RNA–Protein interactions for RNA: ENST00000429846.1

MSH5-208, Transcript of mutS homolog 5, humanhuman

TSL 3

Gene MSH5, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-208ENST00000429846 MTMR11A4FU01 709 aa16.15■□□□□ 0.18
MSH5-208ENST00000429846 SHISA7A6NL88 538 aa16.15■□□□□ 0.18
MSH5-208ENST00000429846 VNN2O95498 520 aa16.15■□□□□ 0.18
MSH5-208ENST00000429846 FGF19O95750 216 aa16.15■□□□□ 0.18
MSH5-208ENST00000429846 GDI1P31150 447 aa16.15■□□□□ 0.18
MSH5-208ENST00000429846 ALDH1A3P47895 512 aa16.15■□□□□ 0.18
MSH5-208ENST00000429846 MLLT6P55198 1093 aaPredicted RBP16.15■□□□□ 0.18
MSH5-208ENST00000429846 LILRA4P59901 499 aa16.15■□□□□ 0.18
MSH5-208ENST00000429846 POU5F1Q01860 360 aaKnown RBP16.15■□□□□ 0.18
MSH5-208ENST00000429846 CSTF1Q05048 431 aaKnown RBP16.15■□□□□ 0.18
MSH5-208ENST00000429846 DHX8Q14562 1220 aaKnown RBP16.15■□□□□ 0.18
MSH5-208ENST00000429846 MCM6Q14566 821 aa16.15■□□□□ 0.18
MSH5-208ENST00000429846 TMEM132DQ14C87 1099 aa16.15■□□□□ 0.18
MSH5-208ENST00000429846 KARSQ15046 597 aaKnown RBP16.15■□□□□ 0.18
MSH5-208ENST00000429846 TEAD2Q15562 447 aa16.15■□□□□ 0.18
MSH5-208ENST00000429846 JADE1Q6IE81 842 aa16.15■□□□□ 0.18
MSH5-208ENST00000429846 SLFN12LQ6IEE8 588 aa16.15■□□□□ 0.18
MSH5-208ENST00000429846 ARMCX5Q6P1M9 558 aa16.15■□□□□ 0.18
MSH5-208ENST00000429846 SLC39A4Q6P5W5 647 aa16.15■□□□□ 0.18
MSH5-208ENST00000429846 C1orf228Q6PIY5 440 aa16.15■□□□□ 0.18
MSH5-208ENST00000429846 MFSD6LQ8IWD5 586 aa16.15■□□□□ 0.18
MSH5-208ENST00000429846 SUMF1Q8NBK3 374 aa16.15■□□□□ 0.18
MSH5-208ENST00000429846 ZBTB44Q8NCP5 570 aa16.15■□□□□ 0.18
MSH5-208ENST00000429846 SHKBP1Q8TBC3 707 aa16.15■□□□□ 0.18
MSH5-208ENST00000429846 LRRC15Q8TF66 581 aa16.15■□□□□ 0.18
MSH5-208ENST00000429846 ATRIPQ8WXE1 791 aa16.15■□□□□ 0.18
MSH5-208ENST00000429846 NELL1Q92832 810 aa16.15■□□□□ 0.18
MSH5-208ENST00000429846 PGLYRP2Q96PD5 576 aa16.15■□□□□ 0.18
MSH5-208ENST00000429846 CCSER1Q9C0I3 900 aa16.15■□□□□ 0.18
MSH5-208ENST00000429846 DNAJC25Q9H1X3 360 aa16.15■□□□□ 0.18
MSH5-208ENST00000429846 ZHX3Q9H4I2 956 aa16.15■□□□□ 0.18
MSH5-208ENST00000429846 ZNF334Q9HCZ1 680 aaPredicted RBP16.15■□□□□ 0.18
MSH5-208ENST00000429846 C2CD2Q9Y426 696 aa16.15■□□□□ 0.18
MSH5-208ENST00000429846 NRG2O14511 850 aaPredicted RBP16.14■□□□□ 0.17
MSH5-208ENST00000429846 ZNF263O14978 683 aa16.14■□□□□ 0.17
MSH5-208ENST00000429846 CYP11A1P05108 521 aa16.14■□□□□ 0.17
MSH5-208ENST00000429846 OR4Q2P0C623 313 aa16.14■□□□□ 0.17
MSH5-208ENST00000429846 GUCY2FP51841 1108 aa16.14■□□□□ 0.17
MSH5-208ENST00000429846 DUSP4Q13115 394 aa16.14■□□□□ 0.17
MSH5-208ENST00000429846 FZD5Q13467 585 aa16.14■□□□□ 0.17
MSH5-208ENST00000429846 PPP2R5DQ14738 602 aa16.14■□□□□ 0.17
MSH5-208ENST00000429846 SF3A1Q15459 793 aaKnown RBP16.14■□□□□ 0.17
MSH5-208ENST00000429846 C9orf57Q5W0N0 161 aa16.14■□□□□ 0.17
MSH5-208ENST00000429846 CENPPQ6IPU0 288 aa16.14■□□□□ 0.17
MSH5-208ENST00000429846 MAMSTRQ6ZN01 415 aa16.14■□□□□ 0.17
MSH5-208ENST00000429846 ITIH5Q86UX2 942 aa16.14■□□□□ 0.17
MSH5-208ENST00000429846 TMC8Q8IU68 726 aa16.14■□□□□ 0.17
MSH5-208ENST00000429846 KIAA2013Q8IYS2 634 aa16.14■□□□□ 0.17
MSH5-208ENST00000429846 KRI1Q8N9T8 703 aaKnown RBP16.14■□□□□ 0.17
MSH5-208ENST00000429846 HVCN1Q96D96 273 aa16.14■□□□□ 0.17
MSH5-208ENST00000429846 FAM212AQ96EL1 285 aa16.14■□□□□ 0.17
MSH5-208ENST00000429846 SENP8Q96LD8 212 aa16.14■□□□□ 0.17
MSH5-208ENST00000429846 ZSWIM3Q96MP5 696 aa16.14■□□□□ 0.17
MSH5-208ENST00000429846 LRRC3Q9BY71 257 aa16.14■□□□□ 0.17
MSH5-208ENST00000429846 CHRDQ9H2X0 955 aa16.14■□□□□ 0.17
MSH5-208ENST00000429846 DSEQ9UL01 958 aa16.14■□□□□ 0.17
MSH5-208ENST00000429846 STYXL1Q9Y6J8 313 aa16.14■□□□□ 0.17
MSH5-208ENST00000429846 PIAS3Q9Y6X2 628 aa16.14■□□□□ 0.17
MSH5-208ENST00000429846 SCN1AP35498 2009 aa16.14■□□□□ 0.17
MSH5-208ENST00000429846 A0A1W2PRU2 124 aa16.13■□□□□ 0.17
MSH5-208ENST00000429846 ANO9A1A5B4 782 aa16.13■□□□□ 0.17
MSH5-208ENST00000429846 PIRO00625 290 aa16.13■□□□□ 0.17
MSH5-208ENST00000429846 PPEF2O14830 753 aa16.13■□□□□ 0.17
MSH5-208ENST00000429846 LILRB5O75023 590 aa16.13■□□□□ 0.17
MSH5-208ENST00000429846 NFICP08651 508 aa16.13■□□□□ 0.17
MSH5-208ENST00000429846 GJA1P17302 382 aa16.13■□□□□ 0.17
MSH5-208ENST00000429846 DDIT3P35638 169 aa16.13■□□□□ 0.17
MSH5-208ENST00000429846 GRIN1Q05586 938 aa16.13■□□□□ 0.17
MSH5-208ENST00000429846 FCHO2Q0JRZ9 810 aa16.13■□□□□ 0.17
MSH5-208ENST00000429846 SMARCB1Q12824 385 aa16.13■□□□□ 0.17
MSH5-208ENST00000429846 ADALQ6DHV7 355 aa16.13■□□□□ 0.17
MSH5-208ENST00000429846 ZNF687Q8N1G0 1237 aa16.13■□□□□ 0.17
MSH5-208ENST00000429846 TMEM130Q8N3G9 435 aa16.13■□□□□ 0.17
MSH5-208ENST00000429846 GPR161Q8N6U8 529 aaKnown RBP16.13■□□□□ 0.17
MSH5-208ENST00000429846 FAM3CQ92520 227 aa16.13■□□□□ 0.17
MSH5-208ENST00000429846 PSMG2Q969U7 264 aa16.13■□□□□ 0.17
MSH5-208ENST00000429846 EPC1Q9H2F5 836 aa16.13■□□□□ 0.17
MSH5-208ENST00000429846 CRISPLD1Q9H336 500 aa16.13■□□□□ 0.17
MSH5-208ENST00000429846 STK17AQ9UEE5 414 aa16.13■□□□□ 0.17
MSH5-208ENST00000429846 NDRG2Q9UN36 371 aaKnown RBP16.13■□□□□ 0.17
MSH5-208ENST00000429846 HEPACAM2A8MVW5 462 aa16.12■□□□□ 0.17
MSH5-208ENST00000429846 ARNTLO00327 626 aa16.12■□□□□ 0.17
MSH5-208ENST00000429846 CHADO15335 359 aa16.12■□□□□ 0.17
MSH5-208ENST00000429846 PDCP20941 246 aa16.12■□□□□ 0.17
MSH5-208ENST00000429846 NMT1P30419 496 aaKnown RBP16.12■□□□□ 0.17
MSH5-208ENST00000429846 VIPR2P41587 438 aa16.12■□□□□ 0.17
MSH5-208ENST00000429846 TUFMP49411 452 aaKnown RBP16.12■□□□□ 0.17
MSH5-208ENST00000429846 TAF6P49848 677 aa16.12■□□□□ 0.17
MSH5-208ENST00000429846 NRLP54845 237 aa16.12■□□□□ 0.17
MSH5-208ENST00000429846 MTAPQ13126 283 aa16.12■□□□□ 0.17
MSH5-208ENST00000429846 NT5DC4Q86YG4 428 aa16.12■□□□□ 0.17
MSH5-208ENST00000429846 YAF2Q8IY57 180 aa16.12■□□□□ 0.17
MSH5-208ENST00000429846 ATAD1Q8NBU5 361 aa16.12■□□□□ 0.17
MSH5-208ENST00000429846 C2orf15Q8WU43 125 aaKnown RBP16.12■□□□□ 0.17
MSH5-208ENST00000429846 SECISBP2LQ93073 1101 aaKnown RBP16.12■□□□□ 0.17
MSH5-208ENST00000429846 OBP2AQ9NY56 170 aa16.12■□□□□ 0.17
MSH5-208ENST00000429846 NCDNQ9UBB6 729 aa16.12■□□□□ 0.17
MSH5-208ENST00000429846 SEL1LQ9UBV2 794 aa16.12■□□□□ 0.17
MSH5-208ENST00000429846 CCDC39Q9UFE4 941 aa16.12■□□□□ 0.17
MSH5-208ENST00000429846 AGO2Q9UKV8 859 aaKnown RBP16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms