RNA–Protein interactions for RNA: ENST00000433661.1

PTP4A1P3-201, Transcript of protein tyrosine phosphatase type IVA, member 1 pseudogene 3, humanhuman

BASIC

Gene PTP4A1P3, Length 420 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1P3-201ENST00000433661 CAPN11Q9UMQ6 739 aa6.33□□□□□ -1.4
PTP4A1P3-201ENST00000433661 APOL1O14791 398 aa6.32□□□□□ -1.4
PTP4A1P3-201ENST00000433661 CYP2C9P11712 490 aa6.32□□□□□ -1.4
PTP4A1P3-201ENST00000433661 XRCC6P12956 609 aaKnown RBP eCLIP6.32□□□□□ -1.4
PTP4A1P3-201ENST00000433661 KCNJ5P48544 419 aa6.32□□□□□ -1.4
PTP4A1P3-201ENST00000433661 SLC11A2P49281 568 aa6.32□□□□□ -1.4
PTP4A1P3-201ENST00000433661 SLFN5Q08AF3 891 aa6.32□□□□□ -1.4
PTP4A1P3-201ENST00000433661 CHAF1AQ13111 956 aaPredicted RBP6.32□□□□□ -1.4
PTP4A1P3-201ENST00000433661 CTBP1Q13363 440 aa6.32□□□□□ -1.4
PTP4A1P3-201ENST00000433661 ZRSR2Q15696 482 aaKnown RBP6.32□□□□□ -1.4
PTP4A1P3-201ENST00000433661 AGAP9Q5VTM2 703 aa6.32□□□□□ -1.4
PTP4A1P3-201ENST00000433661 HIBCHQ6NVY1 386 aaPredicted RBP6.32□□□□□ -1.4
PTP4A1P3-201ENST00000433661 BEND5Q7L4P6 421 aa6.32□□□□□ -1.4
PTP4A1P3-201ENST00000433661 USP37Q86T82 979 aa6.32□□□□□ -1.4
PTP4A1P3-201ENST00000433661 GAS2L3Q86XJ1 694 aa6.32□□□□□ -1.4
PTP4A1P3-201ENST00000433661 XYLT1Q86Y38 959 aa6.32□□□□□ -1.4
PTP4A1P3-201ENST00000433661 RHOT2Q8IXI1 618 aa6.32□□□□□ -1.4
PTP4A1P3-201ENST00000433661 FANCBQ8NB91 859 aa6.32□□□□□ -1.4
PTP4A1P3-201ENST00000433661 SYT8Q8NBV8 401 aa6.32□□□□□ -1.4
PTP4A1P3-201ENST00000433661 TMIEQ8NEW7 156 aa6.32□□□□□ -1.4
PTP4A1P3-201ENST00000433661 TEPSINQ96N21 525 aa6.32□□□□□ -1.4
PTP4A1P3-201ENST00000433661 HERPUD2Q9BSE4 406 aa6.32□□□□□ -1.4
PTP4A1P3-201ENST00000433661 CNPPD1Q9BV87 410 aa6.32□□□□□ -1.4
PTP4A1P3-201ENST00000433661 EPC1Q9H2F5 836 aa6.32□□□□□ -1.4
PTP4A1P3-201ENST00000433661 DHX36Q9H2U1 1008 aaKnown RBP6.32□□□□□ -1.4
PTP4A1P3-201ENST00000433661 ZFR2Q9UPR6 939 aaKnown RBP6.32□□□□□ -1.4
PTP4A1P3-201ENST00000433661 LRCH1Q9Y2L9 728 aa6.32□□□□□ -1.4
PTP4A1P3-201ENST00000433661 CDHR4A6H8M9 788 aa6.31□□□□□ -1.4
PTP4A1P3-201ENST00000433661 NPEPPSL1A6NEC2 478 aa6.31□□□□□ -1.4
PTP4A1P3-201ENST00000433661 E7ENX8 843 aa6.31□□□□□ -1.4
PTP4A1P3-201ENST00000433661 E9PLN8 166 aa6.31□□□□□ -1.4
PTP4A1P3-201ENST00000433661 ADAMTS3O15072 1205 aa6.31□□□□□ -1.4
PTP4A1P3-201ENST00000433661 CYP27B1O15528 508 aa6.31□□□□□ -1.4
PTP4A1P3-201ENST00000433661 GPR42O15529 346 aa6.31□□□□□ -1.4
PTP4A1P3-201ENST00000433661 NCK2O43639 380 aa6.31□□□□□ -1.4
PTP4A1P3-201ENST00000433661 PLA2G6O60733 806 aa6.31□□□□□ -1.4
PTP4A1P3-201ENST00000433661 AGFG2O95081 481 aa6.31□□□□□ -1.4
PTP4A1P3-201ENST00000433661 MT-ND5P03915 603 aa6.31□□□□□ -1.4
PTP4A1P3-201ENST00000433661 CKBP12277 381 aa6.31□□□□□ -1.4
PTP4A1P3-201ENST00000433661 IL1R1P14778 569 aa6.31□□□□□ -1.4
PTP4A1P3-201ENST00000433661 FGFR2P21802 821 aa6.31□□□□□ -1.4
PTP4A1P3-201ENST00000433661 CNR2P34972 360 aa6.31□□□□□ -1.4
PTP4A1P3-201ENST00000433661 RPS16P62249 146 aaKnown RBP6.31□□□□□ -1.4
PTP4A1P3-201ENST00000433661 TNFAIP2Q03169 654 aa6.31□□□□□ -1.4
PTP4A1P3-201ENST00000433661 TAP2Q03519 686 aa6.31□□□□□ -1.4
PTP4A1P3-201ENST00000433661 TMEM95Q3KNT9 176 aa6.31□□□□□ -1.4
PTP4A1P3-201ENST00000433661 INO80DQ53TQ3 878 aaPredicted RBP6.31□□□□□ -1.4
PTP4A1P3-201ENST00000433661 FAM102AQ5T9C2 384 aaPredicted RBP6.31□□□□□ -1.4
PTP4A1P3-201ENST00000433661 FAM160B1Q5W0V3 765 aa6.31□□□□□ -1.4
PTP4A1P3-201ENST00000433661 SPOCD1Q6ZMY3 1216 aa6.31□□□□□ -1.4
PTP4A1P3-201ENST00000433661 TMPRSS9Q7Z410 1059 aa6.31□□□□□ -1.4
PTP4A1P3-201ENST00000433661 MYLK4Q86YV6 388 aaPredicted RBP6.31□□□□□ -1.4
PTP4A1P3-201ENST00000433661 SYT12Q8IV01 421 aa6.31□□□□□ -1.4
PTP4A1P3-201ENST00000433661 NKAPQ8N5F7 415 aaKnown RBP6.31□□□□□ -1.4
PTP4A1P3-201ENST00000433661 VGLL2Q8N8G2 317 aa6.31□□□□□ -1.4
PTP4A1P3-201ENST00000433661 IPCEF1Q8WWN9 437 aaPredicted RBP6.31□□□□□ -1.4
PTP4A1P3-201ENST00000433661 EDAQ92838 391 aa6.31□□□□□ -1.4
PTP4A1P3-201ENST00000433661 KIAA1191Q96A73 305 aa6.31□□□□□ -1.4
PTP4A1P3-201ENST00000433661 SNX22Q96L94 193 aa6.31□□□□□ -1.4
PTP4A1P3-201ENST00000433661 MOGAT1Q96PD6 335 aa6.31□□□□□ -1.4
PTP4A1P3-201ENST00000433661 OR14A2Q96R54 314 aa6.31□□□□□ -1.4
PTP4A1P3-201ENST00000433661 RBM15Q96T37 977 aaKnown RBP eCLIP6.31□□□□□ -1.4
PTP4A1P3-201ENST00000433661 VKORC1Q9BQB6 163 aa6.31□□□□□ -1.4
PTP4A1P3-201ENST00000433661 TTLL2Q9BWV7 592 aa6.31□□□□□ -1.4
PTP4A1P3-201ENST00000433661 STK33Q9BYT3 514 aa6.31□□□□□ -1.4
PTP4A1P3-201ENST00000433661 CNOT11Q9UKZ1 510 aaKnown RBP6.31□□□□□ -1.4
PTP4A1P3-201ENST00000433661 SLC45A2Q9UMX9 530 aa6.31□□□□□ -1.4
PTP4A1P3-201ENST00000433661 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.31□□□□□ -1.4
PTP4A1P3-201ENST00000433661 ZNF785A8K8V0 405 aa6.3□□□□□ -1.4
PTP4A1P3-201ENST00000433661 PYCARD-AS1I3L0S3 204 aa6.3□□□□□ -1.4
PTP4A1P3-201ENST00000433661 HNRNPDLO14979 420 aaKnown RBP6.3□□□□□ -1.4
PTP4A1P3-201ENST00000433661 CCP110O43303 1012 aa6.3□□□□□ -1.4
PTP4A1P3-201ENST00000433661 KCNQ3O43525 872 aa6.3□□□□□ -1.4
PTP4A1P3-201ENST00000433661 FOXS1O43638 330 aa6.3□□□□□ -1.4
PTP4A1P3-201ENST00000433661 CREB3O43889 395 aa6.3□□□□□ -1.4
PTP4A1P3-201ENST00000433661 SOAT2O75908 522 aa6.3□□□□□ -1.4
PTP4A1P3-201ENST00000433661 UNC5CO95185 931 aa6.3□□□□□ -1.4
PTP4A1P3-201ENST00000433661 FOSP01100 380 aaPredicted RBP6.3□□□□□ -1.4
PTP4A1P3-201ENST00000433661 GRPP07492 148 aa6.3□□□□□ -1.4
PTP4A1P3-201ENST00000433661 TXNP10599 105 aaKnown RBP6.3□□□□□ -1.4
PTP4A1P3-201ENST00000433661 MSX2P35548 267 aaPredicted RBP6.3□□□□□ -1.4
PTP4A1P3-201ENST00000433661 ZNF135P52742 658 aaPredicted RBP6.3□□□□□ -1.4
PTP4A1P3-201ENST00000433661 PTTG1IPP53801 180 aa6.3□□□□□ -1.4
PTP4A1P3-201ENST00000433661 RAP2BP61225 183 aa6.3□□□□□ -1.4
PTP4A1P3-201ENST00000433661 PIGFQ07326 219 aa6.3□□□□□ -1.4
PTP4A1P3-201ENST00000433661 SLC35G1Q2M3R5 365 aa6.3□□□□□ -1.4
PTP4A1P3-201ENST00000433661 AMOTQ4VCS5 1084 aa6.3□□□□□ -1.4
PTP4A1P3-201ENST00000433661 CRB2Q5IJ48 1285 aa6.3□□□□□ -1.4
PTP4A1P3-201ENST00000433661 C3orf38Q5JPI3 329 aa6.3□□□□□ -1.4
PTP4A1P3-201ENST00000433661 SPTY2D1Q68D10 685 aaPredicted RBP6.3□□□□□ -1.4
PTP4A1P3-201ENST00000433661 Q6ZSN1 163 aa6.3□□□□□ -1.4
PTP4A1P3-201ENST00000433661 KRT28Q7Z3Y7 464 aa6.3□□□□□ -1.4
PTP4A1P3-201ENST00000433661 CIR1Q86X95 450 aaPredicted RBP6.3□□□□□ -1.4
PTP4A1P3-201ENST00000433661 D2HGDHQ8N465 521 aa6.3□□□□□ -1.4
PTP4A1P3-201ENST00000433661 POF1BQ8WVV4 589 aa6.3□□□□□ -1.4
PTP4A1P3-201ENST00000433661 ATXN2LQ8WWM7 1075 aaKnown RBP6.3□□□□□ -1.4
PTP4A1P3-201ENST00000433661 IQCDQ96DY2 449 aa6.3□□□□□ -1.4
PTP4A1P3-201ENST00000433661 GNRHR2Q96P88 292 aa6.3□□□□□ -1.4
PTP4A1P3-201ENST00000433661 MED15Q96RN5 788 aa6.3□□□□□ -1.4
PTP4A1P3-201ENST00000433661 VPS11Q9H270 941 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms