RNA–Protein interactions for RNA: ENST00000426840.1

LINC01049-201, Transcript of long intergenic non-protein coding RNA 1049, humanhuman

TSL 1 (best) BASIC

Gene LINC01049, Length 742 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01049-201ENST00000426840 MLKLQ8NB16 471 aa8.03□□□□□ -1.12
LINC01049-201ENST00000426840 PLPP7Q8NBV4 271 aa8.03□□□□□ -1.12
LINC01049-201ENST00000426840 ADAMTS19Q8TE59 1207 aa8.03□□□□□ -1.12
LINC01049-201ENST00000426840 BORCS6Q96GS4 357 aa8.03□□□□□ -1.12
LINC01049-201ENST00000426840 IGSF21Q96ID5 467 aa8.03□□□□□ -1.12
LINC01049-201ENST00000426840 GUCD1Q96NT3 240 aa8.03□□□□□ -1.12
LINC01049-201ENST00000426840 COLEC11Q9BWP8 271 aa8.03□□□□□ -1.12
LINC01049-201ENST00000426840 ALG2Q9H553 416 aa8.03□□□□□ -1.12
LINC01049-201ENST00000426840 GOLGA2P5Q9HBQ8 144 aa8.03□□□□□ -1.12
LINC01049-201ENST00000426840 ALG13Q9NP73 1137 aaKnown RBP8.03□□□□□ -1.12
LINC01049-201ENST00000426840 MARCH5Q9NX47 278 aa8.03□□□□□ -1.12
LINC01049-201ENST00000426840 RBAKQ9NYW8 714 aaPredicted RBP8.03□□□□□ -1.12
LINC01049-201ENST00000426840 UBQLN1Q9UMX0 589 aaKnown RBP8.03□□□□□ -1.12
LINC01049-201ENST00000426840 DERAQ9Y315 318 aa8.03□□□□□ -1.12
LINC01049-201ENST00000426840 MYO7AQ13402 2215 aa8.03□□□□□ -1.12
LINC01049-201ENST00000426840 PDCD11Q14690 1871 aaKnown RBP8.02□□□□□ -1.12
LINC01049-201ENST00000426840 RALGAPA2Q2PPJ7 1873 aa8.02□□□□□ -1.12
LINC01049-201ENST00000426840 LAMA3Q16787 3333 aa8.02□□□□□ -1.13
LINC01049-201ENST00000426840 ANO9A1A5B4 782 aa8.02□□□□□ -1.13
LINC01049-201ENST00000426840 CARNS1A5YM72 827 aa8.02□□□□□ -1.13
LINC01049-201ENST00000426840 CASTOR2A6NHX0 329 aa8.02□□□□□ -1.13
LINC01049-201ENST00000426840 TERTO14746 1132 aaKnown RBP8.02□□□□□ -1.13
LINC01049-201ENST00000426840 PSMA7O14818 248 aa8.02□□□□□ -1.13
LINC01049-201ENST00000426840 MAPK13O15264 365 aa8.02□□□□□ -1.13
LINC01049-201ENST00000426840 NFICP08651 508 aa8.02□□□□□ -1.13
LINC01049-201ENST00000426840 PTMSP20962 102 aa8.02□□□□□ -1.13
LINC01049-201ENST00000426840 NR2F2P24468 414 aa8.02□□□□□ -1.13
LINC01049-201ENST00000426840 RPL13P26373 211 aaKnown RBP8.02□□□□□ -1.13
LINC01049-201ENST00000426840 LRPAP1P30533 357 aa8.02□□□□□ -1.13
LINC01049-201ENST00000426840 RPL9P32969 192 aaKnown RBP8.02□□□□□ -1.13
LINC01049-201ENST00000426840 CLCNKBP51801 687 aa8.02□□□□□ -1.13
LINC01049-201ENST00000426840 GUCY2FP51841 1108 aa8.02□□□□□ -1.13
LINC01049-201ENST00000426840 STX17P56962 302 aa8.02□□□□□ -1.13
LINC01049-201ENST00000426840 ERVFC1P60507 584 aa8.02□□□□□ -1.13
LINC01049-201ENST00000426840 CLDN10P78369 228 aa8.02□□□□□ -1.13
LINC01049-201ENST00000426840 FKBP3Q00688 224 aaKnown RBP8.02□□□□□ -1.13
LINC01049-201ENST00000426840 LRRC63Q05C16 580 aa8.02□□□□□ -1.13
LINC01049-201ENST00000426840 STIM1Q13586 685 aa8.02□□□□□ -1.13
LINC01049-201ENST00000426840 SURF1Q15526 300 aa8.02□□□□□ -1.13
LINC01049-201ENST00000426840 NFKBIBQ15653 356 aa8.02□□□□□ -1.13
LINC01049-201ENST00000426840 UPP1Q16831 310 aa8.02□□□□□ -1.13
LINC01049-201ENST00000426840 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.02□□□□□ -1.13
LINC01049-201ENST00000426840 DPCR1Q3MIW9 517 aa8.02□□□□□ -1.13
LINC01049-201ENST00000426840 C1orf220Q5T0J3 134 aa8.02□□□□□ -1.13
LINC01049-201ENST00000426840 CEP135Q66GS9 1140 aa8.02□□□□□ -1.13
LINC01049-201ENST00000426840 KLHL10Q6JEL2 608 aa8.02□□□□□ -1.13
LINC01049-201ENST00000426840 CAVIN1Q6NZI2 390 aaKnown RBP8.02□□□□□ -1.13
LINC01049-201ENST00000426840 TAS1R1Q7RTX1 841 aa8.02□□□□□ -1.13
LINC01049-201ENST00000426840 FILIP1Q7Z7B0 1213 aa8.02□□□□□ -1.13
LINC01049-201ENST00000426840 DDX53Q86TM3 631 aaKnown RBP8.02□□□□□ -1.13
LINC01049-201ENST00000426840 NT5DC4Q86YG4 428 aa8.02□□□□□ -1.13
LINC01049-201ENST00000426840 RNF168Q8IYW5 571 aaPredicted RBP8.02□□□□□ -1.13
LINC01049-201ENST00000426840 OR5B17Q8NGF7 314 aa8.02□□□□□ -1.13
LINC01049-201ENST00000426840 CXorf38Q8TB03 319 aa8.02□□□□□ -1.13
LINC01049-201ENST00000426840 RNF217Q8TC41 542 aa8.02□□□□□ -1.13
LINC01049-201ENST00000426840 PARD3BQ8TEW8 1205 aa8.02□□□□□ -1.13
LINC01049-201ENST00000426840 GDPD5Q8WTR4 605 aa8.02□□□□□ -1.13
LINC01049-201ENST00000426840 NOC3LQ8WTT2 800 aaKnown RBP8.02□□□□□ -1.13
LINC01049-201ENST00000426840 POF1BQ8WVV4 589 aa8.02□□□□□ -1.13
LINC01049-201ENST00000426840 NELFBQ8WX92 580 aa8.02□□□□□ -1.13
LINC01049-201ENST00000426840 EEF2KMTQ96G04 330 aa8.02□□□□□ -1.13
LINC01049-201ENST00000426840 FAM84AQ96KN4 292 aa8.02□□□□□ -1.13
LINC01049-201ENST00000426840 UROC1Q96N76 676 aa8.02□□□□□ -1.13
LINC01049-201ENST00000426840 POP1Q99575 1024 aaKnown RBP8.02□□□□□ -1.13
LINC01049-201ENST00000426840 CDX2Q99626 313 aaPredicted RBP8.02□□□□□ -1.13
LINC01049-201ENST00000426840 C11orf84Q9BUA3 381 aaPredicted RBP8.02□□□□□ -1.13
LINC01049-201ENST00000426840 VN1R3Q9BXE9 311 aa8.02□□□□□ -1.13
LINC01049-201ENST00000426840 GPR62Q9BZJ7 368 aa8.02□□□□□ -1.13
LINC01049-201ENST00000426840 SLC38A7Q9NVC3 462 aa8.02□□□□□ -1.13
LINC01049-201ENST00000426840 INTS13Q9NVM9 706 aa8.02□□□□□ -1.13
LINC01049-201ENST00000426840 LMCD1Q9NZU5 365 aa8.02□□□□□ -1.13
LINC01049-201ENST00000426840 NXF1Q9UBU9 619 aaKnown RBP8.02□□□□□ -1.13
LINC01049-201ENST00000426840 TUBGCP4Q9UGJ1 667 aa8.02□□□□□ -1.13
LINC01049-201ENST00000426840 LZTS1Q9Y250 596 aa8.02□□□□□ -1.13
LINC01049-201ENST00000426840 PRG3Q9Y2Y8 225 aaPredicted RBP8.02□□□□□ -1.13
LINC01049-201ENST00000426840 C2CD2Q9Y426 696 aa8.02□□□□□ -1.13
LINC01049-201ENST00000426840 PTPRJQ12913 1337 aa8.02□□□□□ -1.13
LINC01049-201ENST00000426840 PLXNA4Q9HCM2 1894 aa8.01□□□□□ -1.13
LINC01049-201ENST00000426840 TMEM189-UBE2V1I3L0A0 370 aa8.01□□□□□ -1.13
LINC01049-201ENST00000426840 PODXLO00592 558 aa8.01□□□□□ -1.13
LINC01049-201ENST00000426840 PIRO00625 290 aa8.01□□□□□ -1.13
LINC01049-201ENST00000426840 PPEF2O14830 753 aa8.01□□□□□ -1.13
LINC01049-201ENST00000426840 FSCN2O14926 492 aa8.01□□□□□ -1.13
LINC01049-201ENST00000426840 CETN3O15182 167 aa8.01□□□□□ -1.13
LINC01049-201ENST00000426840 XPOTO43592 962 aaKnown RBP8.01□□□□□ -1.13
LINC01049-201ENST00000426840 TADA2AO75478 443 aa8.01□□□□□ -1.13
LINC01049-201ENST00000426840 WFS1O76024 890 aa8.01□□□□□ -1.13
LINC01049-201ENST00000426840 STAU1O95793 577 aaKnown RBP8.01□□□□□ -1.13
LINC01049-201ENST00000426840 CST3P01034 146 aaPredicted RBP8.01□□□□□ -1.13
LINC01049-201ENST00000426840 C4BPAP04003 597 aaKnown RBP8.01□□□□□ -1.13
LINC01049-201ENST00000426840 IRS1P35568 1242 aa8.01□□□□□ -1.13
LINC01049-201ENST00000426840 PPM1AP35813 382 aa8.01□□□□□ -1.13
LINC01049-201ENST00000426840 PSMC2P35998 433 aaKnown RBP8.01□□□□□ -1.13
LINC01049-201ENST00000426840 DLG4P78352 724 aa8.01□□□□□ -1.13
LINC01049-201ENST00000426840 KRT17Q04695 432 aa8.01□□□□□ -1.13
LINC01049-201ENST00000426840 UBE3AQ05086 875 aa8.01□□□□□ -1.13
LINC01049-201ENST00000426840 PAK1Q13153 545 aa8.01□□□□□ -1.13
LINC01049-201ENST00000426840 HSP90AA2PQ14568 343 aaPredicted RBP8.01□□□□□ -1.13
LINC01049-201ENST00000426840 TMEM132DQ14C87 1099 aa8.01□□□□□ -1.13
LINC01049-201ENST00000426840 DUOXA2Q1HG44 320 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms