RNA–Protein interactions for RNA: ENST00000434472.6

CD44-210, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,634 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-210ENST00000434472 PHLDB2Q86SQ0 1253 aa11.05□□□□□ -0.64
CD44-210ENST00000434472 PASD1Q8IV76 773 aa11.05□□□□□ -0.64
CD44-210ENST00000434472 SUGP1Q8IWZ8 645 aaKnown RBP11.05□□□□□ -0.64
CD44-210ENST00000434472 RIBC1Q8N443 379 aaPredicted RBP11.05□□□□□ -0.64
CD44-210ENST00000434472 ZNF526Q8TF50 670 aaPredicted RBP11.05□□□□□ -0.64
CD44-210ENST00000434472 PRPF31Q8WWY3 499 aaKnown RBP11.05□□□□□ -0.64
CD44-210ENST00000434472 FAM84AQ96KN4 292 aa11.05□□□□□ -0.64
CD44-210ENST00000434472 ACO2Q99798 780 aaKnown RBP11.05□□□□□ -0.64
CD44-210ENST00000434472 CCDC113Q9H0I3 377 aa11.05□□□□□ -0.64
CD44-210ENST00000434472 GPRC5DQ9NZD1 345 aa11.05□□□□□ -0.64
CD44-210ENST00000434472 NINJ2Q9NZG7 142 aa11.05□□□□□ -0.64
CD44-210ENST00000434472 RGS17Q9UGC6 210 aaPredicted RBP11.05□□□□□ -0.64
CD44-210ENST00000434472 LGALS13Q9UHV8 139 aa11.05□□□□□ -0.64
CD44-210ENST00000434472 PCDHGC3Q9UN70 934 aa11.05□□□□□ -0.64
CD44-210ENST00000434472 DRG1Q9Y295 367 aaKnown RBP11.05□□□□□ -0.64
CD44-210ENST00000434472 SOWAHBA6NEL2 793 aa11.04□□□□□ -0.64
CD44-210ENST00000434472 MSCO60682 206 aa11.04□□□□□ -0.64
CD44-210ENST00000434472 LGR5O75473 907 aa11.04□□□□□ -0.64
CD44-210ENST00000434472 ZBTB7AO95365 584 aa11.04□□□□□ -0.64
CD44-210ENST00000434472 SLC25A27O95847 323 aa11.04□□□□□ -0.64
CD44-210ENST00000434472 TNNC2P02585 160 aa11.04□□□□□ -0.64
CD44-210ENST00000434472 KRT1P04264 644 aa11.04□□□□□ -0.64
CD44-210ENST00000434472 CFHP08603 1231 aa11.04□□□□□ -0.64
CD44-210ENST00000434472 ABHD2P08910 425 aa11.04□□□□□ -0.64
CD44-210ENST00000434472 HARSP12081 509 aaKnown RBP11.04□□□□□ -0.64
CD44-210ENST00000434472 EIF4BP23588 611 aaKnown RBP11.04□□□□□ -0.64
CD44-210ENST00000434472 POLR2BP30876 1174 aaKnown RBP11.04□□□□□ -0.64
CD44-210ENST00000434472 CDH5P33151 784 aaPredicted RBP11.04□□□□□ -0.64
CD44-210ENST00000434472 CHKAP35790 457 aa11.04□□□□□ -0.64
CD44-210ENST00000434472 TCF7P36402 384 aaPredicted RBP11.04□□□□□ -0.64
CD44-210ENST00000434472 MAPK6Q16659 721 aa11.04□□□□□ -0.64
CD44-210ENST00000434472 EAPPQ56P03 285 aaPredicted RBP11.04□□□□□ -0.64
CD44-210ENST00000434472 GSTA5Q7RTV2 222 aa11.04□□□□□ -0.64
CD44-210ENST00000434472 PLPPR4Q7Z2D5 763 aa11.04□□□□□ -0.64
CD44-210ENST00000434472 PIGWQ7Z7B1 504 aa11.04□□□□□ -0.64
CD44-210ENST00000434472 EXOC3L1Q86VI1 746 aa11.04□□□□□ -0.64
CD44-210ENST00000434472 NIPA2Q8N8Q9 360 aa11.04□□□□□ -0.64
CD44-210ENST00000434472 TRPM4Q8TD43 1214 aa11.04□□□□□ -0.64
CD44-210ENST00000434472 ARHGEF2Q92974 986 aaKnown RBP11.04□□□□□ -0.64
CD44-210ENST00000434472 TTC25Q96NG3 672 aa11.04□□□□□ -0.64
CD44-210ENST00000434472 SLITRK1Q96PX8 696 aa11.04□□□□□ -0.64
CD44-210ENST00000434472 HERPUD2Q9BSE4 406 aa11.04□□□□□ -0.64
CD44-210ENST00000434472 HEMGNQ9BXL5 484 aa11.04□□□□□ -0.64
CD44-210ENST00000434472 FRMD8P1Q9BZ68 369 aaPredicted RBP11.04□□□□□ -0.64
CD44-210ENST00000434472 STRIP2Q9ULQ0 834 aa11.04□□□□□ -0.64
CD44-210ENST00000434472 R3HDM2Q9Y2K5 976 aaKnown RBP11.04□□□□□ -0.64
CD44-210ENST00000434472 ACTL7BQ9Y614 415 aa11.04□□□□□ -0.64
CD44-210ENST00000434472 SNCAIPQ9Y6H5 919 aa11.04□□□□□ -0.64
CD44-210ENST00000434472 DOCK5Q9H7D0 1870 aa11.04□□□□□ -0.64
CD44-210ENST00000434472 LCTP09848 1927 aa11.04□□□□□ -0.64
CD44-210ENST00000434472 TP73O15350 636 aa11.03□□□□□ -0.64
CD44-210ENST00000434472 MED7O43513 233 aa11.03□□□□□ -0.64
CD44-210ENST00000434472 LIASO43766 372 aa11.03□□□□□ -0.64
CD44-210ENST00000434472 IL18RAPO95256 599 aa11.03□□□□□ -0.64
CD44-210ENST00000434472 ACSL3O95573 720 aa11.03□□□□□ -0.64
CD44-210ENST00000434472 KLRC2P26717 231 aa11.03□□□□□ -0.64
CD44-210ENST00000434472 RDXP35241 583 aaKnown RBP11.03□□□□□ -0.64
CD44-210ENST00000434472 SLCO1A2P46721 670 aa11.03□□□□□ -0.64
CD44-210ENST00000434472 SLC26A2P50443 739 aa11.03□□□□□ -0.64
CD44-210ENST00000434472 LAMTOR4Q0VGL1 99 aa11.03□□□□□ -0.64
CD44-210ENST00000434472 NR1H3Q13133 447 aa11.03□□□□□ -0.64
CD44-210ENST00000434472 ANKRD20A8PQ5CZ79 823 aa11.03□□□□□ -0.64
CD44-210ENST00000434472 HIBCHQ6NVY1 386 aaPredicted RBP11.03□□□□□ -0.64
CD44-210ENST00000434472 DCUN1D2Q6PH85 259 aa11.03□□□□□ -0.64
CD44-210ENST00000434472 SPOCD1Q6ZMY3 1216 aa11.03□□□□□ -0.64
CD44-210ENST00000434472 ZBTB33Q86T24 672 aa11.03□□□□□ -0.64
CD44-210ENST00000434472 ERICH1Q86X53 443 aa11.03□□□□□ -0.64
CD44-210ENST00000434472 NCAPG2Q86XI2 1143 aa11.03□□□□□ -0.64
CD44-210ENST00000434472 ZCCHC9Q8N567 271 aaKnown RBP11.03□□□□□ -0.64
CD44-210ENST00000434472 DYDC1Q8WWB3 177 aa11.03□□□□□ -0.64
CD44-210ENST00000434472 ANKRD36BP1Q96IX9 119 aa11.03□□□□□ -0.64
CD44-210ENST00000434472 CFAP57Q96MR6 1250 aa11.03□□□□□ -0.64
CD44-210ENST00000434472 PLCD4Q9BRC7 762 aa11.03□□□□□ -0.64
CD44-210ENST00000434472 DDX23Q9BUQ8 820 aaKnown RBP11.03□□□□□ -0.64
CD44-210ENST00000434472 SPATC1LQ9H0A9 340 aa11.03□□□□□ -0.64
CD44-210ENST00000434472 PPCSQ9HAB8 311 aa11.03□□□□□ -0.64
CD44-210ENST00000434472 CISHQ9NSE2 258 aa11.03□□□□□ -0.64
CD44-210ENST00000434472 BTBD7Q9P203 1132 aa11.03□□□□□ -0.64
CD44-210ENST00000434472 CPSF3Q9UKF6 684 aaKnown RBP11.03□□□□□ -0.64
CD44-210ENST00000434472 CSADQ9Y600 493 aa11.03□□□□□ -0.64
CD44-210ENST00000434472 A0A0G2JMZ2 1700 aa11.03□□□□□ -0.64
CD44-210ENST00000434472 WDR90Q96KV7 1748 aa11.02□□□□□ -0.64
CD44-210ENST00000434472 IGKV6-21A0A0C4DH24 114 aa11.02□□□□□ -0.64
CD44-210ENST00000434472 TCRBV5S1A1TA0A578 114 aa11.02□□□□□ -0.64
CD44-210ENST00000434472 CCT8L1PA6NM43 557 aa11.02□□□□□ -0.64
CD44-210ENST00000434472 DNALI1O14645 258 aaPredicted RBP11.02□□□□□ -0.64
CD44-210ENST00000434472 FAM189A1O60320 539 aa11.02□□□□□ -0.64
CD44-210ENST00000434472 CDH16O75309 829 aa11.02□□□□□ -0.64
CD44-210ENST00000434472 CST3P01034 146 aaPredicted RBP11.02□□□□□ -0.64
CD44-210ENST00000434472 EDN1P05305 212 aa11.02□□□□□ -0.64
CD44-210ENST00000434472 GSTA1P08263 222 aa11.02□□□□□ -0.64
CD44-210ENST00000434472 VIMP08670 466 aaKnown RBP11.02□□□□□ -0.64
CD44-210ENST00000434472 CD58P19256 250 aa11.02□□□□□ -0.64
CD44-210ENST00000434472 GJC1P36383 396 aa11.02□□□□□ -0.64
CD44-210ENST00000434472 TNFSF9P41273 254 aa11.02□□□□□ -0.64
CD44-210ENST00000434472 MYL6P60660 151 aa11.02□□□□□ -0.64
CD44-210ENST00000434472 IRX3P78415 501 aaPredicted RBP11.02□□□□□ -0.64
CD44-210ENST00000434472 MKRN3Q13064 507 aaKnown RBP11.02□□□□□ -0.64
CD44-210ENST00000434472 TRIP13Q15645 432 aaPredicted RBP11.02□□□□□ -0.64
CD44-210ENST00000434472 KYNUQ16719 465 aa11.02□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms