RNA–Protein interactions for RNA: ENST00000426726.7

RUNDC3A-202, Transcript of RUN domain containing 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RUNDC3A, Length 2,048 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3A-202ENST00000426726 RNF39Q9H2S5 420 aa24.42■■□□□ 1.5
RUNDC3A-202ENST00000426726 CTTNBP2NLQ9P2B4 639 aa24.42■■□□□ 1.5
RUNDC3A-202ENST00000426726 LSM8O95777 96 aaKnown RBP24.42■■□□□ 1.5
RUNDC3A-202ENST00000426726 CYP1A2P05177 515 aa24.42■■□□□ 1.5
RUNDC3A-202ENST00000426726 ATF7P17544 494 aaPredicted RBP24.42■■□□□ 1.5
RUNDC3A-202ENST00000426726 CYP3A5P20815 502 aa24.42■■□□□ 1.5
RUNDC3A-202ENST00000426726 RAP1GAPP47736 663 aa24.42■■□□□ 1.5
RUNDC3A-202ENST00000426726 NOMO3P69849 1222 aa24.42■■□□□ 1.5
RUNDC3A-202ENST00000426726 PAK2Q13177 524 aa24.42■■□□□ 1.5
RUNDC3A-202ENST00000426726 DAAM2Q86T65 1068 aa24.42■■□□□ 1.5
RUNDC3A-202ENST00000426726 C18orf25Q96B23 403 aaPredicted RBP24.42■■□□□ 1.5
RUNDC3A-202ENST00000426726 UVRAGQ9P2Y5 699 aa24.42■■□□□ 1.5
RUNDC3A-202ENST00000426726 CENPFP49454 3210 aa24.41■■□□□ 1.5
RUNDC3A-202ENST00000426726 NCK2O43639 380 aa24.41■■□□□ 1.5
RUNDC3A-202ENST00000426726 ZNF394Q53GI3 561 aa24.41■■□□□ 1.5
RUNDC3A-202ENST00000426726 NAA35Q5VZE5 725 aa24.41■■□□□ 1.5
RUNDC3A-202ENST00000426726 SH3TC2Q8TF17 1288 aa24.41■■□□□ 1.5
RUNDC3A-202ENST00000426726 CYFIP2Q96F07 1278 aa24.41■■□□□ 1.5
RUNDC3A-202ENST00000426726 AGO3Q9H9G7 860 aaKnown RBP24.41■■□□□ 1.5
RUNDC3A-202ENST00000426726 KLK14Q9P0G3 267 aa24.41■■□□□ 1.5
RUNDC3A-202ENST00000426726 PADI3Q9ULW8 664 aa24.41■■□□□ 1.5
RUNDC3A-202ENST00000426726 SRGAP2O75044 1071 aa24.4■■□□□ 1.5
RUNDC3A-202ENST00000426726 CILPO75339 1184 aa24.4■■□□□ 1.5
RUNDC3A-202ENST00000426726 RAB27AP51159 221 aa24.4■■□□□ 1.5
RUNDC3A-202ENST00000426726 TUBB4BP68371 445 aa24.4■■□□□ 1.5
RUNDC3A-202ENST00000426726 INCA1Q0VD86 236 aa24.4■■□□□ 1.5
RUNDC3A-202ENST00000426726 NAA30Q147X3 362 aaPredicted RBP24.4■■□□□ 1.5
RUNDC3A-202ENST00000426726 C9orf57Q5W0N0 161 aa24.4■■□□□ 1.5
RUNDC3A-202ENST00000426726 ZNF560Q96MR9 790 aa24.4■■□□□ 1.5
RUNDC3A-202ENST00000426726 TRAIPQ9BWF2 469 aa24.4■■□□□ 1.5
RUNDC3A-202ENST00000426726 PCDHGC3Q9UN70 934 aa24.4■■□□□ 1.5
RUNDC3A-202ENST00000426726 COG5Q9UP83 839 aa24.4■■□□□ 1.5
RUNDC3A-202ENST00000426726 CTAGE15A4D2H0 777 aa24.4■■□□□ 1.5
RUNDC3A-202ENST00000426726 BUB1BO60566 1050 aaPredicted RBP24.4■■□□□ 1.5
RUNDC3A-202ENST00000426726 CTAGE8P0CG41 777 aa24.4■■□□□ 1.5
RUNDC3A-202ENST00000426726 GHRP10912 638 aa24.4■■□□□ 1.5
RUNDC3A-202ENST00000426726 CDH8P55286 799 aa24.4■■□□□ 1.5
RUNDC3A-202ENST00000426726 LPIN1Q14693 890 aa24.4■■□□□ 1.5
RUNDC3A-202ENST00000426726 PEX26Q7Z412 305 aa24.4■■□□□ 1.5
RUNDC3A-202ENST00000426726 CTAGE6Q86UF2 777 aa24.4■■□□□ 1.5
RUNDC3A-202ENST00000426726 CTAGE4Q8IX94 777 aa24.4■■□□□ 1.5
RUNDC3A-202ENST00000426726 MCOLN2Q8IZK6 566 aa24.4■■□□□ 1.5
RUNDC3A-202ENST00000426726 UBXN4Q92575 508 aa24.4■■□□□ 1.5
RUNDC3A-202ENST00000426726 GOLGA1Q92805 767 aa24.4■■□□□ 1.5
RUNDC3A-202ENST00000426726 VCPIP1Q96JH7 1222 aa24.4■■□□□ 1.5
RUNDC3A-202ENST00000426726 AVENQ9NQS1 362 aaPredicted RBP24.4■■□□□ 1.5
RUNDC3A-202ENST00000426726 PTPN22Q9Y2R2 807 aa24.4■■□□□ 1.5
RUNDC3A-202ENST00000426726 GTF3C5Q9Y5Q8 519 aaPredicted RBP24.4■■□□□ 1.5
RUNDC3A-202ENST00000426726 MED7O43513 233 aa24.39■■□□□ 1.5
RUNDC3A-202ENST00000426726 ITGA4P13612 1032 aa24.39■■□□□ 1.5
RUNDC3A-202ENST00000426726 BRD2P25440 801 aaKnown RBP24.39■■□□□ 1.5
RUNDC3A-202ENST00000426726 CD52P31358 61 aa24.39■■□□□ 1.5
RUNDC3A-202ENST00000426726 PNPLA4P41247 253 aa24.39■■□□□ 1.5
RUNDC3A-202ENST00000426726 RAD23BP54727 409 aa24.39■■□□□ 1.5
RUNDC3A-202ENST00000426726 RPS6KA1Q15418 735 aa24.39■■□□□ 1.5
RUNDC3A-202ENST00000426726 C11orf63Q6NUN7 778 aa24.39■■□□□ 1.5
RUNDC3A-202ENST00000426726 CPA5Q8WXQ8 436 aa24.39■■□□□ 1.5
RUNDC3A-202ENST00000426726 RPGRIP1Q96KN7 1286 aa24.39■■□□□ 1.5
RUNDC3A-202ENST00000426726 ZNF518BQ9C0D4 1074 aa24.39■■□□□ 1.5
RUNDC3A-202ENST00000426726 BARX2Q9UMQ3 279 aaPredicted RBP24.39■■□□□ 1.5
RUNDC3A-202ENST00000426726 FAM170AA1A519 330 aa24.39■■□□□ 1.49
RUNDC3A-202ENST00000426726 ZNF618Q5T7W0 954 aa24.39■■□□□ 1.49
RUNDC3A-202ENST00000426726 MON1BQ7L1V2 547 aa24.39■■□□□ 1.49
RUNDC3A-202ENST00000426726 PHF13Q86YI8 300 aaPredicted RBP24.39■■□□□ 1.49
RUNDC3A-202ENST00000426726 PASD1Q8IV76 773 aa24.39■■□□□ 1.49
RUNDC3A-202ENST00000426726 MMS19Q96T76 1030 aa24.39■■□□□ 1.49
RUNDC3A-202ENST00000426726 CNOT8Q9UFF9 292 aaKnown RBP24.39■■□□□ 1.49
RUNDC3A-202ENST00000426726 CEP83Q9Y592 693 aa24.39■■□□□ 1.49
RUNDC3A-202ENST00000426726 SCN1AP35498 2009 aa24.38■■□□□ 1.49
RUNDC3A-202ENST00000426726 ARVCFO00192 962 aa24.38■■□□□ 1.49
RUNDC3A-202ENST00000426726 DNM1LO00429 736 aa24.38■■□□□ 1.49
RUNDC3A-202ENST00000426726 KIF4AO95239 1232 aa24.38■■□□□ 1.49
RUNDC3A-202ENST00000426726 TFRCP02786 760 aaKnown RBP24.38■■□□□ 1.49
RUNDC3A-202ENST00000426726 NT5DC3Q86UY8 548 aa24.38■■□□□ 1.49
RUNDC3A-202ENST00000426726 ZNF564Q8TBZ8 553 aaPredicted RBP24.38■■□□□ 1.49
RUNDC3A-202ENST00000426726 CAGE1Q8TC20 777 aa24.38■■□□□ 1.49
RUNDC3A-202ENST00000426726 WHAMMQ8TF30 809 aa24.38■■□□□ 1.49
RUNDC3A-202ENST00000426726 CAPZA3Q96KX2 299 aa24.38■■□□□ 1.49
RUNDC3A-202ENST00000426726 NUP85Q9BW27 656 aa24.38■■□□□ 1.49
RUNDC3A-202ENST00000426726 UNC93B1Q9H1C4 597 aa24.38■■□□□ 1.49
RUNDC3A-202ENST00000426726 ABCB6Q9NP58 842 aa24.38■■□□□ 1.49
RUNDC3A-202ENST00000426726 NOL12Q9UGY1 213 aaKnown RBP eCLIP24.38■■□□□ 1.49
RUNDC3A-202ENST00000426726 AMFRQ9UKV5 643 aa24.38■■□□□ 1.49
RUNDC3A-202ENST00000426726 V9GYY5 206 aaPredicted RBP24.38■■□□□ 1.49
RUNDC3A-202ENST00000426726 PIRO00625 290 aa24.37■■□□□ 1.49
RUNDC3A-202ENST00000426726 CES2O00748 559 aa24.37■■□□□ 1.49
RUNDC3A-202ENST00000426726 ATMINO43313 823 aaPredicted RBP24.37■■□□□ 1.49
RUNDC3A-202ENST00000426726 CFHP08603 1231 aa24.37■■□□□ 1.49
RUNDC3A-202ENST00000426726 CKBP12277 381 aa24.37■■□□□ 1.49
RUNDC3A-202ENST00000426726 C1QBPQ07021 282 aaKnown RBP24.37■■□□□ 1.49
RUNDC3A-202ENST00000426726 RSRC2Q7L4I2 434 aaKnown RBP24.37■■□□□ 1.49
RUNDC3A-202ENST00000426726 SLC4A11Q8NBS3 891 aa24.37■■□□□ 1.49
RUNDC3A-202ENST00000426726 TMEM35BQ8NCS4 154 aa24.37■■□□□ 1.49
RUNDC3A-202ENST00000426726 TMEM176AQ96HP8 235 aa24.37■■□□□ 1.49
RUNDC3A-202ENST00000426726 TRPV6Q9H1D0 765 aa24.37■■□□□ 1.49
RUNDC3A-202ENST00000426726 GOLPH3Q9H4A6 298 aa24.37■■□□□ 1.49
RUNDC3A-202ENST00000426726 PAK6Q9NQU5 681 aaPredicted RBP24.37■■□□□ 1.49
RUNDC3A-202ENST00000426726 SLC38A7Q9NVC3 462 aa24.37■■□□□ 1.49
RUNDC3A-202ENST00000426726 RNF14Q9UBS8 474 aa24.37■■□□□ 1.49
RUNDC3A-202ENST00000426726 STXBP5LQ9Y2K9 1186 aa24.37■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms