RNA–Protein interactions for RNA: ENST00000420973.5

CHRD-204, Transcript of chordin, humanhuman

TSL 1 (best)

Gene CHRD, Length 3,492 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-204ENST00000420973 APEX2Q9UBZ4 518 aa15.34■□□□□ 0.05
CHRD-204ENST00000420973 CNOT8Q9UFF9 292 aaKnown RBP15.34■□□□□ 0.05
CHRD-204ENST00000420973 TBX20Q9UMR3 447 aa15.34■□□□□ 0.05
CHRD-204ENST00000420973 SLC12A4Q9UP95 1085 aa15.34■□□□□ 0.05
CHRD-204ENST00000420973 ABLIM1O14639 778 aa15.34■□□□□ 0.05
CHRD-204ENST00000420973 GLI1P08151 1106 aa15.34■□□□□ 0.05
CHRD-204ENST00000420973 GSTA2P09210 222 aa15.34■□□□□ 0.05
CHRD-204ENST00000420973 OXCT1P55809 520 aa15.34■□□□□ 0.05
CHRD-204ENST00000420973 RCN1Q15293 331 aa15.34■□□□□ 0.05
CHRD-204ENST00000420973 LLGL2Q6P1M3 1020 aa15.34■□□□□ 0.05
CHRD-204ENST00000420973 IRF2BP2Q7Z5L9 587 aa15.34■□□□□ 0.05
CHRD-204ENST00000420973 CAVIN3Q969G5 261 aa15.34■□□□□ 0.05
CHRD-204ENST00000420973 THAP2Q9H0W7 228 aa15.34■□□□□ 0.05
CHRD-204ENST00000420973 TDRKHQ9Y2W6 561 aaKnown RBP15.34■□□□□ 0.05
CHRD-204ENST00000420973 RGS20O76081 388 aa15.34■□□□□ 0.05
CHRD-204ENST00000420973 SGPL1O95470 568 aa15.34■□□□□ 0.05
CHRD-204ENST00000420973 CCDC166P0CW27 439 aa15.34■□□□□ 0.05
CHRD-204ENST00000420973 KCTD2Q14681 263 aa15.34■□□□□ 0.05
CHRD-204ENST00000420973 AADACL2Q6P093 401 aa15.34■□□□□ 0.05
CHRD-204ENST00000420973 ZNF554Q86TJ5 538 aa15.34■□□□□ 0.05
CHRD-204ENST00000420973 GPC2Q8N158 579 aa15.34■□□□□ 0.05
CHRD-204ENST00000420973 OXCT2Q9BYC2 517 aaPredicted RBP15.34■□□□□ 0.05
CHRD-204ENST00000420973 TMBIM4Q9HC24 238 aa15.34■□□□□ 0.05
CHRD-204ENST00000420973 SEL1LQ9UBV2 794 aa15.34■□□□□ 0.05
CHRD-204ENST00000420973 EIF3FO00303 357 aaPredicted RBP15.33■□□□□ 0.05
CHRD-204ENST00000420973 SPOPO43791 374 aa15.33■□□□□ 0.05
CHRD-204ENST00000420973 FTLP02792 175 aaPredicted RBP15.33■□□□□ 0.05
CHRD-204ENST00000420973 POTEJP0CG39 1038 aa15.33■□□□□ 0.05
CHRD-204ENST00000420973 TCP1P17987 556 aaKnown RBP15.33■□□□□ 0.05
CHRD-204ENST00000420973 IREB2P48200 963 aaKnown RBP15.33■□□□□ 0.05
CHRD-204ENST00000420973 PSMD7P51665 324 aa15.33■□□□□ 0.05
CHRD-204ENST00000420973 ITGA7Q13683 1181 aa15.33■□□□□ 0.05
CHRD-204ENST00000420973 BTG3Q14201 252 aaPredicted RBP15.33■□□□□ 0.05
CHRD-204ENST00000420973 DAB2IPQ5VWQ8 1189 aa15.33■□□□□ 0.05
CHRD-204ENST00000420973 LRRC34Q8IZ02 419 aa15.33■□□□□ 0.05
CHRD-204ENST00000420973 SSU72P8A0A1W2PR75 194 aa15.33■□□□□ 0.04
CHRD-204ENST00000420973 BOLA2-SMG1P6H3BVE0 249 aa15.33■□□□□ 0.04
CHRD-204ENST00000420973 PENKP01210 267 aaPredicted RBP15.33■□□□□ 0.04
CHRD-204ENST00000420973 CNPY1Q3B7I2 92 aa15.33■□□□□ 0.04
CHRD-204ENST00000420973 INTS8Q75QN2 995 aaKnown RBP15.33■□□□□ 0.04
CHRD-204ENST00000420973 SLC47A2Q86VL8 602 aa15.33■□□□□ 0.04
CHRD-204ENST00000420973 RHPN2Q8IUC4 686 aa15.33■□□□□ 0.04
CHRD-204ENST00000420973 SCUBE1Q8IWY4 988 aa15.33■□□□□ 0.04
CHRD-204ENST00000420973 MMGT1Q8N4V1 131 aa15.33■□□□□ 0.04
CHRD-204ENST00000420973 NMD3Q96D46 503 aaKnown RBP15.33■□□□□ 0.04
CHRD-204ENST00000420973 CYP26B1Q9NR63 512 aa15.33■□□□□ 0.04
CHRD-204ENST00000420973 EXOC7Q9UPT5 735 aa15.33■□□□□ 0.04
CHRD-204ENST00000420973 GRID2IPA4D2P6 1211 aa15.33■□□□□ 0.04
CHRD-204ENST00000420973 TMEM247A6NEH6 219 aa15.33■□□□□ 0.04
CHRD-204ENST00000420973 NVLO15381 856 aaKnown RBP15.33■□□□□ 0.04
CHRD-204ENST00000420973 COBLL1Q53SF7 1204 aa15.33■□□□□ 0.04
CHRD-204ENST00000420973 ZBTB41Q5SVQ8 909 aa15.33■□□□□ 0.04
CHRD-204ENST00000420973 ARHGEF26Q96DR7 871 aa15.33■□□□□ 0.04
CHRD-204ENST00000420973 AGAP3Q96P47 875 aa15.33■□□□□ 0.04
CHRD-204ENST00000420973 FIZ1Q96SL8 496 aa15.33■□□□□ 0.04
CHRD-204ENST00000420973 ADGRA3Q8IWK6 1321 aa15.32■□□□□ 0.04
CHRD-204ENST00000420973 DCDC2CA8MYV0 355 aa15.32■□□□□ 0.04
CHRD-204ENST00000420973 C19orf81C9J6K1 198 aa15.32■□□□□ 0.04
CHRD-204ENST00000420973 KRIT1O00522 736 aa15.32■□□□□ 0.04
CHRD-204ENST00000420973 EIF3DO15371 548 aaKnown RBP eCLIP15.32■□□□□ 0.045e-6■□□□□ 8.9
CHRD-204ENST00000420973 VPS41P49754 854 aa15.32■□□□□ 0.04
CHRD-204ENST00000420973 EMC2Q15006 297 aa15.32■□□□□ 0.04
CHRD-204ENST00000420973 C6orf183Q5T699 404 aa15.32■□□□□ 0.04
CHRD-204ENST00000420973 FOXB2Q5VYV0 432 aa15.32■□□□□ 0.04
CHRD-204ENST00000420973 CREG2Q8IUH2 290 aa15.32■□□□□ 0.04
CHRD-204ENST00000420973 TMEM130Q8N3G9 435 aa15.32■□□□□ 0.04
CHRD-204ENST00000420973 PLEKHO2Q8TD55 490 aa15.32■□□□□ 0.04
CHRD-204ENST00000420973 FBXO41Q8TF61 875 aa15.32■□□□□ 0.04
CHRD-204ENST00000420973 ASCC2Q9H1I8 757 aaPredicted RBP15.32■□□□□ 0.04
CHRD-204ENST00000420973 SIPA1L1O43166 1804 aa15.32■□□□□ 0.04
CHRD-204ENST00000420973 PDE4DIPQ5VU43 2346 aa15.32■□□□□ 0.04
CHRD-204ENST00000420973 KCNA4P22459 653 aa15.32■□□□□ 0.04
CHRD-204ENST00000420973 FECHP22830 423 aa15.32■□□□□ 0.04
CHRD-204ENST00000420973 TCF7P36402 384 aaPredicted RBP15.32■□□□□ 0.04
CHRD-204ENST00000420973 MTTPP55157 894 aa15.32■□□□□ 0.04
CHRD-204ENST00000420973 COPS2P61201 443 aa15.32■□□□□ 0.04
CHRD-204ENST00000420973 Q3C1V9 767 aa15.32■□□□□ 0.04
CHRD-204ENST00000420973 CPNE8Q86YQ8 564 aa15.32■□□□□ 0.04
CHRD-204ENST00000420973 PDCD7Q8N8D1 485 aaKnown RBP15.32■□□□□ 0.04
CHRD-204ENST00000420973 SLC35G2Q8TBE7 412 aa15.32■□□□□ 0.04
CHRD-204ENST00000420973 MGARPQ8TDB4 240 aa15.32■□□□□ 0.04
CHRD-204ENST00000420973 DNAJC1Q96KC8 554 aaKnown RBP15.32■□□□□ 0.04
CHRD-204ENST00000420973 SPATC1LQ9H0A9 340 aa15.32■□□□□ 0.04
CHRD-204ENST00000420973 TMEM117Q9H0C3 514 aa15.32■□□□□ 0.04
CHRD-204ENST00000420973 FBXO40Q9UH90 709 aa15.32■□□□□ 0.04
CHRD-204ENST00000420973 SNCAIPQ9Y6H5 919 aa15.32■□□□□ 0.04
CHRD-204ENST00000420973 MYCLP1P12525 358 aaPredicted RBP15.31■□□□□ 0.04
CHRD-204ENST00000420973 CALB2P22676 271 aa15.31■□□□□ 0.04
CHRD-204ENST00000420973 SFNP31947 248 aa15.31■□□□□ 0.04
CHRD-204ENST00000420973 PTDSS1P48651 473 aaKnown RBP15.31■□□□□ 0.04
CHRD-204ENST00000420973 GALK1P51570 392 aa15.31■□□□□ 0.04
CHRD-204ENST00000420973 ADARP55265 1226 aaKnown RBP15.31■□□□□ 0.04
CHRD-204ENST00000420973 TFAMQ00059 246 aaKnown RBP15.31■□□□□ 0.04
CHRD-204ENST00000420973 ORC1Q13415 861 aa15.31■□□□□ 0.04
CHRD-204ENST00000420973 SMUG1Q53HV7 270 aa15.31■□□□□ 0.04
CHRD-204ENST00000420973 MORC4Q8TE76 937 aa15.31■□□□□ 0.04
CHRD-204ENST00000420973 FAM118BQ9BPY3 351 aa15.31■□□□□ 0.04
CHRD-204ENST00000420973 MSTO1Q9BUK6 570 aa15.31■□□□□ 0.04
CHRD-204ENST00000420973 CELF4Q9BZC1 486 aaKnown RBP15.31■□□□□ 0.04
CHRD-204ENST00000420973 RAB17Q9H0T7 212 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms