RNA–Protein interactions for RNA: ENST00000428136.1

LRCH3-204, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 5

Gene LRCH3, Length 3,205 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-204ENST00000428136 NAMPTP43490 491 aa8.33□□□□□ -1.08
LRCH3-204ENST00000428136 LIG4P49917 911 aa8.33□□□□□ -1.08
LRCH3-204ENST00000428136 WDR4P57081 412 aaKnown RBP8.33□□□□□ -1.08
LRCH3-204ENST00000428136 IRX3P78415 501 aaPredicted RBP8.33□□□□□ -1.08
LRCH3-204ENST00000428136 MORF4L2Q15014 288 aa8.33□□□□□ -1.08
LRCH3-204ENST00000428136 OASLQ15646 514 aaKnown RBP8.33□□□□□ -1.08
LRCH3-204ENST00000428136 MIS18BP1Q6P0N0 1132 aa8.33□□□□□ -1.08
LRCH3-204ENST00000428136 TTLL6Q8N841 843 aa8.33□□□□□ -1.08
LRCH3-204ENST00000428136 NSUN6Q8TEA1 469 aaKnown RBP8.33□□□□□ -1.08
LRCH3-204ENST00000428136 NKD2Q969F2 451 aaPredicted RBP8.33□□□□□ -1.08
LRCH3-204ENST00000428136 FNBP1Q96RU3 617 aa8.33□□□□□ -1.08
LRCH3-204ENST00000428136 RBM15Q96T37 977 aaKnown RBP eCLIP8.33□□□□□ -1.08
LRCH3-204ENST00000428136 C11orf70Q9BRQ4 267 aa8.33□□□□□ -1.08
LRCH3-204ENST00000428136 HEMGNQ9BXL5 484 aa8.33□□□□□ -1.08
LRCH3-204ENST00000428136 CXorf56Q9H5V9 222 aa8.33□□□□□ -1.08
LRCH3-204ENST00000428136 TMEM134Q9H6X4 195 aa8.33□□□□□ -1.08
LRCH3-204ENST00000428136 SSU72Q9NP77 194 aaKnown RBP8.33□□□□□ -1.08
LRCH3-204ENST00000428136 KCNK9Q9NPC2 374 aa8.33□□□□□ -1.08
LRCH3-204ENST00000428136 RNF146Q9NTX7 359 aa8.33□□□□□ -1.08
LRCH3-204ENST00000428136 SLC9A2Q9UBY0 812 aa8.33□□□□□ -1.08
LRCH3-204ENST00000428136 COL11A1P12107 1806 aaPredicted RBP8.33□□□□□ -1.08
LRCH3-204ENST00000428136 ATP4AP20648 1035 aa8.33□□□□□ -1.08
LRCH3-204ENST00000428136 AP3M2P53677 418 aa8.33□□□□□ -1.08
LRCH3-204ENST00000428136 ZNF280AP59817 542 aaPredicted RBP8.33□□□□□ -1.08
LRCH3-204ENST00000428136 ACTR2P61160 394 aa8.33□□□□□ -1.08
LRCH3-204ENST00000428136 ZNF252P-AS1Q0IIN9 211 aa8.33□□□□□ -1.08
LRCH3-204ENST00000428136 CBLBQ13191 982 aa8.33□□□□□ -1.08
LRCH3-204ENST00000428136 DGKZQ13574 1117 aa8.33□□□□□ -1.08
LRCH3-204ENST00000428136 LLGL1Q15334 1064 aa8.33□□□□□ -1.08
LRCH3-204ENST00000428136 P3H1Q32P28 736 aa8.33□□□□□ -1.08
LRCH3-204ENST00000428136 SPOPLQ6IQ16 392 aa8.33□□□□□ -1.08
LRCH3-204ENST00000428136 TBC1D1Q86TI0 1168 aaPredicted RBP8.33□□□□□ -1.08
LRCH3-204ENST00000428136 RBBP8NLQ8NC74 664 aaPredicted RBP8.33□□□□□ -1.08
LRCH3-204ENST00000428136 MGARPQ8TDB4 240 aa8.33□□□□□ -1.08
LRCH3-204ENST00000428136 NIFKQ9BYG3 293 aaKnown RBP8.33□□□□□ -1.08
LRCH3-204ENST00000428136 MYOZ2Q9NPC6 264 aa8.33□□□□□ -1.08
LRCH3-204ENST00000428136 NKIRAS1Q9NYS0 192 aa8.33□□□□□ -1.08
LRCH3-204ENST00000428136 SENP1Q9P0U3 644 aa8.33□□□□□ -1.08
LRCH3-204ENST00000428136 EFR3BQ9Y2G0 817 aa8.33□□□□□ -1.08
LRCH3-204ENST00000428136 TELO2Q9Y4R8 837 aa8.33□□□□□ -1.08
LRCH3-204ENST00000428136 NUB1Q9Y5A7 615 aa8.33□□□□□ -1.08
LRCH3-204ENST00000428136 PCDHB4Q9Y5E5 795 aa8.33□□□□□ -1.08
LRCH3-204ENST00000428136 CD2APQ9Y5K6 639 aa8.33□□□□□ -1.08
LRCH3-204ENST00000428136 IGKV6D-21A0A0A0MT36 114 aa8.32□□□□□ -1.08
LRCH3-204ENST00000428136 FOXO6A8MYZ6 492 aa8.32□□□□□ -1.08
LRCH3-204ENST00000428136 WFS1O76024 890 aa8.32□□□□□ -1.08
LRCH3-204ENST00000428136 TJP3O95049 919 aa8.32□□□□□ -1.08
LRCH3-204ENST00000428136 ITGAVP06756 1048 aa8.32□□□□□ -1.08
LRCH3-204ENST00000428136 SUPT20HL2P0C7V6 817 aa8.32□□□□□ -1.08
LRCH3-204ENST00000428136 TNNI1P19237 187 aa8.32□□□□□ -1.08
LRCH3-204ENST00000428136 KCNA3P22001 575 aa8.32□□□□□ -1.08
LRCH3-204ENST00000428136 STX2P32856 288 aa8.32□□□□□ -1.08
LRCH3-204ENST00000428136 ICAM3P32942 547 aa8.32□□□□□ -1.08
LRCH3-204ENST00000428136 KCNJ2P63252 427 aa8.32□□□□□ -1.08
LRCH3-204ENST00000428136 IL9RQ01113 521 aa8.32□□□□□ -1.08
LRCH3-204ENST00000428136 TAP1Q03518 808 aa8.32□□□□□ -1.08
LRCH3-204ENST00000428136 MKRN4PQ13434 485 aaPredicted RBP8.32□□□□□ -1.08
LRCH3-204ENST00000428136 EMC2Q15006 297 aa8.32□□□□□ -1.08
LRCH3-204ENST00000428136 SUPT20HL1Q3ZLR7 823 aa8.32□□□□□ -1.08
LRCH3-204ENST00000428136 DAB2IPQ5VWQ8 1189 aa8.32□□□□□ -1.08
LRCH3-204ENST00000428136 ECHDC2Q86YB7 292 aa8.32□□□□□ -1.08
LRCH3-204ENST00000428136 ANKRD42Q8N9B4 389 aa8.32□□□□□ -1.08
LRCH3-204ENST00000428136 BICD1Q96G01 975 aa8.32□□□□□ -1.08
LRCH3-204ENST00000428136 WNK4Q96J92 1243 aa8.32□□□□□ -1.08
LRCH3-204ENST00000428136 C12orf42Q96LP6 360 aa8.32□□□□□ -1.08
LRCH3-204ENST00000428136 RMDN2Q96LZ7 410 aa8.32□□□□□ -1.08
LRCH3-204ENST00000428136 ZNF277Q9NRM2 450 aaPredicted RBP8.32□□□□□ -1.08
LRCH3-204ENST00000428136 SMG5Q9UPR3 1016 aaKnown RBP8.32□□□□□ -1.08
LRCH3-204ENST00000428136 PHIPQ8WWQ0 1821 aa8.32□□□□□ -1.08
LRCH3-204ENST00000428136 LCTP09848 1927 aa8.32□□□□□ -1.08
LRCH3-204ENST00000428136 DOCK5Q9H7D0 1870 aa8.32□□□□□ -1.08
LRCH3-204ENST00000428136 FAM189A1O60320 539 aa8.32□□□□□ -1.08
LRCH3-204ENST00000428136 CALB1P05937 261 aa8.32□□□□□ -1.08
LRCH3-204ENST00000428136 GLRA2P23416 452 aa8.32□□□□□ -1.08
LRCH3-204ENST00000428136 CETN2P41208 172 aa8.32□□□□□ -1.08
LRCH3-204ENST00000428136 ALDH5A1P51649 535 aaPredicted RBP8.32□□□□□ -1.08
LRCH3-204ENST00000428136 CCNG1P51959 295 aa8.32□□□□□ -1.08
LRCH3-204ENST00000428136 YARSP54577 528 aaKnown RBP8.32□□□□□ -1.08
LRCH3-204ENST00000428136 MTMR2Q13614 643 aa8.32□□□□□ -1.08
LRCH3-204ENST00000428136 MOGSQ13724 837 aa8.32□□□□□ -1.08
LRCH3-204ENST00000428136 TAZQ16635 292 aa8.32□□□□□ -1.08
LRCH3-204ENST00000428136 C2CD6Q53TS8 623 aa8.32□□□□□ -1.08
LRCH3-204ENST00000428136 RNASEH2BQ5TBB1 312 aaKnown RBP8.32□□□□□ -1.08
LRCH3-204ENST00000428136 TMEM270Q6UE05 265 aa8.32□□□□□ -1.08
LRCH3-204ENST00000428136 ZNF606Q8WXB4 792 aa8.32□□□□□ -1.08
LRCH3-204ENST00000428136 ATG4CQ96DT6 458 aa8.32□□□□□ -1.08
LRCH3-204ENST00000428136 FAM84AQ96KN4 292 aa8.32□□□□□ -1.08
LRCH3-204ENST00000428136 C9orf72Q96LT7 481 aa8.32□□□□□ -1.08
LRCH3-204ENST00000428136 FRMD8P1Q9BZ68 369 aaPredicted RBP8.32□□□□□ -1.08
LRCH3-204ENST00000428136 ZNF518BQ9C0D4 1074 aa8.32□□□□□ -1.08
LRCH3-204ENST00000428136 RBAKQ9NYW8 714 aaPredicted RBP8.32□□□□□ -1.08
LRCH3-204ENST00000428136 SEPT9Q9UHD8 586 aaPredicted RBP8.32□□□□□ -1.08
LRCH3-204ENST00000428136 SLC24A2Q9UI40 661 aa8.32□□□□□ -1.08
LRCH3-204ENST00000428136 ZNF112Q9UJU3 913 aa8.32□□□□□ -1.08
LRCH3-204ENST00000428136 ZNF214Q9UL59 606 aaPredicted RBP8.32□□□□□ -1.08
LRCH3-204ENST00000428136 DNPEPQ9ULA0 475 aa8.32□□□□□ -1.08
LRCH3-204ENST00000428136 SHOC2Q9UQ13 582 aa8.32□□□□□ -1.08
LRCH3-204ENST00000428136 SSC5DA1L4H1 1573 aa8.32□□□□□ -1.08
LRCH3-204ENST00000428136 hCG_1818297A0A087WSY0 165 aa8.31□□□□□ -1.08
LRCH3-204ENST00000428136 C3orf70A6NLC5 250 aaPredicted RBP8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms