RNA–Protein interactions for RNA: ENST00000428174.1

CCHCR1-205, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 470 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-205ENST00000428174 WDR44Q5JSH3 913 aa13.81□□□□□ -0.2
CCHCR1-205ENST00000428174 RTP2Q5QGT7 225 aa13.81□□□□□ -0.2
CCHCR1-205ENST00000428174 KIAA0319Q5VV43 1072 aa13.81□□□□□ -0.2
CCHCR1-205ENST00000428174 PLPP4Q5VZY2 271 aa13.81□□□□□ -0.2
CCHCR1-205ENST00000428174 SPOPLQ6IQ16 392 aa13.81□□□□□ -0.2
CCHCR1-205ENST00000428174 PDXDC1Q6P996 788 aa13.81□□□□□ -0.2
CCHCR1-205ENST00000428174 METTL23Q86XA0 190 aa13.81□□□□□ -0.2
CCHCR1-205ENST00000428174 GPR65Q8IYL9 337 aa13.81□□□□□ -0.2
CCHCR1-205ENST00000428174 RNF214Q8ND24 703 aa13.81□□□□□ -0.2
CCHCR1-205ENST00000428174 AUTS2Q8WXX7 1259 aa13.81□□□□□ -0.2
CCHCR1-205ENST00000428174 PIK3R5Q8WYR1 880 aa13.81□□□□□ -0.2
CCHCR1-205ENST00000428174 GAS2L1Q99501 681 aaPredicted RBP13.81□□□□□ -0.2
CCHCR1-205ENST00000428174 MRPL17Q9NRX2 175 aaKnown RBP13.81□□□□□ -0.2
CCHCR1-205ENST00000428174 LMCD1Q9NZU5 365 aa13.81□□□□□ -0.2
CCHCR1-205ENST00000428174 NXF1Q9UBU9 619 aaKnown RBP13.81□□□□□ -0.2
CCHCR1-205ENST00000428174 DSEQ9UL01 958 aa13.81□□□□□ -0.2
CCHCR1-205ENST00000428174 TIMM13Q9Y5L4 95 aaPredicted RBP13.81□□□□□ -0.2
CCHCR1-205ENST00000428174 H7C4K7 107 aa13.8□□□□□ -0.2
CCHCR1-205ENST00000428174 LRRN2O75325 713 aa13.8□□□□□ -0.2
CCHCR1-205ENST00000428174 CYP11A1P05108 521 aa13.8□□□□□ -0.2
CCHCR1-205ENST00000428174 IGFBP4P22692 258 aa13.8□□□□□ -0.2
CCHCR1-205ENST00000428174 NOP14P78316 857 aaKnown RBP13.8□□□□□ -0.2
CCHCR1-205ENST00000428174 YWHAHQ04917 246 aaPredicted RBP13.8□□□□□ -0.2
CCHCR1-205ENST00000428174 ADGRE1Q14246 886 aa13.8□□□□□ -0.2
CCHCR1-205ENST00000428174 PTPN14Q15678 1187 aa13.8□□□□□ -0.2
CCHCR1-205ENST00000428174 MIIPQ5JXC2 388 aa13.8□□□□□ -0.2
CCHCR1-205ENST00000428174 VARS2Q5ST30 1063 aaKnown RBP13.8□□□□□ -0.2
CCHCR1-205ENST00000428174 WSCD1Q658N2 575 aa13.8□□□□□ -0.2
CCHCR1-205ENST00000428174 PRSS55Q6UWB4 352 aaPredicted RBP13.8□□□□□ -0.2
CCHCR1-205ENST00000428174 GBP6Q6ZN66 633 aa13.8□□□□□ -0.2
CCHCR1-205ENST00000428174 ANKS3Q6ZW76 656 aa13.8□□□□□ -0.2
CCHCR1-205ENST00000428174 DPH6Q7L8W6 267 aa13.8□□□□□ -0.2
CCHCR1-205ENST00000428174 TOP6BLQ8N6T0 577 aa13.8□□□□□ -0.2
CCHCR1-205ENST00000428174 MRPL43Q8N983 215 aaKnown RBP13.8□□□□□ -0.2
CCHCR1-205ENST00000428174 EHBP1Q8NDI1 1231 aa13.8□□□□□ -0.2
CCHCR1-205ENST00000428174 ELMO3Q96BJ8 720 aa13.8□□□□□ -0.2
CCHCR1-205ENST00000428174 MMS19Q96T76 1030 aa13.8□□□□□ -0.2
CCHCR1-205ENST00000428174 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.8□□□□□ -0.2
CCHCR1-205ENST00000428174 L1RE1Q9UN81 338 aa13.8□□□□□ -0.2
CCHCR1-205ENST00000428174 POLIQ9UNA4 740 aa13.8□□□□□ -0.2
CCHCR1-205ENST00000428174 MYO7AQ13402 2215 aa13.8□□□□□ -0.2
CCHCR1-205ENST00000428174 LAMA2P24043 3122 aaKnown RBP13.79□□□□□ -0.2
CCHCR1-205ENST00000428174 PLXNA4Q9HCM2 1894 aa13.79□□□□□ -0.2
CCHCR1-205ENST00000428174 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.79□□□□□ -0.2
CCHCR1-205ENST00000428174 GTPBP10A4D1E9 387 aaKnown RBP13.79□□□□□ -0.2
CCHCR1-205ENST00000428174 LRRC10BA6NIK2 292 aa13.79□□□□□ -0.2
CCHCR1-205ENST00000428174 LILRB3O75022 631 aa13.79□□□□□ -0.2
CCHCR1-205ENST00000428174 LRMPQ12912 555 aa13.79□□□□□ -0.2
CCHCR1-205ENST00000428174 MRPL58Q14197 206 aaKnown RBP13.79□□□□□ -0.2
CCHCR1-205ENST00000428174 PSMD5Q16401 504 aa13.79□□□□□ -0.2
CCHCR1-205ENST00000428174 EXOC3L4Q17RC7 722 aa13.79□□□□□ -0.2
CCHCR1-205ENST00000428174 FKBP15Q5T1M5 1219 aa13.79□□□□□ -0.2
CCHCR1-205ENST00000428174 OVOS1Q6IE37 1185 aa13.79□□□□□ -0.2
CCHCR1-205ENST00000428174 ZNF280DQ6N043 979 aa13.79□□□□□ -0.2
CCHCR1-205ENST00000428174 TMEM86AQ8N2M4 240 aa13.79□□□□□ -0.2
CCHCR1-205ENST00000428174 PDCL2Q8N4E4 241 aa13.79□□□□□ -0.2
CCHCR1-205ENST00000428174 LNX1Q8TBB1 728 aaPredicted RBP13.79□□□□□ -0.2
CCHCR1-205ENST00000428174 MYLIPQ8WY64 445 aa13.79□□□□□ -0.2
CCHCR1-205ENST00000428174 NT5C1BQ96P26 610 aa13.79□□□□□ -0.2
CCHCR1-205ENST00000428174 CDX2Q99626 313 aaPredicted RBP13.79□□□□□ -0.2
CCHCR1-205ENST00000428174 CRACR2AQ9BSW2 395 aa13.79□□□□□ -0.2
CCHCR1-205ENST00000428174 NIF3L1Q9GZT8 377 aa13.79□□□□□ -0.2
CCHCR1-205ENST00000428174 INTS2Q9H0H0 1204 aaKnown RBP13.79□□□□□ -0.2
CCHCR1-205ENST00000428174 RXFP1Q9HBX9 757 aa13.79□□□□□ -0.2
CCHCR1-205ENST00000428174 APOBEC3GQ9HC16 384 aaKnown RBP13.79□□□□□ -0.2
CCHCR1-205ENST00000428174 MTMR10Q9NXD2 777 aa13.79□□□□□ -0.2
CCHCR1-205ENST00000428174 GCNT4Q9P109 453 aa13.79□□□□□ -0.2
CCHCR1-205ENST00000428174 PCDHGC5Q9Y5F6 944 aa13.79□□□□□ -0.2
CCHCR1-205ENST00000428174 IRAK3Q9Y616 596 aa13.79□□□□□ -0.2
CCHCR1-205ENST00000428174 C2orf71A6NGG8 1288 aa13.78□□□□□ -0.2
CCHCR1-205ENST00000428174 LGALS16A8MUM7 142 aa13.78□□□□□ -0.2
CCHCR1-205ENST00000428174 HIDE1A8MVS5 230 aa13.78□□□□□ -0.2
CCHCR1-205ENST00000428174 OAZ2O95190 189 aa13.78□□□□□ -0.2
CCHCR1-205ENST00000428174 SERPINC1P01008 464 aa13.78□□□□□ -0.2
CCHCR1-205ENST00000428174 FAM163BP0C2L3 166 aa13.78□□□□□ -0.2
CCHCR1-205ENST00000428174 POU3F3P20264 500 aaPredicted RBP13.78□□□□□ -0.2
CCHCR1-205ENST00000428174 CREMQ03060 361 aa13.78□□□□□ -0.2
CCHCR1-205ENST00000428174 SOWAHAQ2M3V2 549 aa13.78□□□□□ -0.2
CCHCR1-205ENST00000428174 FILIP1LQ4L180 1135 aa13.78□□□□□ -0.2
CCHCR1-205ENST00000428174 CTXN3Q4LDR2 81 aa13.78□□□□□ -0.2
CCHCR1-205ENST00000428174 SCARA5Q6ZMJ2 495 aa13.78□□□□□ -0.2
CCHCR1-205ENST00000428174 APTXQ7Z2E3 356 aaKnown RBP13.78□□□□□ -0.2
CCHCR1-205ENST00000428174 LIMS2Q7Z4I7 341 aa13.78□□□□□ -0.2
CCHCR1-205ENST00000428174 ADGRF2Q8IZF7 708 aa13.78□□□□□ -0.2
CCHCR1-205ENST00000428174 THEM5Q8N1Q8 247 aa13.78□□□□□ -0.2
CCHCR1-205ENST00000428174 LMO3Q8TAP4 145 aa13.78□□□□□ -0.2
CCHCR1-205ENST00000428174 SPATA18Q8TC71 538 aa13.78□□□□□ -0.2
CCHCR1-205ENST00000428174 TATDN2Q93075 761 aa13.78□□□□□ -0.2
CCHCR1-205ENST00000428174 PPP2R3CQ969Q6 453 aa13.78□□□□□ -0.2
CCHCR1-205ENST00000428174 FAXDC2Q96IV6 333 aa13.78□□□□□ -0.2
CCHCR1-205ENST00000428174 KLHL5Q96PQ7 755 aa13.78□□□□□ -0.2
CCHCR1-205ENST00000428174 MRPL45Q9BRJ2 306 aaKnown RBP13.78□□□□□ -0.2
CCHCR1-205ENST00000428174 EMILIN2Q9BXX0 1053 aa13.78□□□□□ -0.2
CCHCR1-205ENST00000428174 NSUN3Q9H649 340 aaKnown RBP13.78□□□□□ -0.2
CCHCR1-205ENST00000428174 SMYD3Q9H7B4 428 aa13.78□□□□□ -0.2
CCHCR1-205ENST00000428174 CYP3A43Q9HB55 503 aa13.78□□□□□ -0.2
CCHCR1-205ENST00000428174 FNIP2Q9P278 1114 aa13.78□□□□□ -0.2
CCHCR1-205ENST00000428174 MTRRQ9UBK8 725 aa13.78□□□□□ -0.2
CCHCR1-205ENST00000428174 BACE2Q9Y5Z0 518 aa13.78□□□□□ -0.2
CCHCR1-205ENST00000428174 MTCH2Q9Y6C9 303 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms