RNA–Protein interactions for RNA: ENST00000418336.6

PKNOX1-202, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 2

Gene PKNOX1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-202ENST00000418336 ITGB3P05106 788 aa22.26■■□□□ 1.15
PKNOX1-202ENST00000418336 POLR2BP30876 1174 aaKnown RBP22.26■■□□□ 1.15
PKNOX1-202ENST00000418336 ARPP19P56211 112 aa22.26■■□□□ 1.15
PKNOX1-202ENST00000418336 CYP24A1Q07973 514 aa22.26■■□□□ 1.15
PKNOX1-202ENST00000418336 SNRNP35Q16560 246 aaKnown RBP22.26■■□□□ 1.15
PKNOX1-202ENST00000418336 OVOS1Q6IE37 1185 aa22.26■■□□□ 1.15
PKNOX1-202ENST00000418336 OTOP3Q7RTS5 596 aa22.26■■□□□ 1.15
PKNOX1-202ENST00000418336 PLCD3Q8N3E9 789 aa22.26■■□□□ 1.15
PKNOX1-202ENST00000418336 MFSD14AQ96MC6 490 aa22.26■■□□□ 1.15
PKNOX1-202ENST00000418336 OXCT2Q9BYC2 517 aaPredicted RBP22.26■■□□□ 1.15
PKNOX1-202ENST00000418336 KIAA1586Q9HCI6 787 aa22.26■■□□□ 1.15
PKNOX1-202ENST00000418336 EXOC1Q9NV70 894 aa22.26■■□□□ 1.15
PKNOX1-202ENST00000418336 ITGA11Q9UKX5 1188 aa22.26■■□□□ 1.15
PKNOX1-202ENST00000418336 OR6C75A6NL08 312 aa22.25■■□□□ 1.15
PKNOX1-202ENST00000418336 PRR33A8MZF0 331 aa22.25■■□□□ 1.15
PKNOX1-202ENST00000418336 KPNA7A9QM74 516 aa22.25■■□□□ 1.15
PKNOX1-202ENST00000418336 ODC1P11926 461 aa22.25■■□□□ 1.15
PKNOX1-202ENST00000418336 ADCY1Q08828 1119 aa22.25■■□□□ 1.15
PKNOX1-202ENST00000418336 GPR17Q13304 367 aa22.25■■□□□ 1.15
PKNOX1-202ENST00000418336 MYBPC2Q14324 1141 aa22.25■■□□□ 1.15
PKNOX1-202ENST00000418336 PSMD6Q15008 389 aa22.25■■□□□ 1.15
PKNOX1-202ENST00000418336 SLC5A9Q2M3M2 681 aa22.25■■□□□ 1.15
PKNOX1-202ENST00000418336 TRIM67Q6ZTA4 783 aa22.25■■□□□ 1.15
PKNOX1-202ENST00000418336 LRRC52Q8N7C0 313 aa22.25■■□□□ 1.15
PKNOX1-202ENST00000418336 XXYLT1Q8NBI6 393 aa22.25■■□□□ 1.15
PKNOX1-202ENST00000418336 ZNF516Q92618 1163 aa22.25■■□□□ 1.15
PKNOX1-202ENST00000418336 AVENQ9NQS1 362 aaPredicted RBP22.25■■□□□ 1.15
PKNOX1-202ENST00000418336 CGNQ9P2M7 1197 aaKnown RBP22.25■■□□□ 1.15
PKNOX1-202ENST00000418336 MAFFQ9ULX9 164 aa22.25■■□□□ 1.15
PKNOX1-202ENST00000418336 AGAP1Q9UPQ3 857 aa22.25■■□□□ 1.15
PKNOX1-202ENST00000418336 INSL5Q9Y5Q6 135 aa22.25■■□□□ 1.15
PKNOX1-202ENST00000418336 CYB561D2O14569 222 aa22.24■■□□□ 1.15
PKNOX1-202ENST00000418336 CYP2J2P51589 502 aa22.24■■□□□ 1.15
PKNOX1-202ENST00000418336 WSCD1Q658N2 575 aa22.24■■□□□ 1.15
PKNOX1-202ENST00000418336 LRRTM3Q86VH5 581 aa22.24■■□□□ 1.15
PKNOX1-202ENST00000418336 WDR49Q8IV35 697 aa22.24■■□□□ 1.15
PKNOX1-202ENST00000418336 SLC9A9Q8IVB4 645 aa22.24■■□□□ 1.15
PKNOX1-202ENST00000418336 RDH13Q8NBN7 331 aa22.24■■□□□ 1.15
PKNOX1-202ENST00000418336 ITFG1Q8TB96 612 aa22.24■■□□□ 1.15
PKNOX1-202ENST00000418336 PIDD1Q9HB75 910 aa22.24■■□□□ 1.15
PKNOX1-202ENST00000418336 GDAP2Q9NXN4 497 aa22.24■■□□□ 1.15
PKNOX1-202ENST00000418336 CEP72Q9P209 647 aa22.24■■□□□ 1.15
PKNOX1-202ENST00000418336 L1RE1Q9UN81 338 aa22.24■■□□□ 1.15
PKNOX1-202ENST00000418336 ZNF318Q5VUA4 2279 aa22.23■■□□□ 1.15
PKNOX1-202ENST00000418336 MTMR11A4FU01 709 aa22.23■■□□□ 1.15
PKNOX1-202ENST00000418336 ANHXE9PGG2 379 aa22.23■■□□□ 1.15
PKNOX1-202ENST00000418336 KCNB1Q14721 858 aa22.23■■□□□ 1.15
PKNOX1-202ENST00000418336 PRSS36Q5K4E3 855 aa22.23■■□□□ 1.15
PKNOX1-202ENST00000418336 HFE2Q6ZVN8 426 aa22.23■■□□□ 1.15
PKNOX1-202ENST00000418336 CSGALNACT2Q8N6G5 542 aa22.23■■□□□ 1.15
PKNOX1-202ENST00000418336 TTC9BQ8N6N2 239 aa22.23■■□□□ 1.15
PKNOX1-202ENST00000418336 SPATA20Q8TB22 786 aa22.23■■□□□ 1.15
PKNOX1-202ENST00000418336 CACTINQ8WUQ7 758 aaKnown RBP22.23■■□□□ 1.15
PKNOX1-202ENST00000418336 ACSF2Q96CM8 615 aaPredicted RBP22.23■■□□□ 1.15
PKNOX1-202ENST00000418336 ZCWPW1Q9H0M4 648 aa22.23■■□□□ 1.15
PKNOX1-202ENST00000418336 DNAJC25Q9H1X3 360 aa22.23■■□□□ 1.15
PKNOX1-202ENST00000418336 KCNK12Q9HB15 430 aa22.23■■□□□ 1.15
PKNOX1-202ENST00000418336 CYP4F11Q9HBI6 524 aa22.23■■□□□ 1.15
PKNOX1-202ENST00000418336 RAPGEFL1Q9UHV5 662 aa22.23■■□□□ 1.15
PKNOX1-202ENST00000418336 SORCS3Q9UPU3 1222 aa22.23■■□□□ 1.15
PKNOX1-202ENST00000418336 PDXKO00764 312 aa22.22■■□□□ 1.15
PKNOX1-202ENST00000418336 XYLBO75191 536 aa22.22■■□□□ 1.15
PKNOX1-202ENST00000418336 LAMP2P13473 410 aa22.22■■□□□ 1.15
PKNOX1-202ENST00000418336 PNPLA4P41247 253 aa22.22■■□□□ 1.15
PKNOX1-202ENST00000418336 CCR2P41597 374 aa22.22■■□□□ 1.15
PKNOX1-202ENST00000418336 CLDN10P78369 228 aa22.22■■□□□ 1.15
PKNOX1-202ENST00000418336 SIGLEC14Q08ET2 396 aa22.22■■□□□ 1.15
PKNOX1-202ENST00000418336 SV2CQ496J9 727 aa22.22■■□□□ 1.15
PKNOX1-202ENST00000418336 CENPPQ6IPU0 288 aa22.22■■□□□ 1.15
PKNOX1-202ENST00000418336 HS2ST1Q7LGA3 356 aa22.22■■□□□ 1.15
PKNOX1-202ENST00000418336 PDCL2Q8N4E4 241 aa22.22■■□□□ 1.15
PKNOX1-202ENST00000418336 NOC3LQ8WTT2 800 aaKnown RBP22.22■■□□□ 1.15
PKNOX1-202ENST00000418336 RSAD2Q8WXG1 361 aa22.22■■□□□ 1.15
PKNOX1-202ENST00000418336 ZNF560Q96MR9 790 aa22.22■■□□□ 1.15
PKNOX1-202ENST00000418336 PGLYRP2Q96PD5 576 aa22.22■■□□□ 1.15
PKNOX1-202ENST00000418336 PKMYT1Q99640 499 aa22.22■■□□□ 1.15
PKNOX1-202ENST00000418336 CGRRF1Q99675 332 aa22.22■■□□□ 1.15
PKNOX1-202ENST00000418336 LRRC3Q9BY71 257 aa22.22■■□□□ 1.15
PKNOX1-202ENST00000418336 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP22.22■■□□□ 1.155e-12■■■■□ 22.7
PKNOX1-202ENST00000418336 CIZ1Q9ULV3 898 aaPredicted RBP22.22■■□□□ 1.15
PKNOX1-202ENST00000418336 TRAF3IP3Q9Y228 551 aa22.22■■□□□ 1.15
PKNOX1-202ENST00000418336 YIPF1Q9Y548 306 aa22.22■■□□□ 1.15
PKNOX1-202ENST00000418336 MOSPD3O75425 235 aa22.21■■□□□ 1.15
PKNOX1-202ENST00000418336 CST3P01034 146 aaPredicted RBP22.21■■□□□ 1.15
PKNOX1-202ENST00000418336 RHOP08100 348 aa22.21■■□□□ 1.15
PKNOX1-202ENST00000418336 CPB1P15086 417 aa22.21■■□□□ 1.15
PKNOX1-202ENST00000418336 FSHRP23945 695 aa22.21■■□□□ 1.15
PKNOX1-202ENST00000418336 MCCD1P59942 119 aaPredicted RBP22.21■■□□□ 1.15
PKNOX1-202ENST00000418336 PNOCQ13519 176 aa22.21■■□□□ 1.15
PKNOX1-202ENST00000418336 HTR4Q13639 388 aa22.21■■□□□ 1.15
PKNOX1-202ENST00000418336 SURF1Q15526 300 aa22.21■■□□□ 1.15
PKNOX1-202ENST00000418336 ZCWPW2Q504Y3 356 aa22.21■■□□□ 1.15
PKNOX1-202ENST00000418336 GET4Q7L5D6 327 aaPredicted RBP22.21■■□□□ 1.15
PKNOX1-202ENST00000418336 TRAPPC11Q7Z392 1133 aa22.21■■□□□ 1.15
PKNOX1-202ENST00000418336 BMP8AQ7Z5Y6 402 aa22.21■■□□□ 1.15
PKNOX1-202ENST00000418336 USP37Q86T82 979 aa22.21■■□□□ 1.15
PKNOX1-202ENST00000418336 OSTM1Q86WC4 334 aa22.21■■□□□ 1.15
PKNOX1-202ENST00000418336 DSEQ9UL01 958 aa22.21■■□□□ 1.15
PKNOX1-202ENST00000418336 TMEM221A6NGB7 291 aa22.2■■□□□ 1.14
PKNOX1-202ENST00000418336 M0R296 226 aa22.2■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms