RNA–Protein interactions for RNA: ENST00000424265.5

USP54-205, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 2

Gene USP54, Length 5,201 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-205ENST00000424265 SFI1A8K8P3 1242 aa10.34□□□□□ -0.75
USP54-205ENST00000424265 K7ERI5 159 aa10.34□□□□□ -0.75
USP54-205ENST00000424265 FKTNO75072 461 aa10.34□□□□□ -0.75
USP54-205ENST00000424265 EGFRP00533 1210 aa10.34□□□□□ -0.75
USP54-205ENST00000424265 AKR1A1P14550 325 aa10.34□□□□□ -0.75
USP54-205ENST00000424265 MAPK6Q16659 721 aa10.34□□□□□ -0.75
USP54-205ENST00000424265 PIAS4Q8N2W9 510 aaPredicted RBP10.34□□□□□ -0.75
USP54-205ENST00000424265 ANKRD36BP1Q96IX9 119 aa10.34□□□□□ -0.75
USP54-205ENST00000424265 RNPEPL1Q9HAU8 725 aa10.34□□□□□ -0.75
USP54-205ENST00000424265 PRKAG2Q9UGJ0 569 aa10.34□□□□□ -0.75
USP54-205ENST00000424265 GGT7Q9UJ14 662 aa10.34□□□□□ -0.75
USP54-205ENST00000424265 GPC6Q9Y625 555 aaPredicted RBP10.34□□□□□ -0.75
USP54-205ENST00000424265 AKAP11Q9UKA4 1901 aa10.34□□□□□ -0.75
USP54-205ENST00000424265 TLDC2A0PJX2 215 aa10.33□□□□□ -0.76
USP54-205ENST00000424265 NOTOA8MTQ0 251 aa10.33□□□□□ -0.76
USP54-205ENST00000424265 KCNJ18B7U540 433 aa10.33□□□□□ -0.76
USP54-205ENST00000424265 BOLA2-SMG1P6H3BVE0 249 aa10.33□□□□□ -0.76
USP54-205ENST00000424265 TXNDC9O14530 226 aa10.33□□□□□ -0.76
USP54-205ENST00000424265 MEIS2O14770 477 aa10.33□□□□□ -0.76
USP54-205ENST00000424265 ASMTLO95671 621 aa10.33□□□□□ -0.76
USP54-205ENST00000424265 BDNFP23560 247 aa10.33□□□□□ -0.76
USP54-205ENST00000424265 HALP42357 657 aa10.33□□□□□ -0.76
USP54-205ENST00000424265 ACTR2P61160 394 aa10.33□□□□□ -0.76
USP54-205ENST00000424265 TNNC1P63316 161 aa10.33□□□□□ -0.76
USP54-205ENST00000424265 SULT2A1Q06520 285 aa10.33□□□□□ -0.76
USP54-205ENST00000424265 KCNJ12Q14500 433 aa10.33□□□□□ -0.76
USP54-205ENST00000424265 TMTC4Q5T4D3 741 aa10.33□□□□□ -0.76
USP54-205ENST00000424265 DAB2IPQ5VWQ8 1189 aa10.33□□□□□ -0.76
USP54-205ENST00000424265 IER5Q5VY09 327 aa10.33□□□□□ -0.76
USP54-205ENST00000424265 SLC30A10Q6XR72 485 aa10.33□□□□□ -0.76
USP54-205ENST00000424265 ARMCX2Q7L311 632 aa10.33□□□□□ -0.76
USP54-205ENST00000424265 POMGNT1Q8WZA1 660 aa10.33□□□□□ -0.76
USP54-205ENST00000424265 CAPNS2Q96L46 248 aa10.33□□□□□ -0.76
USP54-205ENST00000424265 GCOM2Q9BZD3 368 aaPredicted RBP10.33□□□□□ -0.76
USP54-205ENST00000424265 EPB41L5Q9HCM4 733 aa10.33□□□□□ -0.76
USP54-205ENST00000424265 TBCCD1Q9NVR7 557 aa10.33□□□□□ -0.76
USP54-205ENST00000424265 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.33□□□□□ -0.76
USP54-205ENST00000424265 TDRKHQ9Y2W6 561 aaKnown RBP10.33□□□□□ -0.76
USP54-205ENST00000424265 SCINQ9Y6U3 715 aa10.33□□□□□ -0.76
USP54-205ENST00000424265 TRPA1O75762 1119 aa10.33□□□□□ -0.76
USP54-205ENST00000424265 TFRCP02786 760 aaKnown RBP10.33□□□□□ -0.76
USP54-205ENST00000424265 PDGFRBP09619 1106 aa10.33□□□□□ -0.76
USP54-205ENST00000424265 CYP2C8P10632 490 aa10.33□□□□□ -0.76
USP54-205ENST00000424265 POLR2FP61218 127 aaKnown RBP10.33□□□□□ -0.76
USP54-205ENST00000424265 LRP8Q14114 963 aa10.33□□□□□ -0.76
USP54-205ENST00000424265 PDXDC1Q6P996 788 aa10.33□□□□□ -0.76
USP54-205ENST00000424265 POTEGQ6S5H5 508 aa10.33□□□□□ -0.76
USP54-205ENST00000424265 NLRP7Q8WX94 980 aa10.33□□□□□ -0.76
USP54-205ENST00000424265 TMEM60Q9H2L4 133 aa10.33□□□□□ -0.76
USP54-205ENST00000424265 ZMAT5Q9UDW3 170 aaKnown RBP10.33□□□□□ -0.76
USP54-205ENST00000424265 CASZ1Q86V15 1759 aa10.33□□□□□ -0.76
USP54-205ENST00000424265 E9PMD0 336 aa10.33□□□□□ -0.76
USP54-205ENST00000424265 INO80B-WBP1J3KQ70 363 aa10.33□□□□□ -0.76
USP54-205ENST00000424265 ATP5HO75947 161 aa10.33□□□□□ -0.76
USP54-205ENST00000424265 GSTT2P0CG29 244 aa10.33□□□□□ -0.76
USP54-205ENST00000424265 GSTT2BP0CG30 244 aa10.33□□□□□ -0.76
USP54-205ENST00000424265 TOB1P50616 345 aaPredicted RBP10.33□□□□□ -0.76
USP54-205ENST00000424265 COASYQ13057 564 aa10.33□□□□□ -0.76
USP54-205ENST00000424265 QPCTQ16769 361 aa10.33□□□□□ -0.76
USP54-205ENST00000424265 TREML2Q5T2D2 321 aa10.33□□□□□ -0.76
USP54-205ENST00000424265 MCUR1Q96AQ8 359 aa10.33□□□□□ -0.76
USP54-205ENST00000424265 OCEL1Q9H607 264 aa10.33□□□□□ -0.76
USP54-205ENST00000424265 TRPC7Q9HCX4 862 aa10.33□□□□□ -0.76
USP54-205ENST00000424265 TBC1D23Q9NUY8 699 aa10.33□□□□□ -0.76
USP54-205ENST00000424265 GINS2Q9Y248 185 aa10.33□□□□□ -0.76
USP54-205ENST00000424265 A0A0J9YVX5 310 aa10.33□□□□□ -0.76
USP54-205ENST00000424265 FANCGO15287 622 aa10.33□□□□□ -0.76
USP54-205ENST00000424265 EIF3DO15371 548 aaKnown RBP eCLIP10.33□□□□□ -0.76
USP54-205ENST00000424265 DDX5P17844 614 aaKnown RBP10.33□□□□□ -0.76
USP54-205ENST00000424265 TKTP29401 623 aaKnown RBP10.33□□□□□ -0.76
USP54-205ENST00000424265 CDC25AP30304 524 aa10.33□□□□□ -0.76
USP54-205ENST00000424265 TUBP50607 506 aa10.33□□□□□ -0.76
USP54-205ENST00000424265 NOP14P78316 857 aaKnown RBP10.33□□□□□ -0.76
USP54-205ENST00000424265 EVX2Q03828 476 aa10.33□□□□□ -0.76
USP54-205ENST00000424265 MOB2Q70IA6 237 aa10.33□□□□□ -0.76
USP54-205ENST00000424265 CROCCP3Q8IVE0 287 aa10.33□□□□□ -0.76
USP54-205ENST00000424265 HHIPL1Q96JK4 782 aa10.33□□□□□ -0.76
USP54-205ENST00000424265 TYW1Q9NV66 732 aaKnown RBP10.33□□□□□ -0.76
USP54-205ENST00000424265 GID8Q9NWU2 228 aa10.33□□□□□ -0.76
USP54-205ENST00000424265 HACD3Q9P035 362 aa10.33□□□□□ -0.76
USP54-205ENST00000424265 ANGPTL2Q9UKU9 493 aa10.33□□□□□ -0.76
USP54-205ENST00000424265 LZTS1Q9Y250 596 aa10.33□□□□□ -0.76
USP54-205ENST00000424265 TLL2Q9Y6L7 1015 aa10.33□□□□□ -0.76
USP54-205ENST00000424265 ANKRD31Q8N7Z5 1873 aa10.33□□□□□ -0.76
USP54-205ENST00000424265 MYH1P12882 1939 aa10.32□□□□□ -0.76
USP54-205ENST00000424265 DYNC1LI2O43237 492 aaPredicted RBP10.32□□□□□ -0.76
USP54-205ENST00000424265 DNAJC6O75061 913 aa10.32□□□□□ -0.76
USP54-205ENST00000424265 CABYRO75952 493 aa10.32□□□□□ -0.76
USP54-205ENST00000424265 UBOX5O94941 541 aa10.32□□□□□ -0.76
USP54-205ENST00000424265 ATP1A1P05023 1023 aaKnown RBP10.32□□□□□ -0.76
USP54-205ENST00000424265 VAV1P15498 845 aa10.32□□□□□ -0.76
USP54-205ENST00000424265 MAGOHP61326 146 aaKnown RBP10.32□□□□□ -0.76
USP54-205ENST00000424265 PABPC1LQ4VXU2 614 aaKnown RBP10.32□□□□□ -0.76
USP54-205ENST00000424265 PPP1R2P3Q6NXS1 205 aa10.32□□□□□ -0.76
USP54-205ENST00000424265 C1orf228Q6PIY5 440 aa10.32□□□□□ -0.76
USP54-205ENST00000424265 RASGRP2Q7LDG7 609 aa10.32□□□□□ -0.76
USP54-205ENST00000424265 GPR142Q7Z601 462 aa10.32□□□□□ -0.76
USP54-205ENST00000424265 ZNF467Q7Z7K2 595 aaPredicted RBP10.32□□□□□ -0.76
USP54-205ENST00000424265 MAGOHBQ96A72 148 aaKnown RBP10.32□□□□□ -0.76
USP54-205ENST00000424265 XPO6Q96QU8 1125 aaKnown RBP10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms