RNA–Protein interactions for RNA: ENST00000415950.4

SCN1B-202, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SCN1B, Length 4,537 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-202ENST00000415950 ARL13BQ3SXY8 428 aa13.54□□□□□ -0.24
SCN1B-202ENST00000415950 PID1Q7Z2X4 250 aa13.54□□□□□ -0.24
SCN1B-202ENST00000415950 METTL23Q86XA0 190 aa13.54□□□□□ -0.24
SCN1B-202ENST00000415950 MCPH1Q8NEM0 835 aa13.54□□□□□ -0.24
SCN1B-202ENST00000415950 DCAF4Q8WV16 495 aa13.54□□□□□ -0.24
SCN1B-202ENST00000415950 INPP5DQ92835 1189 aa13.54□□□□□ -0.24
SCN1B-202ENST00000415950 SLC12A6Q9UHW9 1150 aa13.54□□□□□ -0.24
SCN1B-202ENST00000415950 PRR12Q9ULL5 1215 aa13.54□□□□□ -0.24
SCN1B-202ENST00000415950 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.54□□□□□ -0.24
SCN1B-202ENST00000415950 ARHGAP10A1A4S6 786 aa13.53□□□□□ -0.24
SCN1B-202ENST00000415950 CSDE1O75534 798 aaKnown RBP13.53□□□□□ -0.24
SCN1B-202ENST00000415950 DGKIO75912 1065 aa13.53□□□□□ -0.24
SCN1B-202ENST00000415950 CYP4A22Q5TCH4 519 aa13.53□□□□□ -0.24
SCN1B-202ENST00000415950 MROH9Q5TGP6 573 aa13.53□□□□□ -0.24
SCN1B-202ENST00000415950 ARHGAP27Q6ZUM4 889 aa13.53□□□□□ -0.24
SCN1B-202ENST00000415950 BZW1Q7L1Q6 419 aaKnown RBP13.53□□□□□ -0.24
SCN1B-202ENST00000415950 EXOC8Q8IYI6 725 aa13.53□□□□□ -0.24
SCN1B-202ENST00000415950 VGLL2Q8N8G2 317 aa13.53□□□□□ -0.24
SCN1B-202ENST00000415950 SLC35C1Q96A29 364 aa13.53□□□□□ -0.24
SCN1B-202ENST00000415950 WWP1Q9H0M0 922 aa13.53□□□□□ -0.24
SCN1B-202ENST00000415950 SLC5A4Q9NY91 659 aa13.53□□□□□ -0.24
SCN1B-202ENST00000415950 ZFATQ9P243 1243 aa13.53□□□□□ -0.24
SCN1B-202ENST00000415950 RPS6KA5O75582 802 aa13.53□□□□□ -0.24
SCN1B-202ENST00000415950 HADHAP40939 763 aa13.53□□□□□ -0.24
SCN1B-202ENST00000415950 PTENP60484 403 aa13.53□□□□□ -0.24
SCN1B-202ENST00000415950 DYNC1I2Q13409 638 aaKnown RBP13.53□□□□□ -0.24
SCN1B-202ENST00000415950 TATDN2Q93075 761 aa13.53□□□□□ -0.24
SCN1B-202ENST00000415950 KDM4CQ9H3R0 1056 aa13.53□□□□□ -0.24
SCN1B-202ENST00000415950 AIPL1Q9NZN9 384 aa13.53□□□□□ -0.24
SCN1B-202ENST00000415950 ARMCX1Q9P291 453 aa13.53□□□□□ -0.24
SCN1B-202ENST00000415950 JCADQ9P266 1359 aa13.53□□□□□ -0.24
SCN1B-202ENST00000415950 LDHAP00338 332 aaKnown RBP13.53□□□□□ -0.24
SCN1B-202ENST00000415950 IRX1P78414 480 aaPredicted RBP13.53□□□□□ -0.24
SCN1B-202ENST00000415950 ORC2Q13416 577 aaPredicted RBP13.53□□□□□ -0.24
SCN1B-202ENST00000415950 EPHA7Q15375 998 aa13.53□□□□□ -0.24
SCN1B-202ENST00000415950 OLFML2BQ68BL8 750 aa13.53□□□□□ -0.24
SCN1B-202ENST00000415950 SCN4BQ8IWT1 228 aa13.53□□□□□ -0.24
SCN1B-202ENST00000415950 TMEM121Q9BTD3 319 aa13.53□□□□□ -0.24
SCN1B-202ENST00000415950 SFMBT1Q9UHJ3 866 aa13.53□□□□□ -0.24
SCN1B-202ENST00000415950 AGO2Q9UKV8 859 aaKnown RBP13.53□□□□□ -0.24
SCN1B-202ENST00000415950 RIPK2O43353 540 aa13.52□□□□□ -0.24
SCN1B-202ENST00000415950 MOCS2O96007 188 aaPredicted RBP13.52□□□□□ -0.24
SCN1B-202ENST00000415950 KRT7P08729 469 aa13.52□□□□□ -0.24
SCN1B-202ENST00000415950 MMP10P09238 476 aa13.52□□□□□ -0.24
SCN1B-202ENST00000415950 RBP3P10745 1247 aa13.52□□□□□ -0.24
SCN1B-202ENST00000415950 GCLCP48506 637 aaPredicted RBP13.52□□□□□ -0.24
SCN1B-202ENST00000415950 RGS7P49802 495 aa13.52□□□□□ -0.24
SCN1B-202ENST00000415950 ROR1Q01973 937 aa13.52□□□□□ -0.24
SCN1B-202ENST00000415950 NME3Q13232 169 aa13.52□□□□□ -0.24
SCN1B-202ENST00000415950 WDR72Q3MJ13 1102 aa13.52□□□□□ -0.24
SCN1B-202ENST00000415950 TBC1D16Q8TBP0 767 aa13.52□□□□□ -0.24
SCN1B-202ENST00000415950 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.52□□□□□ -0.24
SCN1B-202ENST00000415950 TMA16Q96EY4 203 aaKnown RBP13.52□□□□□ -0.24
SCN1B-202ENST00000415950 SLCO1B3Q9NPD5 702 aa13.52□□□□□ -0.24
SCN1B-202ENST00000415950 DDX28Q9NUL7 540 aaKnown RBP13.52□□□□□ -0.24
SCN1B-202ENST00000415950 UVRAGQ9P2Y5 699 aa13.52□□□□□ -0.24
SCN1B-202ENST00000415950 STRIP2Q9ULQ0 834 aa13.52□□□□□ -0.24
SCN1B-202ENST00000415950 ARHGAP26Q9UNA1 814 aa13.52□□□□□ -0.24
SCN1B-202ENST00000415950 C15orf41Q9Y2V0 281 aa13.52□□□□□ -0.24
SCN1B-202ENST00000415950 EME2A4GXA9 379 aaPredicted RBP13.52□□□□□ -0.24
SCN1B-202ENST00000415950 DNM1LO00429 736 aa13.52□□□□□ -0.24
SCN1B-202ENST00000415950 MAN1A2O60476 641 aa13.52□□□□□ -0.24
SCN1B-202ENST00000415950 SMARCA1P28370 1054 aa13.52□□□□□ -0.24
SCN1B-202ENST00000415950 KIAA1841Q6NSI8 718 aa13.52□□□□□ -0.24
SCN1B-202ENST00000415950 CDC42EP5Q6NZY7 148 aa13.52□□□□□ -0.24
SCN1B-202ENST00000415950 LRRC55Q6ZSA7 311 aa13.52□□□□□ -0.24
SCN1B-202ENST00000415950 FAM71DQ8N9W8 422 aa13.52□□□□□ -0.24
SCN1B-202ENST00000415950 TAS1R2Q8TE23 839 aa13.52□□□□□ -0.24
SCN1B-202ENST00000415950 MIEF2Q96C03 454 aa13.52□□□□□ -0.24
SCN1B-202ENST00000415950 INPP4AQ96PE3 977 aaPredicted RBP13.52□□□□□ -0.24
SCN1B-202ENST00000415950 ZBTB18Q99592 522 aa13.52□□□□□ -0.24
SCN1B-202ENST00000415950 ROPN1BQ9BZX4 212 aaPredicted RBP13.52□□□□□ -0.24
SCN1B-202ENST00000415950 ROPN1Q9HAT0 212 aaPredicted RBP13.52□□□□□ -0.24
SCN1B-202ENST00000415950 ATP6V0A4Q9HBG4 840 aa13.52□□□□□ -0.24
SCN1B-202ENST00000415950 CHST7Q9NS84 486 aa13.52□□□□□ -0.24
SCN1B-202ENST00000415950 IP6K2Q9UHH9 426 aa13.52□□□□□ -0.24
SCN1B-202ENST00000415950 POLRMTO00411 1230 aaKnown RBP13.52□□□□□ -0.25
SCN1B-202ENST00000415950 TLR2O60603 784 aa13.52□□□□□ -0.25
SCN1B-202ENST00000415950 CBWD6Q4V339 395 aa13.52□□□□□ -0.25
SCN1B-202ENST00000415950 CBWD3Q5JTY5 395 aa13.52□□□□□ -0.25
SCN1B-202ENST00000415950 CBWD5Q5RIA9 395 aa13.52□□□□□ -0.25
SCN1B-202ENST00000415950 RARS2Q5T160 578 aaKnown RBP13.52□□□□□ -0.25
SCN1B-202ENST00000415950 APTXQ7Z2E3 356 aaKnown RBP13.52□□□□□ -0.25
SCN1B-202ENST00000415950 FAM160B2Q86V87 743 aa13.52□□□□□ -0.25
SCN1B-202ENST00000415950 DDIASQ8IXT1 998 aa13.52□□□□□ -0.25
SCN1B-202ENST00000415950 NEUROG2Q9H2A3 272 aa13.52□□□□□ -0.25
SCN1B-202ENST00000415950 FAM8A1Q9UBU6 413 aa13.52□□□□□ -0.25
SCN1B-202ENST00000415950 AIM2O14862 343 aa13.52□□□□□ -0.25
SCN1B-202ENST00000415950 SLC16A3O15427 465 aaKnown RBP13.52□□□□□ -0.25
SCN1B-202ENST00000415950 C21orf2O43822 256 aa13.52□□□□□ -0.25
SCN1B-202ENST00000415950 GGPS1O95749 300 aa13.52□□□□□ -0.25
SCN1B-202ENST00000415950 ZSCAN5DPP0CG00 497 aa13.52□□□□□ -0.25
SCN1B-202ENST00000415950 PAPOLAP51003 745 aaKnown RBP13.52□□□□□ -0.25
SCN1B-202ENST00000415950 PTK7Q13308 1070 aa13.52□□□□□ -0.25
SCN1B-202ENST00000415950 SURF1Q15526 300 aa13.52□□□□□ -0.25
SCN1B-202ENST00000415950 CYP26B1Q9NR63 512 aa13.52□□□□□ -0.25
SCN1B-202ENST00000415950 RHBDL2Q9NX52 303 aa13.52□□□□□ -0.25
SCN1B-202ENST00000415950 XPO7Q9UIA9 1087 aaKnown RBP13.52□□□□□ -0.25
SCN1B-202ENST00000415950 NR2E1Q9Y466 385 aa13.52□□□□□ -0.25
SCN1B-202ENST00000415950 PCDHGC5Q9Y5F6 944 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms