RNA–Protein interactions for RNA: ENST00000428892.1

APOBEC3C-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3C, humanhuman

TSL 3

Gene APOBEC3C, Length 1,056 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3C-202ENST00000428892 BRD9Q9H8M2 597 aa11.81□□□□□ -0.52
APOBEC3C-202ENST00000428892 DNMT3BQ9UBC3 853 aaKnown RBP11.81□□□□□ -0.52
APOBEC3C-202ENST00000428892 GDAQ9Y2T3 454 aa11.81□□□□□ -0.52
APOBEC3C-202ENST00000428892 WDR87Q6ZQQ6 2873 aa11.81□□□□□ -0.52
APOBEC3C-202ENST00000428892 FAM237AA0A1B0GTK4 181 aa11.8□□□□□ -0.52
APOBEC3C-202ENST00000428892 H0YCG3 227 aa11.8□□□□□ -0.52
APOBEC3C-202ENST00000428892 MAN2B1O00754 1011 aa11.8□□□□□ -0.52
APOBEC3C-202ENST00000428892 MEFVO15553 781 aaPredicted RBP11.8□□□□□ -0.52
APOBEC3C-202ENST00000428892 LILRB5O75023 590 aa11.8□□□□□ -0.52
APOBEC3C-202ENST00000428892 TBCAO75347 108 aaKnown RBP11.8□□□□□ -0.52
APOBEC3C-202ENST00000428892 TOM1L1O75674 476 aa11.8□□□□□ -0.52
APOBEC3C-202ENST00000428892 B3GAT3O94766 335 aa11.8□□□□□ -0.52
APOBEC3C-202ENST00000428892 KRT18P05783 430 aaKnown RBP11.8□□□□□ -0.52
APOBEC3C-202ENST00000428892 RHOP08100 348 aa11.8□□□□□ -0.52
APOBEC3C-202ENST00000428892 MCF2P10911 925 aa11.8□□□□□ -0.52
APOBEC3C-202ENST00000428892 GRM5P41594 1212 aa11.8□□□□□ -0.52
APOBEC3C-202ENST00000428892 SPEM2Q0P670 501 aa11.8□□□□□ -0.52
APOBEC3C-202ENST00000428892 MTAPQ13126 283 aa11.8□□□□□ -0.52
APOBEC3C-202ENST00000428892 RAB33AQ14088 237 aa11.8□□□□□ -0.52
APOBEC3C-202ENST00000428892 GRM2Q14416 872 aa11.8□□□□□ -0.52
APOBEC3C-202ENST00000428892 LPAL2Q16609 132 aa11.8□□□□□ -0.52
APOBEC3C-202ENST00000428892 ST3GAL2Q16842 350 aa11.8□□□□□ -0.52
APOBEC3C-202ENST00000428892 XKR4Q5GH76 650 aa11.8□□□□□ -0.52
APOBEC3C-202ENST00000428892 ANKS3Q6ZW76 656 aa11.8□□□□□ -0.52
APOBEC3C-202ENST00000428892 PDZD4Q76G19 769 aaPredicted RBP11.8□□□□□ -0.52
APOBEC3C-202ENST00000428892 RTL10Q7L3V2 364 aa11.8□□□□□ -0.52
APOBEC3C-202ENST00000428892 DYMQ7RTS9 669 aa11.8□□□□□ -0.52
APOBEC3C-202ENST00000428892 APBB1IPQ7Z5R6 666 aaPredicted RBP11.8□□□□□ -0.52
APOBEC3C-202ENST00000428892 MAP4K3Q8IVH8 894 aa11.8□□□□□ -0.52
APOBEC3C-202ENST00000428892 ELMOD1Q8N336 334 aa11.8□□□□□ -0.52
APOBEC3C-202ENST00000428892 CEP120Q8N960 986 aa11.8□□□□□ -0.52
APOBEC3C-202ENST00000428892 CLDN23Q96B33 292 aa11.8□□□□□ -0.52
APOBEC3C-202ENST00000428892 ZBTB45Q96K62 511 aaPredicted RBP11.8□□□□□ -0.52
APOBEC3C-202ENST00000428892 PRMT8Q9NR22 394 aaPredicted RBP11.8□□□□□ -0.52
APOBEC3C-202ENST00000428892 OLFML3Q9NRN5 406 aa11.8□□□□□ -0.52
APOBEC3C-202ENST00000428892 GDE1Q9NZC3 331 aa11.8□□□□□ -0.52
APOBEC3C-202ENST00000428892 MTRRQ9UBK8 725 aa11.8□□□□□ -0.52
APOBEC3C-202ENST00000428892 SEL1LQ9UBV2 794 aa11.8□□□□□ -0.52
APOBEC3C-202ENST00000428892 TBX20Q9UMR3 447 aa11.8□□□□□ -0.52
APOBEC3C-202ENST00000428892 HPSEQ9Y251 543 aa11.8□□□□□ -0.52
APOBEC3C-202ENST00000428892 ATP6V1DQ9Y5K8 247 aa11.8□□□□□ -0.52
APOBEC3C-202ENST00000428892 ANK1P16157 1881 aa11.8□□□□□ -0.52
APOBEC3C-202ENST00000428892 KIF26AQ9ULI4 1882 aaPredicted RBP11.79□□□□□ -0.52
APOBEC3C-202ENST00000428892 K7ENM7 598 aa11.79□□□□□ -0.52
APOBEC3C-202ENST00000428892 ADAM12O43184 909 aa11.79□□□□□ -0.52
APOBEC3C-202ENST00000428892 FAM189A1O60320 539 aa11.79□□□□□ -0.52
APOBEC3C-202ENST00000428892 PTPN2P17706 415 aa11.79□□□□□ -0.52
APOBEC3C-202ENST00000428892 NMT1P30419 496 aaKnown RBP11.79□□□□□ -0.52
APOBEC3C-202ENST00000428892 CCR3P51677 355 aa11.79□□□□□ -0.52
APOBEC3C-202ENST00000428892 ARPP19P56211 112 aa11.79□□□□□ -0.52
APOBEC3C-202ENST00000428892 MCL1Q07820 350 aa11.79□□□□□ -0.52
APOBEC3C-202ENST00000428892 STRN3Q13033 797 aa11.79□□□□□ -0.52
APOBEC3C-202ENST00000428892 SKOR2Q2VWA4 1001 aaPredicted RBP11.79□□□□□ -0.52
APOBEC3C-202ENST00000428892 ZNF568Q3ZCX4 644 aa11.79□□□□□ -0.52
APOBEC3C-202ENST00000428892 GLRA4Q5JXX5 417 aa11.79□□□□□ -0.52
APOBEC3C-202ENST00000428892 ADALQ6DHV7 355 aa11.79□□□□□ -0.52
APOBEC3C-202ENST00000428892 LAIR1Q6GTX8 287 aa11.79□□□□□ -0.52
APOBEC3C-202ENST00000428892 SLC39A4Q6P5W5 647 aa11.79□□□□□ -0.52
APOBEC3C-202ENST00000428892 MPZL3Q6UWV2 235 aa11.79□□□□□ -0.52
APOBEC3C-202ENST00000428892 ALKAL1Q6UXT8 129 aa11.79□□□□□ -0.52
APOBEC3C-202ENST00000428892 CLEC17AQ6ZS10 378 aa11.79□□□□□ -0.52
APOBEC3C-202ENST00000428892 ZNF720Q7Z2F6 126 aa11.79□□□□□ -0.52
APOBEC3C-202ENST00000428892 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.79□□□□□ -0.52
APOBEC3C-202ENST00000428892 SFR1Q86XK3 245 aa11.79□□□□□ -0.52
APOBEC3C-202ENST00000428892 IQUBQ8NA54 791 aa11.79□□□□□ -0.52
APOBEC3C-202ENST00000428892 NETO1Q8TDF5 533 aa11.79□□□□□ -0.52
APOBEC3C-202ENST00000428892 IRF7Q92985 503 aa11.79□□□□□ -0.52
APOBEC3C-202ENST00000428892 ELSPBP1Q96BH3 223 aa11.79□□□□□ -0.52
APOBEC3C-202ENST00000428892 DHX58Q96C10 678 aa11.79□□□□□ -0.52
APOBEC3C-202ENST00000428892 SPATA32Q96LK8 384 aa11.79□□□□□ -0.52
APOBEC3C-202ENST00000428892 UROC1Q96N76 676 aa11.79□□□□□ -0.52
APOBEC3C-202ENST00000428892 CORO1BQ9BR76 489 aa11.79□□□□□ -0.52
APOBEC3C-202ENST00000428892 IER2Q9BTL4 223 aa11.79□□□□□ -0.52
APOBEC3C-202ENST00000428892 FGFBP2Q9BYJ0 223 aa11.79□□□□□ -0.52
APOBEC3C-202ENST00000428892 TRIM9Q9C026 710 aa11.79□□□□□ -0.52
APOBEC3C-202ENST00000428892 MAGEF1Q9HAY2 307 aa11.79□□□□□ -0.52
APOBEC3C-202ENST00000428892 ZFP14Q9HCL3 533 aa11.79□□□□□ -0.52
APOBEC3C-202ENST00000428892 COL4A2P08572 1712 aa11.79□□□□□ -0.52
APOBEC3C-202ENST00000428892 NCOR2Q9Y618 2525 aa11.79□□□□□ -0.52
APOBEC3C-202ENST00000428892 GREB1Q4ZG55 1949 aa11.78□□□□□ -0.52
APOBEC3C-202ENST00000428892 ZNF197O14709 1029 aa11.78□□□□□ -0.52
APOBEC3C-202ENST00000428892 POLR2DO15514 142 aaKnown RBP11.78□□□□□ -0.52
APOBEC3C-202ENST00000428892 CEBPBP17676 345 aa11.78□□□□□ -0.52
APOBEC3C-202ENST00000428892 GAP43P17677 238 aa11.78□□□□□ -0.52
APOBEC3C-202ENST00000428892 FGFR3P22607 806 aa11.78□□□□□ -0.52
APOBEC3C-202ENST00000428892 CMA1P23946 247 aa11.78□□□□□ -0.52
APOBEC3C-202ENST00000428892 TKTP29401 623 aaKnown RBP11.78□□□□□ -0.52
APOBEC3C-202ENST00000428892 ABCD1P33897 745 aa11.78□□□□□ -0.52
APOBEC3C-202ENST00000428892 CLCNKBP51801 687 aa11.78□□□□□ -0.52
APOBEC3C-202ENST00000428892 YARSP54577 528 aaKnown RBP11.78□□□□□ -0.52
APOBEC3C-202ENST00000428892 NOLC1Q14978 699 aaKnown RBP eCLIP11.78□□□□□ -0.52
APOBEC3C-202ENST00000428892 SLC5A9Q2M3M2 681 aa11.78□□□□□ -0.52
APOBEC3C-202ENST00000428892 ZC2HC1CQ53FD0 456 aaPredicted RBP11.78□□□□□ -0.52
APOBEC3C-202ENST00000428892 PPM1JQ5JR12 505 aa11.78□□□□□ -0.52
APOBEC3C-202ENST00000428892 CYP4A22Q5TCH4 519 aa11.78□□□□□ -0.52
APOBEC3C-202ENST00000428892 IQCEQ6IPM2 695 aa11.78□□□□□ -0.52
APOBEC3C-202ENST00000428892 FAM3CQ92520 227 aa11.78□□□□□ -0.52
APOBEC3C-202ENST00000428892 HVCN1Q96D96 273 aa11.78□□□□□ -0.52
APOBEC3C-202ENST00000428892 PPP1R10Q96QC0 940 aaKnown RBP11.78□□□□□ -0.52
APOBEC3C-202ENST00000428892 C7orf25Q9BPX7 421 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms