RNA–Protein interactions for RNA: ENST00000426778.5

ERCC3-202, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 2,916 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-202ENST00000426778 BRWD3Q6RI45 1802 aa15.21■□□□□ 0.03
ERCC3-202ENST00000426778 CST3P01034 146 aaPredicted RBP15.21■□□□□ 0.03
ERCC3-202ENST00000426778 CYP1A1P04798 512 aaPredicted RBP15.21■□□□□ 0.03
ERCC3-202ENST00000426778 KLRC2P26717 231 aa15.21■□□□□ 0.03
ERCC3-202ENST00000426778 MSH2P43246 934 aa15.21■□□□□ 0.03
ERCC3-202ENST00000426778 KRT76Q01546 638 aa15.21■□□□□ 0.03
ERCC3-202ENST00000426778 CUL2Q13617 745 aa15.21■□□□□ 0.03
ERCC3-202ENST00000426778 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.21■□□□□ 0.03
ERCC3-202ENST00000426778 DNAH12Q6ZR08 3092 aa15.21■□□□□ 0.03
ERCC3-202ENST00000426778 LOXHD1Q8IVV2 1947 aa15.21■□□□□ 0.03
ERCC3-202ENST00000426778 LRRD1A4D1F6 860 aa15.21■□□□□ 0.03
ERCC3-202ENST00000426778 CA4P22748 312 aa15.21■□□□□ 0.03
ERCC3-202ENST00000426778 ATP5DP30049 168 aa15.21■□□□□ 0.03
ERCC3-202ENST00000426778 TNFSF9P41273 254 aa15.21■□□□□ 0.03
ERCC3-202ENST00000426778 HIRAP54198 1017 aaPredicted RBP15.21■□□□□ 0.03
ERCC3-202ENST00000426778 ZNF252P-AS1Q0IIN9 211 aa15.21■□□□□ 0.03
ERCC3-202ENST00000426778 OVGP1Q12889 678 aa15.21■□□□□ 0.03
ERCC3-202ENST00000426778 SLC1A5Q15758 541 aa15.21■□□□□ 0.03
ERCC3-202ENST00000426778 CCNG2Q16589 344 aa15.21■□□□□ 0.03
ERCC3-202ENST00000426778 ZACNQ401N2 412 aa15.21■□□□□ 0.03
ERCC3-202ENST00000426778 CRELD2Q6UXH1 353 aaPredicted RBP15.21■□□□□ 0.03
ERCC3-202ENST00000426778 ARHGEF18Q6ZSZ5 1173 aa15.21■□□□□ 0.03
ERCC3-202ENST00000426778 VSIG1Q86XK7 387 aa15.21■□□□□ 0.03
ERCC3-202ENST00000426778 ASAP3Q8TDY4 903 aa15.21■□□□□ 0.03
ERCC3-202ENST00000426778 TRABDQ9H4I3 376 aa15.21■□□□□ 0.03
ERCC3-202ENST00000426778 CYP26B1Q9NR63 512 aa15.21■□□□□ 0.03
ERCC3-202ENST00000426778 ANKEF1Q9NU02 776 aa15.21■□□□□ 0.03
ERCC3-202ENST00000426778 FAM47DPA6NHR8 397 aa15.2■□□□□ 0.02
ERCC3-202ENST00000426778 SGK1O00141 431 aa15.2■□□□□ 0.02
ERCC3-202ENST00000426778 CBX6O95503 412 aa15.2■□□□□ 0.02
ERCC3-202ENST00000426778 C4BPAP04003 597 aaKnown RBP15.2■□□□□ 0.02
ERCC3-202ENST00000426778 WEE2P0C1S8 567 aa15.2■□□□□ 0.02
ERCC3-202ENST00000426778 SSTR1P30872 391 aa15.2■□□□□ 0.02
ERCC3-202ENST00000426778 GTF2H1P32780 548 aa15.2■□□□□ 0.02
ERCC3-202ENST00000426778 POLGP54098 1239 aaPredicted RBP15.2■□□□□ 0.02
ERCC3-202ENST00000426778 LIN9Q5TKA1 542 aa15.2■□□□□ 0.02
ERCC3-202ENST00000426778 SNRNP48Q6IEG0 339 aaKnown RBP15.2■□□□□ 0.02
ERCC3-202ENST00000426778 ABRAQ8N0Z2 381 aa15.2■□□□□ 0.02
ERCC3-202ENST00000426778 MAML1Q92585 1016 aa15.2■□□□□ 0.02
ERCC3-202ENST00000426778 UTP4Q969X6 686 aaKnown RBP15.2■□□□□ 0.02
ERCC3-202ENST00000426778 IFT74Q96LB3 600 aa15.2■□□□□ 0.02
ERCC3-202ENST00000426778 MAGEB18Q96M61 343 aa15.2■□□□□ 0.02
ERCC3-202ENST00000426778 GMLQ99445 158 aa15.2■□□□□ 0.02
ERCC3-202ENST00000426778 ZWILCHQ9H900 591 aa15.2■□□□□ 0.02
ERCC3-202ENST00000426778 RXFP1Q9HBX9 757 aa15.2■□□□□ 0.02
ERCC3-202ENST00000426778 PRKAG3Q9UGI9 489 aa15.2■□□□□ 0.02
ERCC3-202ENST00000426778 PHTF1Q9UMS5 762 aa15.2■□□□□ 0.02
ERCC3-202ENST00000426778 SUFUQ9UMX1 484 aa15.2■□□□□ 0.02
ERCC3-202ENST00000426778 H0Y3Z8 333 aa15.2■□□□□ 0.02
ERCC3-202ENST00000426778 OSTNP61366 133 aa15.2■□□□□ 0.02
ERCC3-202ENST00000426778 SP2Q02086 613 aa15.2■□□□□ 0.02
ERCC3-202ENST00000426778 PDIA2Q13087 525 aaKnown RBP15.2■□□□□ 0.02
ERCC3-202ENST00000426778 ZNF268Q14587 947 aaPredicted RBP15.2■□□□□ 0.02
ERCC3-202ENST00000426778 AVENQ9NQS1 362 aaPredicted RBP15.2■□□□□ 0.02
ERCC3-202ENST00000426778 PMM2O15305 246 aa15.2■□□□□ 0.02
ERCC3-202ENST00000426778 STBD1O95210 358 aa15.2■□□□□ 0.02
ERCC3-202ENST00000426778 PAX7P23759 505 aa15.2■□□□□ 0.02
ERCC3-202ENST00000426778 SLC1A1P43005 524 aa15.2■□□□□ 0.02
ERCC3-202ENST00000426778 GDF10P55107 478 aa15.2■□□□□ 0.02
ERCC3-202ENST00000426778 ACTR2P61160 394 aa15.2■□□□□ 0.02
ERCC3-202ENST00000426778 STRN3Q13033 797 aa15.2■□□□□ 0.02
ERCC3-202ENST00000426778 MTFR1Q15390 333 aa15.2■□□□□ 0.02
ERCC3-202ENST00000426778 DCUN1D2Q6PH85 259 aa15.2■□□□□ 0.02
ERCC3-202ENST00000426778 C15orf39Q6ZRI6 1047 aa15.2■□□□□ 0.02
ERCC3-202ENST00000426778 FAM167BQ9BTA0 163 aa15.2■□□□□ 0.02
ERCC3-202ENST00000426778 MSTO1Q9BUK6 570 aa15.2■□□□□ 0.02
ERCC3-202ENST00000426778 NKX1-2Q9UD57 310 aaPredicted RBP15.2■□□□□ 0.02
ERCC3-202ENST00000426778 DCTN4Q9UJW0 460 aa15.2■□□□□ 0.02
ERCC3-202ENST00000426778 SYNPO2Q9UMS6 1093 aa15.2■□□□□ 0.02
ERCC3-202ENST00000426778 CHKBQ9Y259 395 aa15.2■□□□□ 0.02
ERCC3-202ENST00000426778 CFAP73A6NFT4 308 aa15.19■□□□□ 0.02
ERCC3-202ENST00000426778 WDR46O15213 610 aaKnown RBP15.19■□□□□ 0.02
ERCC3-202ENST00000426778 LIASO43766 372 aa15.19■□□□□ 0.02
ERCC3-202ENST00000426778 EXTL3O43909 919 aa15.19■□□□□ 0.02
ERCC3-202ENST00000426778 WDR72Q3MJ13 1102 aa15.19■□□□□ 0.02
ERCC3-202ENST00000426778 ANKRD22Q5VYY1 191 aa15.19■□□□□ 0.02
ERCC3-202ENST00000426778 TLDC1Q6P9B6 456 aa15.19■□□□□ 0.02
ERCC3-202ENST00000426778 NIPA1Q7RTP0 329 aa15.19■□□□□ 0.02
ERCC3-202ENST00000426778 USP37Q86T82 979 aa15.19■□□□□ 0.02
ERCC3-202ENST00000426778 TRABD2AQ86V40 505 aa15.19■□□□□ 0.02
ERCC3-202ENST00000426778 LRRN4Q8WUT4 740 aa15.19■□□□□ 0.02
ERCC3-202ENST00000426778 ZNF606Q8WXB4 792 aa15.19■□□□□ 0.02
ERCC3-202ENST00000426778 CCDC77Q9BR77 488 aa15.19■□□□□ 0.02
ERCC3-202ENST00000426778 MAK16Q9BXY0 300 aaKnown RBP15.19■□□□□ 0.02
ERCC3-202ENST00000426778 ATP6V0A4Q9HBG4 840 aa15.19■□□□□ 0.02
ERCC3-202ENST00000426778 WDR81Q562E7 1941 aa15.19■□□□□ 0.02
ERCC3-202ENST00000426778 PLA2G6O60733 806 aa15.19■□□□□ 0.02
ERCC3-202ENST00000426778 ITGBL1O95965 494 aaPredicted RBP15.19■□□□□ 0.02
ERCC3-202ENST00000426778 KCNA2P16389 499 aa15.19■□□□□ 0.02
ERCC3-202ENST00000426778 SFNP31947 248 aa15.19■□□□□ 0.02
ERCC3-202ENST00000426778 IL9RQ01113 521 aa15.19■□□□□ 0.02
ERCC3-202ENST00000426778 SAMD3Q8N6K7 520 aa15.19■□□□□ 0.02
ERCC3-202ENST00000426778 FEZF2Q8TBJ5 459 aa15.19■□□□□ 0.02
ERCC3-202ENST00000426778 ZNF570Q96NI8 536 aa15.19■□□□□ 0.02
ERCC3-202ENST00000426778 SLITRK1Q96PX8 696 aa15.19■□□□□ 0.02
ERCC3-202ENST00000426778 JPH1Q9HDC5 661 aaPredicted RBP15.19■□□□□ 0.02
ERCC3-202ENST00000426778 NUMBLQ9Y6R0 609 aa15.19■□□□□ 0.02
ERCC3-202ENST00000426778 ERFP50548 548 aa15.18■□□□□ 0.02
ERCC3-202ENST00000426778 PTP4A2Q12974 167 aa15.18■□□□□ 0.02
ERCC3-202ENST00000426778 EMC2Q15006 297 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms