.7□□□□□ -0.54
SCN4A-201ENST00000435607 RNASE11Q8TAA1 199 aaKnown RBP11.7□□□□□ -0.54
SCN4A-201ENST00000435607 AGAP3Q96P47 875 aa11.7□□□□□ -0.54
SCN4A-201ENST00000435607 NT5C1AQ9BXI3 368 aa11.7□□□□□ -0.54
SCN4A-201ENST00000435607 EXO5Q9H790 373 aa11.7□□□□□ -0.54
SCN4A-201ENST00000435607 WWOXQ9NZC7 414 aa11.7□□□□□ -0.54
SCN4A-201ENST00000435607 MRFAP1Q9Y605 127 aa11.7□□□□□ -0.54
SCN4A-201ENST00000435607 FAM200BP0CF97 657 aa11.7□□□□□ -0.54
SCN4A-201ENST00000435607 MAPK1P28482 360 aa11.7□□□□□ -0.54
SCN4A-201ENST00000435607 ARHGAP17Q68EM7 881 aa11.7□□□□□ -0.54
SCN4A-201ENST00000435607 ADGRA2Q96PE1 1338 aa11.7□□□□□ -0.54
SCN4A-201ENST00000435607 FAM187AA6NFU0 413 aa11.7□□□□□ -0.54
SCN4A-201ENST00000435607 PEX1O43933 1283 aa11.7□□□□□ -0.54
SCN4A-201ENST00000435607 CYP2C9P11712 490 aa11.7□□□□□ -0.54
SCN4A-201ENST00000435607 RALGDSQ12967 914 aa11.7□□□□□ -0.54
SCN4A-201ENST00000435607 SPATA18Q8TC71 538 aa11.7□□□□□ -0.54
SCN4A-201ENST00000435607 PHACTR1Q9C0D0 580 aa11.7□□□□□ -0.54
SCN4A-201ENST00000435607 KDM6AO15550 1401 aaPredicted RBP11.7□□□□□ -0.54
SCN4A-201ENST00000435607 ZNF608Q9ULD9 1512 aaPredicted RBP11.7□□□□□ -0.54
SCN4A-201ENST00000435607 H3BMM5 538 aa11.7□□□□□ -0.54
SCN4A-201ENST00000435607 PSMC3P17980 439 aa11.7□□□□□ -0.54
SCN4A-201ENST00000435607 SESN2P58004 480 aaPredicted RBP11.7□□□□□ -0.54
SCN4A-201ENST00000435607 COASYQ13057 564 aa11.7□□□□□ -0.54
SCN4A-201ENST00000435607 EPHA7Q15375 998 aa11.7□□□□□ -0.54
SCN4A-201ENST00000435607 PFKFB3Q16875 520 aaPredicted RBP11.7□□□□□ -0.54
SCN4A-201ENST00000435607 SLC45A4Q5BKX6 768 aa11.7□□□□□ -0.54
SCN4A-201ENST00000435607 VPS33AQ96AX1 596 aa11.7□□□□□ -0.54
SCN4A-201ENST00000435607 TSC22D3Q99576 134 aa11.7□□□□□ -0.54
SCN4A-201ENST00000435607 ZFYVE1Q9HBF4 777 aa11.7□□□□□ -0.54
SCN4A-201ENST00000435607 NEK6Q9HC98 313 aa11.7□□□□□ -0.54
SCN4A-201ENST00000435607 CHST12Q9NRB3 414 aa11.7□□□□□ -0.54
SCN4A-201ENST00000435607 TRMT6Q9UJA5 497 aaKnown RBP11.7□□□□□ -0.54
SCN4A-201ENST00000435607 PLAAQ9Y263 795 aa11.7□□□□□ -0.54
SCN4A-201ENST00000435607 SMIM22K7EJ46 135 aa11.69□□□□□ -0.54
SCN4A-201ENST00000435607 ARSEP51690 589 aa11.69□□□□□ -0.54
SCN4A-201ENST00000435607 ALDH18A1P54886 795 aaKnown RBP11.69□□□□□ -0.54
SCN4A-201ENST00000435607 RPL10AP62906 217 aaKnown RBP11.69□□□□□ -0.54
SCN4A-201ENST00000435607 SLC7A5Q01650 507 aa11.69□□□□□ -0.54
SCN4A-201ENST00000435607 SGCGQ13326 291 aa11.69□□□□□ -0.54
SCN4A-201ENST00000435607 C16orf89Q6UX73 402 aa11.69□□□□□ -0.54
SCN4A-201ENST00000435607 CYP4F11Q9HBI6 524 aa11.69□□□□□ -0.54
SCN4A-201ENST00000435607 SATB2Q9UPW6 733 aa11.69□□□□□ -0.54
SCN4A-201ENST00000435607 SNX24Q9Y343 169 aa11.69□□□□□ -0.54
SCN4A-201ENST00000435607 NBNO60934 754 aa11.69□□□□□ -0.54
SCN4A-201ENST00000435607 CUL3Q13618 768 aa11.69□□□□□ -0.54
SCN4A-201ENST00000435607 DRAP1Q14919 205 aaPredicted RBP11.69□□□□□ -0.54
SCN4A-201ENST00000435607 CNGA3Q16281 694 aa11.69□□□□□ -0.54
SCN4A-201ENST00000435607 KLHL24Q6TFL4 600 aa11.69□□□□□ -0.54
SCN4A-201ENST00000435607 POMGNT2Q8NAT1 580 aa11.69□□□□□ -0.54
SCN4A-201ENST00000435607 CLMNQ96JQ2 1002 aa11.69□□□□□ -0.54
SCN4A-201ENST00000435607 INTS2Q9H0H0 1204 aaKnown RBP11.69□□□□□ -0.54
SCN4A-201ENST00000435607 PRMT7Q9NVM4 692 aaPredicted RBP11.69□□□□□ -0.54
SCN4A-201ENST00000435607 LIMA1Q9UHB6 759 aaKnown RBP11.69□□□□□ -0.54
SCN4A-201ENST00000435607 F5H5T6 163 aa11.69□□□□□ -0.54
SCN4A-201ENST00000435607 STX7O15400 261 aaKnown RBP11.69□□□□□ -0.54
SCN4A-201ENST00000435607 GUCY1A3Q02108 690 aa11.69□□□□□ -0.54
SCN4A-201ENST00000435607 HIC1Q14526 733 aa11.69□□□□□ -0.54
SCN4A-201ENST00000435607 NBPF9Q3BBW0 867 aa11.69□□□□□ -0.54
SCN4A-201ENST00000435607 CACHD1Q5VU97 1274 aa11.69□□□□□ -0.54
SCN4A-201ENST00000435607 TTC23Q5W5X9 447 aa11.69□□□□□ -0.54
SCN4A-201ENST00000435607 MTSS1LQ765P7 747 aa11.69□□□□□ -0.54
SCN4A-201ENST00000435607 PTPRKQ15262 1439 aa11.69□□□□□ -0.54
SCN4A-201ENST00000435607 HBP1O60381 514 aa11.69□□□□□ -0.54
SCN4A-201ENST00000435607 APRTP07741 180 aa11.69□□□□□ -0.54
SCN4A-201ENST00000435607 USP17L6PQ6QN14 398 aa11.69□□□□□ -0.54
SCN4A-201ENST00000435607 CDK20Q8IZL9 346 aa11.69□□□□□ -0.54
SCN4A-201ENST00000435607 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.69□□□□□ -0.54
SCN4A-201ENST00000435607 FBXO10Q9UK96 956 aa11.69□□□□□ -0.54
SCN4A-201ENST00000435607 CKMP06732 381 aa11.69□□□□□ -0.54
SCN4A-201ENST00000435607 ENO2P09104 434 aaPredicted RBP11.69□□□□□ -0.54
SCN4A-201ENST00000435607 CDC25AP30304 524 aa11.69□□□□□ -0.54
SCN4A-201ENST00000435607 KCNK10P57789 538 aa11.69□□□□□ -0.54
SCN4A-201ENST00000435607 VSNL1P62760 191 aa11.69□□□□□ -0.54
SCN4A-201ENST00000435607 SUSD4Q5VX71 490 aa11.69□□□□□ -0.54
SCN4A-201ENST00000435607 OSBPL9Q96SU4 736 aa11.69□□□□□ -0.54
SCN4A-201ENST00000435607 TMEM47Q9BQJ4 181 aa11.69□□□□□ -0.54
SCN4A-201ENST00000435607 DCTN4Q9UJW0 460 aa11.69□□□□□ -0.54
SCN4A-201ENST00000435607 TMCC3Q9ULS5 477 aa11.69□□□□□ -0.54
SCN4A-201ENST00000435607 ZMYM4Q5VZL5 1548 aa11.69□□□□□ -0.54
SCN4A-201ENST00000435607 ABCC2Q92887 1545 aa11.69□□□□□ -0.54
SCN4A-201ENST00000435607 BTNL9Q6UXG8 535 aa11.69□□□□□ -0.54
SCN4A-201ENST00000435607 NLRP9Q7RTR0 991 aa11.69□□□□□ -0.54
SCN4A-201ENST00000435607 ADGRF4Q8IZF3 695 aa11.69□□□□□ -0.54
SCN4A-201ENST00000435607 NSUN7Q8NE18 718 aaKnown RBP11.69□□□□□ -0.54
SCN4A-201ENST00000435607 TUBGCP3Q96CW5 907 aa11.69□□□□□ -0.54
SCN4A-201ENST00000435607 UBXN6Q9BZV1 441 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms