RNA–Protein interactions for RNA: ENST00000431918.1

CLDN4-202, Transcript of claudin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLDN4, Length 4,108 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-202ENST00000431918 EPS8L3Q8TE67 593 aaKnown RBP12.08□□□□□ -0.48
CLDN4-202ENST00000431918 SENP7Q9BQF6 1050 aa12.08□□□□□ -0.48
CLDN4-202ENST00000431918 FDXACB1Q9BRP7 624 aaPredicted RBP12.08□□□□□ -0.48
CLDN4-202ENST00000431918 FHDC1Q9C0D6 1143 aaPredicted RBP12.08□□□□□ -0.48
CLDN4-202ENST00000431918 ST6GALNAC4Q9H4F1 302 aa12.08□□□□□ -0.48
CLDN4-202ENST00000431918 HOMER3Q9NSC5 361 aa12.08□□□□□ -0.48
CLDN4-202ENST00000431918 CPSF2Q9P2I0 782 aaKnown RBP12.08□□□□□ -0.48
CLDN4-202ENST00000431918 NOCTQ9UK39 431 aaKnown RBP12.08□□□□□ -0.48
CLDN4-202ENST00000431918 KRT3P12035 628 aa12.08□□□□□ -0.48
CLDN4-202ENST00000431918 MAN1A1P33908 653 aa12.08□□□□□ -0.48
CLDN4-202ENST00000431918 ITGA8P53708 1063 aa12.08□□□□□ -0.48
CLDN4-202ENST00000431918 ATP11AP98196 1134 aa12.08□□□□□ -0.48
CLDN4-202ENST00000431918 DCAF12L1Q5VU92 463 aa12.08□□□□□ -0.48
CLDN4-202ENST00000431918 IQCKQ8N0W5 287 aa12.08□□□□□ -0.48
CLDN4-202ENST00000431918 EMC1Q8N766 993 aa12.08□□□□□ -0.48
CLDN4-202ENST00000431918 ZNF516Q92618 1163 aa12.08□□□□□ -0.48
CLDN4-202ENST00000431918 KIF12Q96FN5 646 aa12.08□□□□□ -0.48
CLDN4-202ENST00000431918 UBXN6Q9BZV1 441 aa12.08□□□□□ -0.48
CLDN4-202ENST00000431918 HESX1Q9UBX0 185 aa12.08□□□□□ -0.48
CLDN4-202ENST00000431918 POLIQ9UNA4 740 aa12.08□□□□□ -0.48
CLDN4-202ENST00000431918 SOWAHBA6NEL2 793 aa12.08□□□□□ -0.48
CLDN4-202ENST00000431918 MED7O43513 233 aa12.08□□□□□ -0.48
CLDN4-202ENST00000431918 ZC3H11AO75152 810 aaKnown RBP eCLIP12.08□□□□□ -0.48
CLDN4-202ENST00000431918 TJP3O95049 919 aa12.08□□□□□ -0.48
CLDN4-202ENST00000431918 CST3P01034 146 aaPredicted RBP12.08□□□□□ -0.48
CLDN4-202ENST00000431918 FAM102AQ5T9C2 384 aaPredicted RBP12.08□□□□□ -0.48
CLDN4-202ENST00000431918 SLFN11Q7Z7L1 901 aa12.08□□□□□ -0.48
CLDN4-202ENST00000431918 CEP57Q86XR8 500 aa12.08□□□□□ -0.48
CLDN4-202ENST00000431918 EXOC8Q8IYI6 725 aa12.08□□□□□ -0.48
CLDN4-202ENST00000431918 OR6B3Q8NGW1 331 aa12.08□□□□□ -0.48
CLDN4-202ENST00000431918 ATL2Q8NHH9 583 aa12.08□□□□□ -0.48
CLDN4-202ENST00000431918 AFG1LQ8WV93 481 aa12.08□□□□□ -0.48
CLDN4-202ENST00000431918 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.08□□□□□ -0.48
CLDN4-202ENST00000431918 CCT8L2Q96SF2 557 aa12.08□□□□□ -0.48
CLDN4-202ENST00000431918 TMBIM4Q9HC24 238 aa12.08□□□□□ -0.48
CLDN4-202ENST00000431918 ERAP1Q9NZ08 941 aa12.08□□□□□ -0.48
CLDN4-202ENST00000431918 PCDHA3Q9Y5H8 950 aa12.08□□□□□ -0.48
CLDN4-202ENST00000431918 INSRRP14616 1297 aa12.07□□□□□ -0.48
CLDN4-202ENST00000431918 ATP5DP30049 168 aa12.07□□□□□ -0.48
CLDN4-202ENST00000431918 SLC1A1P43005 524 aa12.07□□□□□ -0.48
CLDN4-202ENST00000431918 FAM47CQ5HY64 1035 aa12.07□□□□□ -0.48
CLDN4-202ENST00000431918 C6orf118Q5T5N4 469 aa12.07□□□□□ -0.48
CLDN4-202ENST00000431918 SRRM1Q8IYB3 904 aaKnown RBP12.07□□□□□ -0.48
CLDN4-202ENST00000431918 CDCA5Q96FF9 252 aa12.07□□□□□ -0.48
CLDN4-202ENST00000431918 THOC1Q96FV9 657 aaKnown RBP12.07□□□□□ -0.48
CLDN4-202ENST00000431918 SNF8Q96H20 258 aa12.07□□□□□ -0.48
CLDN4-202ENST00000431918 PPP2R3BQ9Y5P8 575 aa12.07□□□□□ -0.48
CLDN4-202ENST00000431918 MAPK13O15264 365 aa12.07□□□□□ -0.48
CLDN4-202ENST00000431918 HBP1O60381 514 aa12.07□□□□□ -0.48
CLDN4-202ENST00000431918 ADCY2Q08462 1091 aa12.07□□□□□ -0.48
CLDN4-202ENST00000431918 BSPRYQ5W0U4 402 aa12.07□□□□□ -0.48
CLDN4-202ENST00000431918 EEF1DP3Q658K8 133 aa12.07□□□□□ -0.48
CLDN4-202ENST00000431918 FAM149B1Q96BN6 582 aa12.07□□□□□ -0.48
CLDN4-202ENST00000431918 RBM41Q96IZ5 413 aaKnown RBP12.07□□□□□ -0.48
CLDN4-202ENST00000431918 PABPC3Q9H361 631 aaKnown RBP12.07□□□□□ -0.48
CLDN4-202ENST00000431918 COL11A2P13942 1736 aaPredicted RBP12.07□□□□□ -0.48
CLDN4-202ENST00000431918 GMNCA6NCL1 334 aa12.07□□□□□ -0.48
CLDN4-202ENST00000431918 ASB14A6NK59 587 aa12.07□□□□□ -0.48
CLDN4-202ENST00000431918 SHBGP04278 402 aa12.07□□□□□ -0.48
CLDN4-202ENST00000431918 ARSEP51690 589 aa12.07□□□□□ -0.48
CLDN4-202ENST00000431918 CORO7P57737 925 aa12.07□□□□□ -0.48
CLDN4-202ENST00000431918 P3H1Q32P28 736 aa12.07□□□□□ -0.48
CLDN4-202ENST00000431918 BBS9Q3SYG4 887 aa12.07□□□□□ -0.48
CLDN4-202ENST00000431918 PPP6R3Q5H9R7 873 aaPredicted RBP12.07□□□□□ -0.48
CLDN4-202ENST00000431918 GLRA4Q5JXX5 417 aa12.07□□□□□ -0.48
CLDN4-202ENST00000431918 AP1ARQ63HQ0 302 aa12.07□□□□□ -0.48
CLDN4-202ENST00000431918 MAP1SQ66K74 1059 aaPredicted RBP12.07□□□□□ -0.48
CLDN4-202ENST00000431918 LRIG3Q6UXM1 1119 aa12.07□□□□□ -0.48
CLDN4-202ENST00000431918 ZNF572Q7Z3I7 529 aaPredicted RBP12.07□□□□□ -0.48
CLDN4-202ENST00000431918 CROCCP2Q86T23 111 aa12.07□□□□□ -0.48
CLDN4-202ENST00000431918 ARHGEF2Q92974 986 aaKnown RBP12.07□□□□□ -0.48
CLDN4-202ENST00000431918 MIS12Q9H081 205 aa12.07□□□□□ -0.48
CLDN4-202ENST00000431918 COL2A1P02458 1487 aaPredicted RBP12.07□□□□□ -0.48
CLDN4-202ENST00000431918 DYNC1LI2O43237 492 aaPredicted RBP12.06□□□□□ -0.48
CLDN4-202ENST00000431918 PROSCO94903 275 aa12.06□□□□□ -0.48
CLDN4-202ENST00000431918 CFHP08603 1231 aa12.06□□□□□ -0.48
CLDN4-202ENST00000431918 RPL7AP62424 266 aaKnown RBP12.06□□□□□ -0.48
CLDN4-202ENST00000431918 SNAPC2Q13487 334 aa12.06□□□□□ -0.48
CLDN4-202ENST00000431918 ZNF677Q86XU0 584 aa12.06□□□□□ -0.48
CLDN4-202ENST00000431918 CTAGE3PQ8IX95 158 aa12.06□□□□□ -0.48
CLDN4-202ENST00000431918 PALM2Q8IXS6 379 aa12.06□□□□□ -0.48
CLDN4-202ENST00000431918 PWWP2AQ96N64 755 aa12.06□□□□□ -0.48
CLDN4-202ENST00000431918 FAM49BQ9NUQ9 324 aa12.06□□□□□ -0.48
CLDN4-202ENST00000431918 STXBP5LQ9Y2K9 1186 aa12.06□□□□□ -0.48
CLDN4-202ENST00000431918 EXOC1LA0A1B0GW35 172 aa12.06□□□□□ -0.48
CLDN4-202ENST00000431918 TGFB3P10600 412 aa12.06□□□□□ -0.48
CLDN4-202ENST00000431918 EPHX2P34913 555 aa12.06□□□□□ -0.48
CLDN4-202ENST00000431918 MAP3K10Q02779 954 aa12.06□□□□□ -0.48
CLDN4-202ENST00000431918 KCNV1Q6PIU1 500 aa12.06□□□□□ -0.48
CLDN4-202ENST00000431918 MPZL3Q6UWV2 235 aa12.06□□□□□ -0.48
CLDN4-202ENST00000431918 ZC3H18Q86VM9 953 aaKnown RBP12.06□□□□□ -0.48
CLDN4-202ENST00000431918 BRSK2Q8IWQ3 736 aa12.06□□□□□ -0.48
CLDN4-202ENST00000431918 RASGEF1CQ8N431 466 aa12.06□□□□□ -0.48
CLDN4-202ENST00000431918 N4BP2L2Q92802 583 aaPredicted RBP12.06□□□□□ -0.48
CLDN4-202ENST00000431918 ELAC2Q9BQ52 826 aaKnown RBP12.06□□□□□ -0.48
CLDN4-202ENST00000431918 NTPCRQ9BSD7 190 aaKnown RBP12.06□□□□□ -0.48
CLDN4-202ENST00000431918 DHX33Q9H6R0 707 aaKnown RBP12.06□□□□□ -0.48
CLDN4-202ENST00000431918 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.06□□□□□ -0.48
CLDN4-202ENST00000431918 SNX9Q9Y5X1 595 aa12.06□□□□□ -0.48
CLDN4-202ENST00000431918 CCL15-CCL14A0A0B4J2E2 113 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms