RNA–Protein interactions for RNA: ENST00000425836.6

VEGFA-209, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,575 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-209ENST00000425836 MYL5Q02045 173 aa26.3■■□□□ 1.8
VEGFA-209ENST00000425836 CREMQ03060 361 aa26.3■■□□□ 1.8
VEGFA-209ENST00000425836 SGSM1Q2NKQ1 1148 aa26.3■■□□□ 1.8
VEGFA-209ENST00000425836 WSCD1Q658N2 575 aa26.3■■□□□ 1.8
VEGFA-209ENST00000425836 RSPO2Q6UXX9 243 aaPredicted RBP26.3■■□□□ 1.8
VEGFA-209ENST00000425836 FAM114A1Q8IWE2 563 aa26.3■■□□□ 1.8
VEGFA-209ENST00000425836 MAFAQ8NHW3 353 aaPredicted RBP26.3■■□□□ 1.8
VEGFA-209ENST00000425836 ELMO3Q96BJ8 720 aa26.3■■□□□ 1.8
VEGFA-209ENST00000425836 CDCA3Q99618 268 aaPredicted RBP26.3■■□□□ 1.8
VEGFA-209ENST00000425836 DSEQ9UL01 958 aa26.3■■□□□ 1.8
VEGFA-209ENST00000425836 L1RE1Q9UN81 338 aa26.3■■□□□ 1.8
VEGFA-209ENST00000425836 PRRC2BQ5JSZ5 2229 aaKnown RBP26.3■■□□□ 1.8
VEGFA-209ENST00000425836 TBC1D4O60343 1298 aa26.29■■□□□ 1.8
VEGFA-209ENST00000425836 FMO5P49326 533 aa26.29■■□□□ 1.8
VEGFA-209ENST00000425836 YWHAHQ04917 246 aaPredicted RBP26.29■■□□□ 1.8
VEGFA-209ENST00000425836 KCNH2Q12809 1159 aa26.29■■□□□ 1.8
VEGFA-209ENST00000425836 ZNF699Q32M78 642 aa26.29■■□□□ 1.8
VEGFA-209ENST00000425836 WDR72Q3MJ13 1102 aa26.29■■□□□ 1.8
VEGFA-209ENST00000425836 LIMS2Q7Z4I7 341 aa26.29■■□□□ 1.8
VEGFA-209ENST00000425836 SEMA4DQ92854 862 aa26.29■■□□□ 1.8
VEGFA-209ENST00000425836 BPIFA3Q9BQP9 254 aa26.29■■□□□ 1.8
VEGFA-209ENST00000425836 FANCLQ9NW38 375 aa26.29■■□□□ 1.8
VEGFA-209ENST00000425836 H7C4K7 107 aa26.29■■□□□ 1.8
VEGFA-209ENST00000425836 ADAM12O43184 909 aa26.29■■□□□ 1.8
VEGFA-209ENST00000425836 HUS1O60921 280 aa26.29■■□□□ 1.8
VEGFA-209ENST00000425836 LRRN2O75325 713 aa26.29■■□□□ 1.8
VEGFA-209ENST00000425836 ASS1P00966 412 aaKnown RBP26.29■■□□□ 1.8
VEGFA-209ENST00000425836 KLRC2P26717 231 aa26.29■■□□□ 1.8
VEGFA-209ENST00000425836 NCAPHQ15003 741 aa26.29■■□□□ 1.8
VEGFA-209ENST00000425836 SOWAHAQ2M3V2 549 aa26.29■■□□□ 1.8
VEGFA-209ENST00000425836 OVOS1Q6IE37 1185 aa26.29■■□□□ 1.8
VEGFA-209ENST00000425836 PDCL2Q8N4E4 241 aa26.29■■□□□ 1.8
VEGFA-209ENST00000425836 TOP6BLQ8N6T0 577 aa26.29■■□□□ 1.8
VEGFA-209ENST00000425836 FBXL13Q8NEE6 735 aa26.29■■□□□ 1.8
VEGFA-209ENST00000425836 PI4K2AQ9BTU6 479 aa26.29■■□□□ 1.8
VEGFA-209ENST00000425836 MAGEC2Q9UBF1 373 aaPredicted RBP26.29■■□□□ 1.8
VEGFA-209ENST00000425836 COQ4Q9Y3A0 265 aa26.29■■□□□ 1.8
VEGFA-209ENST00000425836 SCN1AP35498 2009 aa26.28■■□□□ 1.8
VEGFA-209ENST00000425836 ADH1AP07327 375 aa26.28■■□□□ 1.8
VEGFA-209ENST00000425836 MTIF2P46199 727 aaKnown RBP26.28■■□□□ 1.8
VEGFA-209ENST00000425836 NDUFV1P49821 464 aa26.28■■□□□ 1.8
VEGFA-209ENST00000425836 CTXN3Q4LDR2 81 aa26.28■■□□□ 1.8
VEGFA-209ENST00000425836 CDKAL1Q5VV42 579 aa26.28■■□□□ 1.8
VEGFA-209ENST00000425836 ZNF280DQ6N043 979 aa26.28■■□□□ 1.8
VEGFA-209ENST00000425836 METTL23Q86XA0 190 aa26.28■■□□□ 1.8
VEGFA-209ENST00000425836 GLYCTKQ8IVS8 523 aa26.28■■□□□ 1.8
VEGFA-209ENST00000425836 AOPEPQ8N6M6 819 aa26.28■■□□□ 1.8
VEGFA-209ENST00000425836 TAF4BQ92750 862 aa26.28■■□□□ 1.8
VEGFA-209ENST00000425836 RAB20Q9NX57 234 aa26.28■■□□□ 1.8
VEGFA-209ENST00000425836 NXF1Q9UBU9 619 aaKnown RBP26.28■■□□□ 1.8
VEGFA-209ENST00000425836 FBXL5Q9UKA1 691 aa26.28■■□□□ 1.8
VEGFA-209ENST00000425836 MYO7AQ13402 2215 aa26.27■■□□□ 1.8
VEGFA-209ENST00000425836 KCNJ18B7U540 433 aa26.27■■□□□ 1.8
VEGFA-209ENST00000425836 PMM2O15305 246 aa26.27■■□□□ 1.8
VEGFA-209ENST00000425836 AFPP02771 609 aaKnown RBP26.27■■□□□ 1.8
VEGFA-209ENST00000425836 ZNF165P49910 485 aa26.27■■□□□ 1.8
VEGFA-209ENST00000425836 KCNJ12Q14500 433 aa26.27■■□□□ 1.8
VEGFA-209ENST00000425836 ZNF667Q5HYK9 610 aa26.27■■□□□ 1.8
VEGFA-209ENST00000425836 SPOPLQ6IQ16 392 aa26.27■■□□□ 1.8
VEGFA-209ENST00000425836 DPH6Q7L8W6 267 aa26.27■■□□□ 1.8
VEGFA-209ENST00000425836 EFHBQ8N7U6 833 aa26.27■■□□□ 1.8
VEGFA-209ENST00000425836 MMS19Q96T76 1030 aa26.27■■□□□ 1.8
VEGFA-209ENST00000425836 APOBEC3GQ9HC16 384 aaKnown RBP26.27■■□□□ 1.8
VEGFA-209ENST00000425836 UTP3Q9NQZ2 479 aaKnown RBP eCLIP26.27■■□□□ 1.87e-7■■■■□ 19.4
VEGFA-209ENST00000425836 POLIQ9UNA4 740 aa26.27■■□□□ 1.8
VEGFA-209ENST00000425836 CDY1Q9Y6F8 540 aa26.27■■□□□ 1.8
VEGFA-209ENST00000425836 OR1D2P34982 312 aa26.26■■□□□ 1.79
VEGFA-209ENST00000425836 TNNC1P63316 161 aa26.26■■□□□ 1.79
VEGFA-209ENST00000425836 KCNC3Q14003 757 aa26.26■■□□□ 1.79
VEGFA-209ENST00000425836 COL19A1Q14993 1142 aa26.26■■□□□ 1.79
VEGFA-209ENST00000425836 TCP11X2Q5H9J9 407 aa26.26■■□□□ 1.79
VEGFA-209ENST00000425836 SLC8B1Q6J4K2 584 aa26.26■■□□□ 1.79
VEGFA-209ENST00000425836 DHX40Q8IX18 779 aaKnown RBP26.26■■□□□ 1.79
VEGFA-209ENST00000425836 VN1R2Q8NFZ6 395 aa26.26■■□□□ 1.79
VEGFA-209ENST00000425836 SLC22A17Q8WUG5 538 aa26.26■■□□□ 1.79
VEGFA-209ENST00000425836 LINC01565O15544 149 aa26.25■■□□□ 1.79
VEGFA-209ENST00000425836 NCK2O43639 380 aa26.25■■□□□ 1.79
VEGFA-209ENST00000425836 N4BP1O75113 896 aaKnown RBP26.25■■□□□ 1.79
VEGFA-209ENST00000425836 CLCN4P51793 760 aa26.25■■□□□ 1.79
VEGFA-209ENST00000425836 RBM10P98175 930 aaKnown RBP26.25■■□□□ 1.79
VEGFA-209ENST00000425836 MYL7Q01449 175 aa26.25■■□□□ 1.79
VEGFA-209ENST00000425836 ADAM15Q13444 863 aa26.25■■□□□ 1.79
VEGFA-209ENST00000425836 CTC1Q2NKJ3 1217 aa26.25■■□□□ 1.79
VEGFA-209ENST00000425836 PPFIBP1Q86W92 1011 aa26.25■■□□□ 1.79
VEGFA-209ENST00000425836 PALB2Q86YC2 1186 aa26.25■■□□□ 1.79
VEGFA-209ENST00000425836 TMEM86AQ8N2M4 240 aa26.25■■□□□ 1.79
VEGFA-209ENST00000425836 RTP3Q9BQQ7 232 aa26.25■■□□□ 1.79
VEGFA-209ENST00000425836 IMPG2Q9BZV3 1241 aa26.25■■□□□ 1.79
VEGFA-209ENST00000425836 HCFC2Q9Y5Z7 792 aa26.25■■□□□ 1.79
VEGFA-209ENST00000425836 ATG2AQ2TAZ0 1938 aa26.25■■□□□ 1.79
VEGFA-209ENST00000425836 P4HA2O15460 535 aa26.24■■□□□ 1.79
VEGFA-209ENST00000425836 CLSTN1O94985 981 aa26.24■■□□□ 1.79
VEGFA-209ENST00000425836 EEF1GP26641 437 aaKnown RBP26.24■■□□□ 1.79
VEGFA-209ENST00000425836 NOP14P78316 857 aaKnown RBP26.24■■□□□ 1.79
VEGFA-209ENST00000425836 RAB33AQ14088 237 aa26.24■■□□□ 1.79
VEGFA-209ENST00000425836 SKIV2LQ15477 1246 aaKnown RBP26.24■■□□□ 1.79
VEGFA-209ENST00000425836 ADGRF2Q8IZF7 708 aa26.24■■□□□ 1.79
VEGFA-209ENST00000425836 KBTBD7Q8WVZ9 684 aa26.24■■□□□ 1.79
VEGFA-209ENST00000425836 TUBGCP2Q9BSJ2 902 aa26.24■■□□□ 1.79
VEGFA-209ENST00000425836 OXCT2Q9BYC2 517 aaPredicted RBP26.24■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms