RNA–Protein interactions for RNA: ENST00000430976.5

PTPN4-203, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 5

Gene PTPN4, Length 4,154 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-203ENST00000430976 EXD1Q8NHP7 514 aa5.64□□□□□ -1.51
PTPN4-203ENST00000430976 GANCQ8TET4 914 aa5.64□□□□□ -1.51
PTPN4-203ENST00000430976 ATP8B4Q8TF62 1192 aa5.64□□□□□ -1.51
PTPN4-203ENST00000430976 HEXDCQ8WVB3 486 aa5.64□□□□□ -1.51
PTPN4-203ENST00000430976 METTL21AQ8WXB1 218 aa5.64□□□□□ -1.51
PTPN4-203ENST00000430976 ART5Q96L15 291 aa5.64□□□□□ -1.51
PTPN4-203ENST00000430976 EYA3Q99504 573 aa5.64□□□□□ -1.51
PTPN4-203ENST00000430976 GCOM2Q9BZD3 368 aaPredicted RBP5.64□□□□□ -1.51
PTPN4-203ENST00000430976 PITHD1Q9GZP4 211 aaPredicted RBP5.64□□□□□ -1.51
PTPN4-203ENST00000430976 ZSCAN32Q9NX65 697 aa5.64□□□□□ -1.51
PTPN4-203ENST00000430976 PRKAG3Q9UGI9 489 aa5.64□□□□□ -1.51
PTPN4-203ENST00000430976 CAPN9O14815 690 aa5.63□□□□□ -1.51
PTPN4-203ENST00000430976 CRTAPO75718 401 aaPredicted RBP5.63□□□□□ -1.51
PTPN4-203ENST00000430976 EOMESO95936 686 aa5.63□□□□□ -1.51
PTPN4-203ENST00000430976 UMPSP11172 480 aa5.63□□□□□ -1.51
PTPN4-203ENST00000430976 ABCB4P21439 1286 aa5.63□□□□□ -1.51
PTPN4-203ENST00000430976 GSTT1P30711 240 aa5.63□□□□□ -1.51
PTPN4-203ENST00000430976 TAGLN2P37802 199 aaKnown RBP5.63□□□□□ -1.51
PTPN4-203ENST00000430976 ARFIP2P53365 341 aa5.63□□□□□ -1.51
PTPN4-203ENST00000430976 POLGP54098 1239 aaPredicted RBP5.63□□□□□ -1.51
PTPN4-203ENST00000430976 NLRP11P59045 1033 aaKnown RBP5.63□□□□□ -1.51
PTPN4-203ENST00000430976 CAMK2DQ13557 499 aa5.63□□□□□ -1.51
PTPN4-203ENST00000430976 NFYCQ13952 458 aa5.63□□□□□ -1.51
PTPN4-203ENST00000430976 SYT16Q17RD7 645 aa5.63□□□□□ -1.51
PTPN4-203ENST00000430976 GNASQ5JWF2 1037 aa5.63□□□□□ -1.51
PTPN4-203ENST00000430976 RTP2Q5QGT7 225 aa5.63□□□□□ -1.51
PTPN4-203ENST00000430976 MACC1Q6ZN28 852 aa5.63□□□□□ -1.51
PTPN4-203ENST00000430976 TMTC3Q6ZXV5 915 aa5.63□□□□□ -1.51
PTPN4-203ENST00000430976 GALNT12Q8IXK2 581 aa5.63□□□□□ -1.51
PTPN4-203ENST00000430976 ANKRD52Q8NB46 1076 aa5.63□□□□□ -1.51
PTPN4-203ENST00000430976 KCTD6Q8NC69 237 aa5.63□□□□□ -1.51
PTPN4-203ENST00000430976 PKP4Q99569 1192 aa5.63□□□□□ -1.51
PTPN4-203ENST00000430976 POLD4Q9HCU8 107 aa5.63□□□□□ -1.51
PTPN4-203ENST00000430976 PIH1D3Q9NQM4 214 aaKnown RBP5.63□□□□□ -1.51
PTPN4-203ENST00000430976 SETD4Q9NVD3 440 aa5.63□□□□□ -1.51
PTPN4-203ENST00000430976 CCDC87Q9NVE4 849 aa5.63□□□□□ -1.51
PTPN4-203ENST00000430976 SELENONQ9NZV5 590 aa5.63□□□□□ -1.51
PTPN4-203ENST00000430976 ORC3Q9UBD5 711 aaPredicted RBP5.63□□□□□ -1.51
PTPN4-203ENST00000430976 NAALAD2Q9Y3Q0 740 aa5.63□□□□□ -1.51
PTPN4-203ENST00000430976 HCN4Q9Y3Q4 1203 aa5.63□□□□□ -1.51
PTPN4-203ENST00000430976 ERCC6Q03468 1493 aa5.63□□□□□ -1.51
PTPN4-203ENST00000430976 PDLIM1O00151 329 aa5.63□□□□□ -1.51
PTPN4-203ENST00000430976 GMFGO60234 142 aa5.63□□□□□ -1.51
PTPN4-203ENST00000430976 DTNBO60941 627 aa5.63□□□□□ -1.51
PTPN4-203ENST00000430976 PHF2O75151 1096 aa5.63□□□□□ -1.51
PTPN4-203ENST00000430976 ZBTB48P10074 688 aaPredicted RBP5.63□□□□□ -1.51
PTPN4-203ENST00000430976 RAG1P15918 1043 aa5.63□□□□□ -1.51
PTPN4-203ENST00000430976 H2AFXP16104 143 aaPredicted RBP5.63□□□□□ -1.51
PTPN4-203ENST00000430976 TNNI3P19429 210 aa5.63□□□□□ -1.51
PTPN4-203ENST00000430976 PPP3CCP48454 512 aa5.63□□□□□ -1.51
PTPN4-203ENST00000430976 GMFBP60983 142 aa5.63□□□□□ -1.51
PTPN4-203ENST00000430976 SERINC3Q13530 473 aa5.63□□□□□ -1.51
PTPN4-203ENST00000430976 RFTN1Q14699 578 aaPredicted RBP5.63□□□□□ -1.51
PTPN4-203ENST00000430976 ARID5BQ14865 1188 aa5.63□□□□□ -1.51
PTPN4-203ENST00000430976 MORF4L2Q15014 288 aa5.63□□□□□ -1.51
PTPN4-203ENST00000430976 IFI16Q16666 785 aaKnown RBP5.63□□□□□ -1.51
PTPN4-203ENST00000430976 ZCWPW2Q504Y3 356 aa5.63□□□□□ -1.51
PTPN4-203ENST00000430976 RPS26P11Q5JNZ5 115 aaPredicted RBP5.63□□□□□ -1.51
PTPN4-203ENST00000430976 HEATR6Q6AI08 1181 aaKnown RBP5.63□□□□□ -1.51
PTPN4-203ENST00000430976 ANKRD40Q6AI12 368 aa5.63□□□□□ -1.51
PTPN4-203ENST00000430976 LHFPL2Q6ZUX7 228 aa5.63□□□□□ -1.51
PTPN4-203ENST00000430976 FAM83AQ86UY5 434 aa5.63□□□□□ -1.51
PTPN4-203ENST00000430976 HID1Q8IV36 788 aa5.63□□□□□ -1.51
PTPN4-203ENST00000430976 KDM1BQ8NB78 822 aa5.63□□□□□ -1.51
PTPN4-203ENST00000430976 RDM1Q8NG50 284 aa5.63□□□□□ -1.51
PTPN4-203ENST00000430976 PRR7Q8TB68 274 aa5.63□□□□□ -1.51
PTPN4-203ENST00000430976 CRELD1Q96HD1 420 aa5.63□□□□□ -1.51
PTPN4-203ENST00000430976 CCDC74BQ96LY2 380 aa5.63□□□□□ -1.51
PTPN4-203ENST00000430976 TUBGCP2Q9BSJ2 902 aa5.63□□□□□ -1.51
PTPN4-203ENST00000430976 GBA3Q9H227 469 aa5.63□□□□□ -1.51
PTPN4-203ENST00000430976 GORASP2Q9H8Y8 452 aa5.63□□□□□ -1.51
PTPN4-203ENST00000430976 ITM2CQ9NQX7 267 aa5.63□□□□□ -1.51
PTPN4-203ENST00000430976 AURKCQ9UQB9 309 aa5.63□□□□□ -1.51
PTPN4-203ENST00000430976 INVSQ9Y283 1065 aa5.63□□□□□ -1.51
PTPN4-203ENST00000430976 TRBV23OR9-2A0A075B6M9 112 aa5.63□□□□□ -1.51
PTPN4-203ENST00000430976 DCDC2CA8MYV0 355 aa5.63□□□□□ -1.51
PTPN4-203ENST00000430976 ATP6V1G2-DDX39BF2Z307 99 aa5.63□□□□□ -1.51
PTPN4-203ENST00000430976 TEX46H3BTG2 121 aa5.63□□□□□ -1.51
PTPN4-203ENST00000430976 NDUFS8O00217 210 aa5.63□□□□□ -1.51
PTPN4-203ENST00000430976 BUB1O43683 1085 aa5.63□□□□□ -1.51
PTPN4-203ENST00000430976 GABBR2O75899 941 aa5.63□□□□□ -1.51
PTPN4-203ENST00000430976 USP1O94782 785 aa5.63□□□□□ -1.51
PTPN4-203ENST00000430976 NCF1P14598 390 aaPredicted RBP5.63□□□□□ -1.51
PTPN4-203ENST00000430976 ADH7P40394 386 aa5.63□□□□□ -1.51
PTPN4-203ENST00000430976 ACADSBP45954 432 aa5.63□□□□□ -1.51
PTPN4-203ENST00000430976 CLCN4P51793 760 aa5.63□□□□□ -1.51
PTPN4-203ENST00000430976 NR5A1Q13285 461 aa5.63□□□□□ -1.51
PTPN4-203ENST00000430976 CTC1Q2NKJ3 1217 aa5.63□□□□□ -1.51
PTPN4-203ENST00000430976 SGO2Q562F6 1265 aa5.63□□□□□ -1.51
PTPN4-203ENST00000430976 BMP2KLQ5H9B9 411 aa5.63□□□□□ -1.51
PTPN4-203ENST00000430976 PYHIN1Q6K0P9 492 aa5.63□□□□□ -1.51
PTPN4-203ENST00000430976 HHIPL2Q6UWX4 724 aa5.63□□□□□ -1.51
PTPN4-203ENST00000430976 ATG14Q6ZNE5 492 aa5.63□□□□□ -1.51
PTPN4-203ENST00000430976 BBS7Q8IWZ6 715 aa5.63□□□□□ -1.51
PTPN4-203ENST00000430976 CAPSLQ8WWF8 208 aa5.63□□□□□ -1.51
PTPN4-203ENST00000430976 TAMM41Q96BW9 452 aa5.63□□□□□ -1.51
PTPN4-203ENST00000430976 RMDN3Q96TC7 470 aa5.63□□□□□ -1.51
PTPN4-203ENST00000430976 ZCCHC2Q9C0B9 1178 aaKnown RBP5.63□□□□□ -1.51
PTPN4-203ENST00000430976 XRN2Q9H0D6 950 aaKnown RBP eCLIP5.63□□□□□ -1.511e-6■■■■□ 24.8
PTPN4-203ENST00000430976 NCOA5Q9HCD5 579 aaKnown RBP5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms