RNA–Protein interactions for RNA: ENST00000428878.6

HIPK2-203, Transcript of homeodomain interacting protein kinase 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HIPK2, Length 3,969 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK2-203ENST00000428878 GRID2IPA4D2P6 1211 aa11.69□□□□□ -0.54
HIPK2-203ENST00000428878 CREB3O43889 395 aa11.69□□□□□ -0.54
HIPK2-203ENST00000428878 TOMM70O94826 608 aa11.69□□□□□ -0.54
HIPK2-203ENST00000428878 KIF4AO95239 1232 aa11.69□□□□□ -0.54
HIPK2-203ENST00000428878 CCDC130P13994 396 aa11.69□□□□□ -0.54
HIPK2-203ENST00000428878 ATP1A2P50993 1020 aa11.69□□□□□ -0.54
HIPK2-203ENST00000428878 PRUNE1Q86TP1 453 aa11.69□□□□□ -0.54
HIPK2-203ENST00000428878 SCUBE3Q8IX30 993 aa11.69□□□□□ -0.54
HIPK2-203ENST00000428878 EFCAB13Q8IY85 973 aa11.69□□□□□ -0.54
HIPK2-203ENST00000428878 SIX6OS1Q8N1H7 587 aa11.69□□□□□ -0.54
HIPK2-203ENST00000428878 EPS8L1Q8TE68 723 aa11.69□□□□□ -0.54
HIPK2-203ENST00000428878 SOCS4Q8WXH5 440 aa11.69□□□□□ -0.54
HIPK2-203ENST00000428878 ZBED2Q9BTP6 218 aa11.69□□□□□ -0.54
HIPK2-203ENST00000428878 APOBEC3GQ9HC16 384 aaKnown RBP11.69□□□□□ -0.54
HIPK2-203ENST00000428878 PCDHB2Q9Y5E7 798 aa11.69□□□□□ -0.54
HIPK2-203ENST00000428878 H7C0C1 242 aa11.69□□□□□ -0.54
HIPK2-203ENST00000428878 ATP5OP48047 213 aa11.69□□□□□ -0.54
HIPK2-203ENST00000428878 SLC26A2P50443 739 aa11.69□□□□□ -0.54
HIPK2-203ENST00000428878 YWHAEP62258 255 aaKnown RBP11.69□□□□□ -0.54
HIPK2-203ENST00000428878 HGSNATQ68CP4 663 aa11.69□□□□□ -0.54
HIPK2-203ENST00000428878 BRSK2Q8IWQ3 736 aa11.69□□□□□ -0.54
HIPK2-203ENST00000428878 KCTD6Q8NC69 237 aa11.69□□□□□ -0.54
HIPK2-203ENST00000428878 CCNYQ8ND76 341 aa11.69□□□□□ -0.54
HIPK2-203ENST00000428878 SCLYQ96I15 445 aa11.69□□□□□ -0.54
HIPK2-203ENST00000428878 RNPC3Q96LT9 517 aaKnown RBP11.69□□□□□ -0.54
HIPK2-203ENST00000428878 MTG1Q9BT17 334 aaPredicted RBP11.69□□□□□ -0.54
HIPK2-203ENST00000428878 HAPLN2Q9GZV7 340 aa11.69□□□□□ -0.54
HIPK2-203ENST00000428878 ZMYND15Q9H091 742 aa11.69□□□□□ -0.54
HIPK2-203ENST00000428878 METTL5Q9NRN9 209 aaKnown RBP11.69□□□□□ -0.54
HIPK2-203ENST00000428878 PASKQ96RG2 1323 aa11.68□□□□□ -0.54
HIPK2-203ENST00000428878 SGK1O00141 431 aa11.68□□□□□ -0.54
HIPK2-203ENST00000428878 CLDN5O00501 218 aa11.68□□□□□ -0.54
HIPK2-203ENST00000428878 GRB14Q14449 540 aa11.68□□□□□ -0.54
HIPK2-203ENST00000428878 GOLGA7BQ2TAP0 167 aa11.68□□□□□ -0.54
HIPK2-203ENST00000428878 CFAP58Q5T655 872 aa11.68□□□□□ -0.54
HIPK2-203ENST00000428878 SDHAF4Q5VUM1 108 aa11.68□□□□□ -0.54
HIPK2-203ENST00000428878 CCDC26Q8TAB7 109 aa11.68□□□□□ -0.54
HIPK2-203ENST00000428878 GPR152Q8TDT2 470 aa11.68□□□□□ -0.54
HIPK2-203ENST00000428878 MICAL1Q8TDZ2 1067 aa11.68□□□□□ -0.54
HIPK2-203ENST00000428878 PNKPQ96T60 521 aa11.68□□□□□ -0.54
HIPK2-203ENST00000428878 TJP2Q9UDY2 1190 aa11.68□□□□□ -0.54
HIPK2-203ENST00000428878 DMGDHQ9UI17 866 aaKnown RBP11.68□□□□□ -0.54
HIPK2-203ENST00000428878 FNDC3AQ9Y2H6 1198 aaKnown RBP11.68□□□□□ -0.54
HIPK2-203ENST00000428878 DIS3Q9Y2L1 958 aaKnown RBP11.68□□□□□ -0.54
HIPK2-203ENST00000428878 HSF2BPO75031 334 aa11.68□□□□□ -0.54
HIPK2-203ENST00000428878 TADA3O75528 432 aa11.68□□□□□ -0.54
HIPK2-203ENST00000428878 KRT3P12035 628 aa11.68□□□□□ -0.54
HIPK2-203ENST00000428878 BMT2Q1RMZ1 405 aa11.68□□□□□ -0.54
HIPK2-203ENST00000428878 C1orf228Q6PIY5 440 aa11.68□□□□□ -0.54
HIPK2-203ENST00000428878 GPR161Q8N6U8 529 aaKnown RBP11.68□□□□□ -0.54
HIPK2-203ENST00000428878 SAE1Q9UBE0 346 aaPredicted RBP11.68□□□□□ -0.54
HIPK2-203ENST00000428878 HMGXB4Q9UGU5 601 aa11.68□□□□□ -0.54
HIPK2-203ENST00000428878 PSME4Q14997 1843 aa11.68□□□□□ -0.54
HIPK2-203ENST00000428878 TTI1O43156 1089 aa11.68□□□□□ -0.54
HIPK2-203ENST00000428878 ATP2C2O75185 946 aa11.68□□□□□ -0.54
HIPK2-203ENST00000428878 RTN2O75298 545 aa11.68□□□□□ -0.54
HIPK2-203ENST00000428878 GNL1P36915 607 aaPredicted RBP11.68□□□□□ -0.54
HIPK2-203ENST00000428878 APPL2Q8NEU8 664 aa11.68□□□□□ -0.54
HIPK2-203ENST00000428878 TPCN2Q8NHX9 752 aa11.68□□□□□ -0.54
HIPK2-203ENST00000428878 CXCL16Q9H2A7 254 aa11.68□□□□□ -0.54
HIPK2-203ENST00000428878 CREBZFQ9NS37 354 aa11.68□□□□□ -0.54
HIPK2-203ENST00000428878 ABI2Q9NYB9 513 aaPredicted RBP11.68□□□□□ -0.54
HIPK2-203ENST00000428878 DOCK3Q8IZD9 2030 aa11.68□□□□□ -0.54
HIPK2-203ENST00000428878 CCDC78A2IDD5 438 aa11.67□□□□□ -0.54
HIPK2-203ENST00000428878 MSCO60682 206 aa11.67□□□□□ -0.54
HIPK2-203ENST00000428878 TBXAS1P24557 533 aaPredicted RBP11.67□□□□□ -0.54
HIPK2-203ENST00000428878 PSMD6Q15008 389 aa11.67□□□□□ -0.54
HIPK2-203ENST00000428878 SNX17Q15036 470 aa11.67□□□□□ -0.54
HIPK2-203ENST00000428878 SURF1Q15526 300 aa11.67□□□□□ -0.54
HIPK2-203ENST00000428878 KDELC2Q7Z4H8 507 aa11.67□□□□□ -0.54
HIPK2-203ENST00000428878 CTU1Q7Z7A3 348 aaKnown RBP11.67□□□□□ -0.54
HIPK2-203ENST00000428878 HOOK3Q86VS8 718 aa11.67□□□□□ -0.54
HIPK2-203ENST00000428878 C18orf8Q96DM3 657 aa11.67□□□□□ -0.54
HIPK2-203ENST00000428878 NRCAMQ92823 1304 aa11.67□□□□□ -0.54
HIPK2-203ENST00000428878 GOLGA8CPA6NN73 597 aa11.67□□□□□ -0.54
HIPK2-203ENST00000428878 XPOTO43592 962 aaKnown RBP11.67□□□□□ -0.54
HIPK2-203ENST00000428878 TUBB4AP04350 444 aa11.67□□□□□ -0.54
HIPK2-203ENST00000428878 INHAP05111 366 aa11.67□□□□□ -0.54
HIPK2-203ENST00000428878 PDGFRAP16234 1089 aa11.67□□□□□ -0.54
HIPK2-203ENST00000428878 ACO1P21399 889 aaKnown RBP11.67□□□□□ -0.54
HIPK2-203ENST00000428878 BRCC3P46736 316 aa11.67□□□□□ -0.54
HIPK2-203ENST00000428878 INHBEP58166 350 aa11.67□□□□□ -0.54
HIPK2-203ENST00000428878 RPL7AP62424 266 aaKnown RBP11.67□□□□□ -0.54
HIPK2-203ENST00000428878 ZACNQ401N2 412 aa11.67□□□□□ -0.54
HIPK2-203ENST00000428878 CC2D1AQ6P1N0 951 aaPredicted RBP11.67□□□□□ -0.54
HIPK2-203ENST00000428878 CASC4Q6P4E1 433 aa11.67□□□□□ -0.54
HIPK2-203ENST00000428878 TMEM40Q8WWA1 233 aa11.67□□□□□ -0.54
HIPK2-203ENST00000428878 B3GALT6Q96L58 329 aa11.67□□□□□ -0.54
HIPK2-203ENST00000428878 FGD4Q96M96 766 aa11.67□□□□□ -0.54
HIPK2-203ENST00000428878 SELENOSQ9BQE4 189 aa11.67□□□□□ -0.54
HIPK2-203ENST00000428878 C16orf70Q9BSU1 422 aa11.67□□□□□ -0.54
HIPK2-203ENST00000428878 TTYH3Q9C0H2 523 aa11.67□□□□□ -0.54
HIPK2-203ENST00000428878 GTF3C4Q9UKN8 822 aa11.67□□□□□ -0.54
HIPK2-203ENST00000428878 FANCGO15287 622 aa11.67□□□□□ -0.54
HIPK2-203ENST00000428878 ZRANB2O95218 330 aaKnown RBP eCLIP11.67□□□□□ -0.542e-12■■■■■ 79.3
HIPK2-203ENST00000428878 CPB1P15086 417 aa11.67□□□□□ -0.54
HIPK2-203ENST00000428878 VEGFBP49765 207 aa11.67□□□□□ -0.54
HIPK2-203ENST00000428878 CDR2Q01850 454 aa11.67□□□□□ -0.54
HIPK2-203ENST00000428878 MBTD1Q05BQ5 628 aa11.67□□□□□ -0.54
HIPK2-203ENST00000428878 SLC27A1Q6PCB7 646 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms