RNA–Protein interactions for RNA: ENST00000424339.1

EPHA4-206, Transcript of EPH receptor A4, humanhuman

TSL 2

Gene EPHA4, Length 492 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-206ENST00000424339 ISM2Q6H9L7 571 aa7.61□□□□□ -1.19
EPHA4-206ENST00000424339 C16orf59Q7L2K0 433 aa7.61□□□□□ -1.19
EPHA4-206ENST00000424339 OTOP2Q7RTS6 562 aa7.61□□□□□ -1.19
EPHA4-206ENST00000424339 FRMD5Q7Z6J6 570 aa7.61□□□□□ -1.19
EPHA4-206ENST00000424339 FILIP1Q7Z7B0 1213 aa7.61□□□□□ -1.19
EPHA4-206ENST00000424339 ZSCAN30Q86W11 494 aa7.61□□□□□ -1.19
EPHA4-206ENST00000424339 BRSK2Q8IWQ3 736 aa7.61□□□□□ -1.19
EPHA4-206ENST00000424339 THNSL1Q8IYQ7 743 aa7.61□□□□□ -1.19
EPHA4-206ENST00000424339 SMG8Q8ND04 991 aaKnown RBP7.61□□□□□ -1.19
EPHA4-206ENST00000424339 ANKRD20A12PQ8NF67 263 aa7.61□□□□□ -1.19
EPHA4-206ENST00000424339 LINC01599Q8WXQ3 324 aa7.61□□□□□ -1.19
EPHA4-206ENST00000424339 ANP32BQ92688 251 aaKnown RBP7.61□□□□□ -1.19
EPHA4-206ENST00000424339 TRIM44Q96DX7 344 aaPredicted RBP7.61□□□□□ -1.19
EPHA4-206ENST00000424339 RNPC3Q96LT9 517 aaKnown RBP7.61□□□□□ -1.19
EPHA4-206ENST00000424339 FNBP1Q96RU3 617 aa7.61□□□□□ -1.19
EPHA4-206ENST00000424339 RPS6KC1Q96S38 1066 aa7.61□□□□□ -1.19
EPHA4-206ENST00000424339 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.61□□□□□ -1.19
EPHA4-206ENST00000424339 CBWD1Q9BRT8 395 aa7.61□□□□□ -1.19
EPHA4-206ENST00000424339 EIF2AQ9BY44 585 aaKnown RBP7.61□□□□□ -1.19
EPHA4-206ENST00000424339 TMEM117Q9H0C3 514 aa7.61□□□□□ -1.19
EPHA4-206ENST00000424339 NXF3Q9H4D5 531 aaKnown RBP7.61□□□□□ -1.19
EPHA4-206ENST00000424339 THAP9Q9H5L6 903 aa7.61□□□□□ -1.19
EPHA4-206ENST00000424339 RSAD1Q9HA92 442 aa7.61□□□□□ -1.19
EPHA4-206ENST00000424339 DNAAF2Q9NVR5 837 aaKnown RBP7.61□□□□□ -1.19
EPHA4-206ENST00000424339 CNTN3Q9P232 1028 aa7.61□□□□□ -1.19
EPHA4-206ENST00000424339 INSL6Q9Y581 213 aa7.61□□□□□ -1.19
EPHA4-206ENST00000424339 TTC26A0AVF1 554 aa7.6□□□□□ -1.19
EPHA4-206ENST00000424339 BECN2A8MW95 431 aa7.6□□□□□ -1.19
EPHA4-206ENST00000424339 N4BP1O75113 896 aaKnown RBP7.6□□□□□ -1.19
EPHA4-206ENST00000424339 DGKIO75912 1065 aa7.6□□□□□ -1.19
EPHA4-206ENST00000424339 GJB5O95377 273 aa7.6□□□□□ -1.19
EPHA4-206ENST00000424339 TPM2P07951 284 aa7.6□□□□□ -1.19
EPHA4-206ENST00000424339 HARSP12081 509 aaKnown RBP7.6□□□□□ -1.19
EPHA4-206ENST00000424339 KCNE1P15382 129 aa7.6□□□□□ -1.19
EPHA4-206ENST00000424339 ATP2A2P16615 1042 aaKnown RBP7.6□□□□□ -1.19
EPHA4-206ENST00000424339 ATF7P17544 494 aaPredicted RBP7.6□□□□□ -1.19
EPHA4-206ENST00000424339 CYP3A5P20815 502 aa7.6□□□□□ -1.19
EPHA4-206ENST00000424339 EEF1GP26641 437 aaKnown RBP7.6□□□□□ -1.19
EPHA4-206ENST00000424339 GTF2H1P32780 548 aa7.6□□□□□ -1.19
EPHA4-206ENST00000424339 CYP2J2P51589 502 aa7.6□□□□□ -1.19
EPHA4-206ENST00000424339 CLDN10P78369 228 aa7.6□□□□□ -1.19
EPHA4-206ENST00000424339 CYP24A1Q07973 514 aa7.6□□□□□ -1.19
EPHA4-206ENST00000424339 GRIK3Q13003 919 aa7.6□□□□□ -1.19
EPHA4-206ENST00000424339 PSMD6Q15008 389 aa7.6□□□□□ -1.19
EPHA4-206ENST00000424339 ANO6Q4KMQ2 910 aa7.6□□□□□ -1.19
EPHA4-206ENST00000424339 CEP135Q66GS9 1140 aa7.6□□□□□ -1.19
EPHA4-206ENST00000424339 LRRC55Q6ZSA7 311 aa7.6□□□□□ -1.19
EPHA4-206ENST00000424339 RTN4RL1Q86UN2 441 aaPredicted RBP7.6□□□□□ -1.19
EPHA4-206ENST00000424339 WDR49Q8IV35 697 aa7.6□□□□□ -1.19
EPHA4-206ENST00000424339 FAM186BQ8IYM0 893 aa7.6□□□□□ -1.19
EPHA4-206ENST00000424339 CMTR2Q8IYT2 770 aaKnown RBP7.6□□□□□ -1.19
EPHA4-206ENST00000424339 TDHQ8IZJ6 230 aa7.6□□□□□ -1.19
EPHA4-206ENST00000424339 LRRC43Q8N309 656 aa7.6□□□□□ -1.19
EPHA4-206ENST00000424339 C1orf216Q8TAB5 229 aa7.6□□□□□ -1.19
EPHA4-206ENST00000424339 FAM200AQ8TCP9 573 aa7.6□□□□□ -1.19
EPHA4-206ENST00000424339 CACTINQ8WUQ7 758 aaKnown RBP7.6□□□□□ -1.19
EPHA4-206ENST00000424339 ZBTB45Q96K62 511 aaPredicted RBP7.6□□□□□ -1.19
EPHA4-206ENST00000424339 SNX27Q96L92 541 aa7.6□□□□□ -1.19
EPHA4-206ENST00000424339 MFSD14AQ96MC6 490 aa7.6□□□□□ -1.19
EPHA4-206ENST00000424339 RAD9AQ99638 391 aa7.6□□□□□ -1.19
EPHA4-206ENST00000424339 FAM213AQ9BRX8 229 aa7.6□□□□□ -1.19
EPHA4-206ENST00000424339 OSBPL7Q9BZF2 842 aa7.6□□□□□ -1.19
EPHA4-206ENST00000424339 DNAJC25Q9H1X3 360 aa7.6□□□□□ -1.19
EPHA4-206ENST00000424339 TSPY26PQ9H489 355 aa7.6□□□□□ -1.19
EPHA4-206ENST00000424339 RBAKQ9NYW8 714 aaPredicted RBP7.6□□□□□ -1.19
EPHA4-206ENST00000424339 MAGEC2Q9UBF1 373 aaPredicted RBP7.6□□□□□ -1.19
EPHA4-206ENST00000424339 STK39Q9UEW8 545 aa7.6□□□□□ -1.19
EPHA4-206ENST00000424339 PARP2Q9UGN5 583 aa7.6□□□□□ -1.19
EPHA4-206ENST00000424339 ARMCX3Q9UH62 379 aaPredicted RBP7.6□□□□□ -1.19
EPHA4-206ENST00000424339 RWDD3Q9Y3V2 267 aa7.6□□□□□ -1.19
EPHA4-206ENST00000424339 TDRD15B5MCY1 1934 aaKnown RBP7.59□□□□□ -1.19
EPHA4-206ENST00000424339 TRIM49BA6NDI0 452 aa7.59□□□□□ -1.19
EPHA4-206ENST00000424339 ARL5CA6NH57 179 aa7.59□□□□□ -1.19
EPHA4-206ENST00000424339 TISP43B9A030 160 aa7.59□□□□□ -1.19
EPHA4-206ENST00000424339 GOLGA6L19H0YKK7 550 aa7.59□□□□□ -1.19
EPHA4-206ENST00000424339 CLIC2O15247 247 aa7.59□□□□□ -1.19
EPHA4-206ENST00000424339 PMM2O15305 246 aa7.59□□□□□ -1.19
EPHA4-206ENST00000424339 AKAP3O75969 853 aa7.59□□□□□ -1.19
EPHA4-206ENST00000424339 THP07101 528 aa7.59□□□□□ -1.19
EPHA4-206ENST00000424339 CXCL8P10145 99 aa7.59□□□□□ -1.19
EPHA4-206ENST00000424339 RPL9P32969 192 aaKnown RBP7.59□□□□□ -1.19
EPHA4-206ENST00000424339 PLA2G4AP47712 749 aa7.59□□□□□ -1.19
EPHA4-206ENST00000424339 ACOT2P49753 483 aa7.59□□□□□ -1.19
EPHA4-206ENST00000424339 PMS1P54277 932 aaKnown RBP7.59□□□□□ -1.19
EPHA4-206ENST00000424339 EPHB4P54760 987 aa7.59□□□□□ -1.19
EPHA4-206ENST00000424339 HTRA4P83105 476 aaPredicted RBP7.59□□□□□ -1.19
EPHA4-206ENST00000424339 CETN1Q12798 172 aa7.59□□□□□ -1.19
EPHA4-206ENST00000424339 BFSP1Q12934 665 aa7.59□□□□□ -1.19
EPHA4-206ENST00000424339 NR1H3Q13133 447 aa7.59□□□□□ -1.19
EPHA4-206ENST00000424339 RAB30Q15771 203 aa7.59□□□□□ -1.19
EPHA4-206ENST00000424339 ENOX2Q16206 610 aaKnown RBP7.59□□□□□ -1.19
EPHA4-206ENST00000424339 SLC10A6Q3KNW5 377 aa7.59□□□□□ -1.19
EPHA4-206ENST00000424339 CCDC40Q4G0X9 1142 aa7.59□□□□□ -1.19
EPHA4-206ENST00000424339 NOMO2Q5JPE7 1267 aa7.59□□□□□ -1.19
EPHA4-206ENST00000424339 CRELD2Q6UXH1 353 aaPredicted RBP7.59□□□□□ -1.19
EPHA4-206ENST00000424339 ALKAL1Q6UXT8 129 aa7.59□□□□□ -1.19
EPHA4-206ENST00000424339 AGMOQ6ZNB7 445 aa7.59□□□□□ -1.19
EPHA4-206ENST00000424339 CDR2LQ86X02 465 aaPredicted RBP7.59□□□□□ -1.19
EPHA4-206ENST00000424339 CBWD2Q8IUF1 395 aa7.59□□□□□ -1.19
EPHA4-206ENST00000424339 HERC6Q8IVU3 1022 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms