RNA–Protein interactions for RNA: ENST00000418628.5

PTCD3-204, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 532 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-204ENST00000418628 ZNF280DQ6N043 979 aa20.09■□□□□ 0.81
PTCD3-204ENST00000418628 LLGL2Q6P1M3 1020 aa20.09■□□□□ 0.81
PTCD3-204ENST00000418628 HDAC7Q8WUI4 952 aa20.09■□□□□ 0.81
PTCD3-204ENST00000418628 XYLT2Q9H1B5 865 aa20.09■□□□□ 0.81
PTCD3-204ENST00000418628 S1PR5Q9H228 398 aa20.09■□□□□ 0.81
PTCD3-204ENST00000418628 VRTNQ9H8Y1 702 aa20.09■□□□□ 0.81
PTCD3-204ENST00000418628 FBXL5Q9UKA1 691 aa20.09■□□□□ 0.81
PTCD3-204ENST00000418628 CDY1Q9Y6F8 540 aa20.09■□□□□ 0.81
PTCD3-204ENST00000418628 MYO10Q9HD67 2058 aa20.09■□□□□ 0.81
PTCD3-204ENST00000418628 ANAPC1Q9H1A4 1944 aa20.08■□□□□ 0.81
PTCD3-204ENST00000418628 ARHGEF37A1IGU5 675 aa20.08■□□□□ 0.81
PTCD3-204ENST00000418628 H7C4K7 107 aa20.08■□□□□ 0.81
PTCD3-204ENST00000418628 VNN1O95497 513 aa20.08■□□□□ 0.81
PTCD3-204ENST00000418628 HOXB8P17481 243 aaPredicted RBP20.08■□□□□ 0.81
PTCD3-204ENST00000418628 VAMP7P51809 220 aa20.08■□□□□ 0.81
PTCD3-204ENST00000418628 MRPS5P82675 430 aaKnown RBP20.08■□□□□ 0.81
PTCD3-204ENST00000418628 ROR1Q01973 937 aa20.08■□□□□ 0.81
PTCD3-204ENST00000418628 YWHAHQ04917 246 aaPredicted RBP20.08■□□□□ 0.81
PTCD3-204ENST00000418628 KLHL10Q6JEL2 608 aa20.08■□□□□ 0.81
PTCD3-204ENST00000418628 DSTYKQ6XUX3 929 aa20.08■□□□□ 0.81
PTCD3-204ENST00000418628 SPATA18Q8TC71 538 aa20.08■□□□□ 0.81
PTCD3-204ENST00000418628 EEF2KMTQ96G04 330 aa20.08■□□□□ 0.81
PTCD3-204ENST00000418628 CEP63Q96MT8 703 aa20.08■□□□□ 0.81
PTCD3-204ENST00000418628 RTP3Q9BQQ7 232 aa20.08■□□□□ 0.81
PTCD3-204ENST00000418628 OXCT2Q9BYC2 517 aaPredicted RBP20.08■□□□□ 0.81
PTCD3-204ENST00000418628 CD207Q9UJ71 328 aa20.08■□□□□ 0.81
PTCD3-204ENST00000418628 BDP1A6H8Y1 2624 aa20.07■□□□□ 0.8
PTCD3-204ENST00000418628 CUL9Q8IWT3 2517 aa20.07■□□□□ 0.8
PTCD3-204ENST00000418628 BICDL2A1A5D9 508 aa20.07■□□□□ 0.8
PTCD3-204ENST00000418628 WDR27A2RRH5 827 aa20.07■□□□□ 0.8
PTCD3-204ENST00000418628 ABLIM3O94929 683 aa20.07■□□□□ 0.8
PTCD3-204ENST00000418628 CST3P01034 146 aaPredicted RBP20.07■□□□□ 0.8
PTCD3-204ENST00000418628 OR1D2P34982 312 aa20.07■□□□□ 0.8
PTCD3-204ENST00000418628 KCNQ1P51787 676 aa20.07■□□□□ 0.8
PTCD3-204ENST00000418628 PPP3CAQ08209 521 aa20.07■□□□□ 0.8
PTCD3-204ENST00000418628 SMAD4Q13485 552 aaKnown RBP20.07■□□□□ 0.8
PTCD3-204ENST00000418628 AAK1Q2M2I8 961 aa20.07■□□□□ 0.8
PTCD3-204ENST00000418628 DPCR1Q3MIW9 517 aa20.07■□□□□ 0.8
PTCD3-204ENST00000418628 OVOS1Q6IE37 1185 aa20.07■□□□□ 0.8
PTCD3-204ENST00000418628 USP37Q86T82 979 aa20.07■□□□□ 0.8
PTCD3-204ENST00000418628 MLKLQ8NB16 471 aa20.07■□□□□ 0.8
PTCD3-204ENST00000418628 CMASQ8NFW8 434 aaPredicted RBP20.07■□□□□ 0.8
PTCD3-204ENST00000418628 SUSD6Q92537 303 aa20.07■□□□□ 0.8
PTCD3-204ENST00000418628 ASB2Q96Q27 587 aa20.07■□□□□ 0.8
PTCD3-204ENST00000418628 RHOBTB2Q9BYZ6 727 aa20.07■□□□□ 0.8
PTCD3-204ENST00000418628 MAN1C1Q9NR34 630 aa20.07■□□□□ 0.8
PTCD3-204ENST00000418628 RWDD2AQ9UIY3 292 aa20.07■□□□□ 0.8
PTCD3-204ENST00000418628 DSEQ9UL01 958 aa20.07■□□□□ 0.8
PTCD3-204ENST00000418628 L1RE1Q9UN81 338 aa20.07■□□□□ 0.8
PTCD3-204ENST00000418628 TIMM13Q9Y5L4 95 aaPredicted RBP20.07■□□□□ 0.8
PTCD3-204ENST00000418628 GRXCR2A6NFK2 248 aa20.06■□□□□ 0.8
PTCD3-204ENST00000418628 CYB561D2O14569 222 aa20.06■□□□□ 0.8
PTCD3-204ENST00000418628 MBTPS2O43462 519 aa20.06■□□□□ 0.8
PTCD3-204ENST00000418628 KRT19P08727 400 aa20.06■□□□□ 0.8
PTCD3-204ENST00000418628 TRIM49P0CI25 452 aa20.06■□□□□ 0.8
PTCD3-204ENST00000418628 TRIM49CP0CI26 452 aa20.06■□□□□ 0.8
PTCD3-204ENST00000418628 EPB41P11171 864 aaKnown RBP20.06■□□□□ 0.8
PTCD3-204ENST00000418628 MARSP56192 900 aaKnown RBP20.06■□□□□ 0.8
PTCD3-204ENST00000418628 CTXN3Q4LDR2 81 aa20.06■□□□□ 0.8
PTCD3-204ENST00000418628 SV2AQ7L0J3 742 aa20.06■□□□□ 0.8
PTCD3-204ENST00000418628 GLYCTKQ8IVS8 523 aa20.06■□□□□ 0.8
PTCD3-204ENST00000418628 TOP6BLQ8N6T0 577 aa20.06■□□□□ 0.8
PTCD3-204ENST00000418628 HPDLQ96IR7 371 aa20.06■□□□□ 0.8
PTCD3-204ENST00000418628 PLEKHA4Q9H4M7 779 aa20.06■□□□□ 0.8
PTCD3-204ENST00000418628 SFXN1Q9H9B4 322 aa20.06■□□□□ 0.8
PTCD3-204ENST00000418628 A0A0C4DFX4 3053 aa20.05■□□□□ 0.8
PTCD3-204ENST00000418628 VNN2O95498 520 aa20.05■□□□□ 0.8
PTCD3-204ENST00000418628 BMP1P13497 986 aa20.05■□□□□ 0.8
PTCD3-204ENST00000418628 KRT13P13646 458 aa20.05■□□□□ 0.8
PTCD3-204ENST00000418628 ATICP31939 592 aa20.05■□□□□ 0.8
PTCD3-204ENST00000418628 GTF2H1P32780 548 aa20.05■□□□□ 0.8
PTCD3-204ENST00000418628 NLRP12P59046 1061 aa20.05■□□□□ 0.8
PTCD3-204ENST00000418628 MYO1EQ12965 1108 aa20.05■□□□□ 0.8
PTCD3-204ENST00000418628 PUS10Q3MIT2 529 aaKnown RBP20.05■□□□□ 0.8
PTCD3-204ENST00000418628 WSCD1Q658N2 575 aa20.05■□□□□ 0.8
PTCD3-204ENST00000418628 FILIP1Q7Z7B0 1213 aa20.05■□□□□ 0.8
PTCD3-204ENST00000418628 PALB2Q86YC2 1186 aa20.05■□□□□ 0.8
PTCD3-204ENST00000418628 TMEM86AQ8N2M4 240 aa20.05■□□□□ 0.8
PTCD3-204ENST00000418628 PDCL2Q8N4E4 241 aa20.05■□□□□ 0.8
PTCD3-204ENST00000418628 OR10T2Q8NGX3 314 aa20.05■□□□□ 0.8
PTCD3-204ENST00000418628 FEZF2Q8TBJ5 459 aa20.05■□□□□ 0.8
PTCD3-204ENST00000418628 SLC35C1Q96A29 364 aa20.05■□□□□ 0.8
PTCD3-204ENST00000418628 TMEM63CQ9P1W3 806 aa20.05■□□□□ 0.8
PTCD3-204ENST00000418628 NUP210Q8TEM1 1887 aaPredicted RBP20.05■□□□□ 0.8
PTCD3-204ENST00000418628 OR6C75A6NL08 312 aa20.04■□□□□ 0.8
PTCD3-204ENST00000418628 GABRDO14764 452 aa20.04■□□□□ 0.8
PTCD3-204ENST00000418628 STX17P56962 302 aa20.04■□□□□ 0.8
PTCD3-204ENST00000418628 MYL6P60660 151 aa20.04■□□□□ 0.8
PTCD3-204ENST00000418628 SMAD2Q15796 467 aaKnown RBP20.04■□□□□ 0.8
PTCD3-204ENST00000418628 SOWAHAQ2M3V2 549 aa20.04■□□□□ 0.8
PTCD3-204ENST00000418628 CCDC183Q5T5S1 534 aa20.04■□□□□ 0.8
PTCD3-204ENST00000418628 TPGS2Q68CL5 300 aa20.04■□□□□ 0.8
PTCD3-204ENST00000418628 EP400NLQ6ZTU2 488 aa20.04■□□□□ 0.8
PTCD3-204ENST00000418628 DPH6Q7L8W6 267 aa20.04■□□□□ 0.8
PTCD3-204ENST00000418628 FRMD5Q7Z6J6 570 aa20.04■□□□□ 0.8
PTCD3-204ENST00000418628 KREMEN2Q8NCW0 462 aa20.04■□□□□ 0.8
PTCD3-204ENST00000418628 ZNF461Q8TAF7 563 aa20.04■□□□□ 0.8
PTCD3-204ENST00000418628 KBTBD7Q8WVZ9 684 aa20.04■□□□□ 0.8
PTCD3-204ENST00000418628 TMEM8AQ9HCN3 771 aa20.04■□□□□ 0.8
PTCD3-204ENST00000418628 SNX9Q9Y5X1 595 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms