RNA–Protein interactions for RNA: ENST00000410828.1

RNU4-53P-201, Transcript of RNA, U4 small nuclear 53, pseudogene, humanhuman

BASIC

Gene RNU4-53P, Length 140 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-53P-201ENST00000410828 SPEGQ15772 3267 aa2.6□□□□□ -1.99
RNU4-53P-201ENST00000410828 COL6A6A6NMZ7 2263 aa2.59□□□□□ -1.99
RNU4-53P-201ENST00000410828 AHCTF1Q8WYP5 2266 aa2.59□□□□□ -1.99
RNU4-53P-201ENST00000410828 OR6C75A6NL08 312 aa2.59□□□□□ -1.99
RNU4-53P-201ENST00000410828 TTLL13PA6NNM8 815 aa2.59□□□□□ -1.99
RNU4-53P-201ENST00000410828 PATE3B3GLJ2 98 aa2.59□□□□□ -1.99
RNU4-53P-201ENST00000410828 K7ERI5 159 aa2.59□□□□□ -1.99
RNU4-53P-201ENST00000410828 M0R2N6 131 aa2.59□□□□□ -1.99
RNU4-53P-201ENST00000410828 TK2O00142 265 aa2.59□□□□□ -1.99
RNU4-53P-201ENST00000410828 TNFRSF10BO14763 440 aa2.59□□□□□ -1.99
RNU4-53P-201ENST00000410828 CPLX1O14810 134 aa2.59□□□□□ -1.99
RNU4-53P-201ENST00000410828 MAP3K13O43283 966 aa2.59□□□□□ -1.99
RNU4-53P-201ENST00000410828 SLC37A4O43826 429 aa2.59□□□□□ -1.99
RNU4-53P-201ENST00000410828 CCNT1O60563 726 aaKnown RBP2.59□□□□□ -1.99
RNU4-53P-201ENST00000410828 USO1O60763 962 aaKnown RBP2.59□□□□□ -1.99
RNU4-53P-201ENST00000410828 OPHN1O60890 802 aa2.59□□□□□ -1.99
RNU4-53P-201ENST00000410828 ALDH1A2O94788 518 aa2.59□□□□□ -1.99
RNU4-53P-201ENST00000410828 SLITRK3O94933 977 aa2.59□□□□□ -1.99
RNU4-53P-201ENST00000410828 OAZ2O95190 189 aa2.59□□□□□ -1.99
RNU4-53P-201ENST00000410828 PRAMEF12O95522 483 aa2.59□□□□□ -1.99
RNU4-53P-201ENST00000410828 EGFP01133 1207 aa2.59□□□□□ -1.99
RNU4-53P-201ENST00000410828 CAPNS1P04632 268 aa2.59□□□□□ -1.99
RNU4-53P-201ENST00000410828 CFIP05156 583 aa2.59□□□□□ -1.99
RNU4-53P-201ENST00000410828 XRCC6P12956 609 aaKnown RBP eCLIP2.59□□□□□ -1.99
RNU4-53P-201ENST00000410828 KCNE1P15382 129 aa2.59□□□□□ -1.99
RNU4-53P-201ENST00000410828 ENGP17813 658 aa2.59□□□□□ -1.99
RNU4-53P-201ENST00000410828 LIG1P18858 919 aa2.59□□□□□ -1.99
RNU4-53P-201ENST00000410828 ATP2B1P20020 1258 aa2.59□□□□□ -1.99
RNU4-53P-201ENST00000410828 IGFBP6P24592 240 aaPredicted RBP2.59□□□□□ -1.99
RNU4-53P-201ENST00000410828 GABRR2P28476 465 aa2.59□□□□□ -1.99
RNU4-53P-201ENST00000410828 CDC25CP30307 473 aa2.59□□□□□ -1.99
RNU4-53P-201ENST00000410828 HOXD12P35452 270 aa2.59□□□□□ -1.99
RNU4-53P-201ENST00000410828 AVPR1AP37288 418 aa2.59□□□□□ -1.99
RNU4-53P-201ENST00000410828 GRM5P41594 1212 aa2.59□□□□□ -1.99
RNU4-53P-201ENST00000410828 NAMPTP43490 491 aa2.59□□□□□ -1.99
RNU4-53P-201ENST00000410828 MAPK8P45983 427 aa2.59□□□□□ -1.99
RNU4-53P-201ENST00000410828 RARRES1P49788 294 aa2.59□□□□□ -1.99
RNU4-53P-201ENST00000410828 GALK1P51570 392 aa2.59□□□□□ -1.99
RNU4-53P-201ENST00000410828 EFNA5P52803 228 aa2.59□□□□□ -1.99
RNU4-53P-201ENST00000410828 YWHAHQ04917 246 aaPredicted RBP2.59□□□□□ -1.99
RNU4-53P-201ENST00000410828 GFPT1Q06210 699 aaPredicted RBP2.59□□□□□ -1.99
RNU4-53P-201ENST00000410828 SOX4Q06945 474 aaPredicted RBP2.59□□□□□ -1.99
RNU4-53P-201ENST00000410828 SSRP1Q08945 709 aaKnown RBP2.59□□□□□ -1.99
RNU4-53P-201ENST00000410828 BFSP1Q12934 665 aa2.59□□□□□ -1.99
RNU4-53P-201ENST00000410828 DUSP4Q13115 394 aa2.59□□□□□ -1.99
RNU4-53P-201ENST00000410828 PSMD2Q13200 908 aa2.59□□□□□ -1.99
RNU4-53P-201ENST00000410828 SEMA3BQ13214 749 aa2.59□□□□□ -1.99
RNU4-53P-201ENST00000410828 GPR17Q13304 367 aa2.59□□□□□ -1.99
RNU4-53P-201ENST00000410828 BYSLQ13895 437 aaKnown RBP2.59□□□□□ -1.99
RNU4-53P-201ENST00000410828 VEPH1Q14D04 833 aa2.59□□□□□ -1.99
RNU4-53P-201ENST00000410828 PPP2R5AQ15172 486 aa2.59□□□□□ -1.99
RNU4-53P-201ENST00000410828 TRIP6Q15654 476 aaKnown RBP2.59□□□□□ -1.99
RNU4-53P-201ENST00000410828 NTRK3Q16288 839 aa2.59□□□□□ -1.99
RNU4-53P-201ENST00000410828 TAF12Q16514 161 aa2.59□□□□□ -1.99
RNU4-53P-201ENST00000410828 DUOXA1Q1HG43 343 aa2.59□□□□□ -1.99
RNU4-53P-201ENST00000410828 ADCK5Q3MIX3 580 aa2.59□□□□□ -1.99
RNU4-53P-201ENST00000410828 XKR4Q5GH76 650 aa2.59□□□□□ -1.99
RNU4-53P-201ENST00000410828 STXBP5Q5T5C0 1151 aa2.59□□□□□ -1.99
RNU4-53P-201ENST00000410828 EEF1DP3Q658K8 133 aa2.59□□□□□ -1.99
RNU4-53P-201ENST00000410828 DIEXFQ68CQ4 756 aaKnown RBP2.59□□□□□ -1.99
RNU4-53P-201ENST00000410828 LMBRD2Q68DH5 695 aaPredicted RBP2.59□□□□□ -1.99
RNU4-53P-201ENST00000410828 CDCA2Q69YH5 1023 aaPredicted RBP2.59□□□□□ -1.99
RNU4-53P-201ENST00000410828 CENPPQ6IPU0 288 aa2.59□□□□□ -1.99
RNU4-53P-201ENST00000410828 ANO7Q6IWH7 933 aa2.59□□□□□ -1.99
RNU4-53P-201ENST00000410828 SLC23A3Q6PIS1 610 aa2.59□□□□□ -1.99
RNU4-53P-201ENST00000410828 Q6ZUG5 572 aa2.59□□□□□ -1.99
RNU4-53P-201ENST00000410828 GAREM2Q75VX8 874 aa2.59□□□□□ -1.99
RNU4-53P-201ENST00000410828 LPCAT2Q7L5N7 544 aa2.59□□□□□ -1.99
RNU4-53P-201ENST00000410828 MAEAQ7L5Y9 396 aa2.59□□□□□ -1.99
RNU4-53P-201ENST00000410828 RABEPKQ7Z6M1 372 aa2.59□□□□□ -1.99
RNU4-53P-201ENST00000410828 RAB44Q7Z6P3 723 aaPredicted RBP2.59□□□□□ -1.99
RNU4-53P-201ENST00000410828 DNAJB7Q7Z6W7 309 aaPredicted RBP2.59□□□□□ -1.99
RNU4-53P-201ENST00000410828 PIP4P1Q86T03 277 aa2.59□□□□□ -1.99
RNU4-53P-201ENST00000410828 USP37Q86T82 979 aa2.59□□□□□ -1.99
RNU4-53P-201ENST00000410828 ITIH5Q86UX2 942 aa2.59□□□□□ -1.99
RNU4-53P-201ENST00000410828 RASSF3Q86WH2 238 aa2.59□□□□□ -1.99
RNU4-53P-201ENST00000410828 TMC8Q8IU68 726 aa2.59□□□□□ -1.99
RNU4-53P-201ENST00000410828 SYT12Q8IV01 421 aa2.59□□□□□ -1.99
RNU4-53P-201ENST00000410828 SLFN12Q8IYM2 578 aa2.59□□□□□ -1.99
RNU4-53P-201ENST00000410828 CMTM8Q8IZV2 173 aa2.59□□□□□ -1.99
RNU4-53P-201ENST00000410828 DAGLBQ8NCG7 672 aa2.59□□□□□ -1.99
RNU4-53P-201ENST00000410828 BEST2Q8NFU1 509 aa2.59□□□□□ -1.99
RNU4-53P-201ENST00000410828 RPLP0P6Q8NHW5 317 aa2.59□□□□□ -1.99
RNU4-53P-201ENST00000410828 CEP76Q8TAP6 659 aa2.59□□□□□ -1.99
RNU4-53P-201ENST00000410828 DEPTORQ8TB45 409 aa2.59□□□□□ -1.99
RNU4-53P-201ENST00000410828 ADAM32Q8TC27 787 aa2.59□□□□□ -1.99
RNU4-53P-201ENST00000410828 ADAMTS14Q8WXS8 1223 aa2.59□□□□□ -1.99
RNU4-53P-201ENST00000410828 DDX12PQ92771 950 aa2.59□□□□□ -1.99
RNU4-53P-201ENST00000410828 HAS1Q92839 578 aa2.59□□□□□ -1.99
RNU4-53P-201ENST00000410828 BRF1Q92994 677 aa2.59□□□□□ -1.99
RNU4-53P-201ENST00000410828 PSMG2Q969U7 264 aa2.59□□□□□ -1.99
RNU4-53P-201ENST00000410828 LRIG1Q96JA1 1093 aa2.59□□□□□ -1.99
RNU4-53P-201ENST00000410828 SPACA7Q96KW9 195 aa2.59□□□□□ -1.99
RNU4-53P-201ENST00000410828 SUSD3Q96L08 255 aa2.59□□□□□ -1.99
RNU4-53P-201ENST00000410828 CNOT6LQ96LI5 555 aaKnown RBP2.59□□□□□ -1.99
RNU4-53P-201ENST00000410828 TBC1D32Q96NH3 1257 aa2.59□□□□□ -1.99
RNU4-53P-201ENST00000410828 ACAP3Q96P50 834 aa2.59□□□□□ -1.99
RNU4-53P-201ENST00000410828 LRRC3BQ96PB8 259 aa2.59□□□□□ -1.99
RNU4-53P-201ENST00000410828 BBC3Q96PG8 261 aaPredicted RBP2.59□□□□□ -1.99
RNU4-53P-201ENST00000410828 GCNAQ96QF7 691 aa2.59□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms