RNA–Protein interactions for RNA: ENST00000429411.5

HPS4-205, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 3,492 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-205ENST00000429411 TARSP26639 723 aaKnown RBP8.52□□□□□ -1.05
HPS4-205ENST00000429411 MAGEA4P43358 317 aa8.52□□□□□ -1.05
HPS4-205ENST00000429411 NOVP48745 357 aa8.52□□□□□ -1.05
HPS4-205ENST00000429411 PRKCEQ02156 737 aa8.52□□□□□ -1.05
HPS4-205ENST00000429411 DRP2Q13474 957 aa8.52□□□□□ -1.05
HPS4-205ENST00000429411 ALCAMQ13740 583 aa8.52□□□□□ -1.05
HPS4-205ENST00000429411 CNGA2Q16280 664 aa8.52□□□□□ -1.05
HPS4-205ENST00000429411 C11orf63Q6NUN7 778 aa8.52□□□□□ -1.05
HPS4-205ENST00000429411 FOXR2Q6PJQ5 311 aa8.52□□□□□ -1.05
HPS4-205ENST00000429411 ZC3H18Q86VM9 953 aaKnown RBP8.52□□□□□ -1.05
HPS4-205ENST00000429411 RBBP8NLQ8NC74 664 aaPredicted RBP8.52□□□□□ -1.05
HPS4-205ENST00000429411 AGBL3Q8NEM8 1001 aa8.52□□□□□ -1.05
HPS4-205ENST00000429411 NLRP4Q96MN2 994 aa8.52□□□□□ -1.05
HPS4-205ENST00000429411 RPS6KC1Q96S38 1066 aa8.52□□□□□ -1.05
HPS4-205ENST00000429411 TMEM121Q9BTD3 319 aa8.52□□□□□ -1.05
HPS4-205ENST00000429411 INO80BQ9C086 356 aaPredicted RBP8.52□□□□□ -1.05
HPS4-205ENST00000429411 MRPL47Q9HD33 250 aaKnown RBP8.52□□□□□ -1.05
HPS4-205ENST00000429411 NAALADL1Q9UQQ1 740 aa8.52□□□□□ -1.05
HPS4-205ENST00000429411 NEU2Q9Y3R4 380 aa8.52□□□□□ -1.05
HPS4-205ENST00000429411 PCDHA3Q9Y5H8 950 aa8.52□□□□□ -1.05
HPS4-205ENST00000429411 CSADQ9Y600 493 aa8.52□□□□□ -1.05
HPS4-205ENST00000429411 BRCA2P51587 3418 aa8.52□□□□□ -1.05
HPS4-205ENST00000429411 ICAM1P05362 532 aa8.52□□□□□ -1.05
HPS4-205ENST00000429411 CFHP08603 1231 aa8.52□□□□□ -1.05
HPS4-205ENST00000429411 TMEM191BP0C7N4 346 aa8.52□□□□□ -1.05
HPS4-205ENST00000429411 MYBL1P10243 752 aa8.52□□□□□ -1.05
HPS4-205ENST00000429411 ITIH2P19823 946 aa8.52□□□□□ -1.05
HPS4-205ENST00000429411 FNTAP49354 379 aa8.52□□□□□ -1.05
HPS4-205ENST00000429411 APLP1P51693 650 aa8.52□□□□□ -1.05
HPS4-205ENST00000429411 NLRP11P59045 1033 aaKnown RBP8.52□□□□□ -1.05
HPS4-205ENST00000429411 MRPS9P82933 396 aaKnown RBP8.52□□□□□ -1.05
HPS4-205ENST00000429411 KRT76Q01546 638 aa8.52□□□□□ -1.05
HPS4-205ENST00000429411 RFX6Q8HWS3 928 aa8.52□□□□□ -1.05
HPS4-205ENST00000429411 CCDC33Q8N5R6 958 aa8.52□□□□□ -1.05
HPS4-205ENST00000429411 PPP1R14CQ8TAE6 165 aa8.52□□□□□ -1.05
HPS4-205ENST00000429411 PYROXD1Q8WU10 500 aa8.52□□□□□ -1.05
HPS4-205ENST00000429411 NSMCE1Q8WV22 266 aa8.52□□□□□ -1.05
HPS4-205ENST00000429411 TTC17Q96AE7 1141 aa8.52□□□□□ -1.05
HPS4-205ENST00000429411 MAK16Q9BXY0 300 aaKnown RBP8.52□□□□□ -1.05
HPS4-205ENST00000429411 SLCO1B3Q9NPD5 702 aa8.52□□□□□ -1.05
HPS4-205ENST00000429411 KCND2Q9NZV8 630 aa8.52□□□□□ -1.05
HPS4-205ENST00000429411 FBXO9Q9UK97 447 aaPredicted RBP8.52□□□□□ -1.05
HPS4-205ENST00000429411 COL5A3P25940 1745 aaPredicted RBP8.52□□□□□ -1.05
HPS4-205ENST00000429411 CSDE1O75534 798 aaKnown RBP8.51□□□□□ -1.05
HPS4-205ENST00000429411 STAM2O75886 525 aa8.51□□□□□ -1.05
HPS4-205ENST00000429411 TTC4O95801 387 aa8.51□□□□□ -1.05
HPS4-205ENST00000429411 GZMAP12544 262 aa8.51□□□□□ -1.05
HPS4-205ENST00000429411 ELF1P32519 619 aa8.51□□□□□ -1.05
HPS4-205ENST00000429411 GTF2H1P32780 548 aa8.51□□□□□ -1.05
HPS4-205ENST00000429411 PTGIRP43119 386 aa8.51□□□□□ -1.05
HPS4-205ENST00000429411 TAS2R40P59535 323 aa8.51□□□□□ -1.05
HPS4-205ENST00000429411 ACCSLQ4AC99 568 aa8.51□□□□□ -1.05
HPS4-205ENST00000429411 USP50Q70EL3 339 aaPredicted RBP8.51□□□□□ -1.05
HPS4-205ENST00000429411 TRMT10CQ7L0Y3 403 aaKnown RBP8.51□□□□□ -1.05
HPS4-205ENST00000429411 FAM71AQ8IYT1 594 aa8.51□□□□□ -1.05
HPS4-205ENST00000429411 BSNDQ8WZ55 320 aa8.51□□□□□ -1.05
HPS4-205ENST00000429411 ITFG2Q969R8 447 aa8.51□□□□□ -1.05
HPS4-205ENST00000429411 PGM2Q96G03 612 aa8.51□□□□□ -1.05
HPS4-205ENST00000429411 CAPNS2Q96L46 248 aa8.51□□□□□ -1.05
HPS4-205ENST00000429411 C12orf65Q9H3J6 166 aaKnown RBP8.51□□□□□ -1.05
HPS4-205ENST00000429411 TRABDQ9H4I3 376 aa8.51□□□□□ -1.05
HPS4-205ENST00000429411 ATP6V0A4Q9HBG4 840 aa8.51□□□□□ -1.05
HPS4-205ENST00000429411 NPHS2Q9NP85 383 aa8.51□□□□□ -1.05
HPS4-205ENST00000429411 DMAC2Q9NW81 257 aa8.51□□□□□ -1.05
HPS4-205ENST00000429411 NINJ2Q9NZG7 142 aa8.51□□□□□ -1.05
HPS4-205ENST00000429411 SCN7AQ01118 1682 aa8.51□□□□□ -1.05
HPS4-205ENST00000429411 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP8.51□□□□□ -1.05
HPS4-205ENST00000429411 CDH16O75309 829 aa8.51□□□□□ -1.05
HPS4-205ENST00000429411 GRAP2O75791 330 aa8.51□□□□□ -1.05
HPS4-205ENST00000429411 ATP6V1G2O95670 118 aa8.51□□□□□ -1.05
HPS4-205ENST00000429411 GGPS1O95749 300 aa8.51□□□□□ -1.05
HPS4-205ENST00000429411 PSAPP07602 524 aa8.51□□□□□ -1.05
HPS4-205ENST00000429411 PDHA1P08559 390 aa8.51□□□□□ -1.05
HPS4-205ENST00000429411 CCND2P30279 289 aa8.51□□□□□ -1.05
HPS4-205ENST00000429411 JAK3P52333 1124 aa8.51□□□□□ -1.05
HPS4-205ENST00000429411 GSCP56915 257 aaPredicted RBP8.51□□□□□ -1.05
HPS4-205ENST00000429411 BPIFB4P59827 614 aa8.51□□□□□ -1.05
HPS4-205ENST00000429411 RPL7AP62424 266 aaKnown RBP8.51□□□□□ -1.05
HPS4-205ENST00000429411 ELF3P78545 371 aaPredicted RBP8.51□□□□□ -1.05
HPS4-205ENST00000429411 FYB2Q5VWT5 728 aa8.51□□□□□ -1.05
HPS4-205ENST00000429411 RHPN2Q8IUC4 686 aa8.51□□□□□ -1.05
HPS4-205ENST00000429411 SCYL3Q8IZE3 742 aa8.51□□□□□ -1.05
HPS4-205ENST00000429411 MCOLN2Q8IZK6 566 aa8.51□□□□□ -1.05
HPS4-205ENST00000429411 CYP4X1Q8N118 509 aa8.51□□□□□ -1.05
HPS4-205ENST00000429411 LRRN4Q8WUT4 740 aa8.51□□□□□ -1.05
HPS4-205ENST00000429411 CFAP57Q96MR6 1250 aa8.51□□□□□ -1.05
HPS4-205ENST00000429411 FIZ1Q96SL8 496 aa8.51□□□□□ -1.05
HPS4-205ENST00000429411 PDCD2LQ9BRP1 358 aa8.51□□□□□ -1.05
HPS4-205ENST00000429411 FBXO40Q9UH90 709 aa8.51□□□□□ -1.05
HPS4-205ENST00000429411 HAO1Q9UJM8 370 aa8.51□□□□□ -1.05
HPS4-205ENST00000429411 DNPEPQ9ULA0 475 aa8.51□□□□□ -1.05
HPS4-205ENST00000429411 MAGED2Q9UNF1 606 aaPredicted RBP8.51□□□□□ -1.05
HPS4-205ENST00000429411 TELO2Q9Y4R8 837 aa8.51□□□□□ -1.05
HPS4-205ENST00000429411 PCDHB2Q9Y5E7 798 aa8.51□□□□□ -1.05
HPS4-205ENST00000429411 KIAA1551Q9HCM1 1747 aa8.51□□□□□ -1.05
HPS4-205ENST00000429411 PIK3CDO00329 1044 aa8.5□□□□□ -1.05
HPS4-205ENST00000429411 NOP56O00567 594 aaKnown RBP8.5□□□□□ -1.05
HPS4-205ENST00000429411 CCNE2O96020 404 aa8.5□□□□□ -1.05
HPS4-205ENST00000429411 PSMA2P25787 234 aa8.5□□□□□ -1.05
HPS4-205ENST00000429411 ADSSP30520 456 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms