RNA–Protein interactions for RNA: ENST00000410080.5

PRPF40A-202, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PRPF40A, Length 8,048 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-202ENST00000410080 USP39Q53GS9 565 aaKnown RBP11.75□□□□□ -0.53
PRPF40A-202ENST00000410080 LRRC71Q8N4P6 559 aa11.75□□□□□ -0.53
PRPF40A-202ENST00000410080 SH3GLB2Q9NR46 395 aa11.75□□□□□ -0.53
PRPF40A-202ENST00000410080 ZW10O43264 779 aa11.75□□□□□ -0.53
PRPF40A-202ENST00000410080 PQBP1O60828 265 aaKnown RBP11.75□□□□□ -0.53
PRPF40A-202ENST00000410080 GUCY2CP25092 1073 aa11.75□□□□□ -0.53
PRPF40A-202ENST00000410080 HIRAP54198 1017 aaPredicted RBP11.75□□□□□ -0.53
PRPF40A-202ENST00000410080 ABCE1P61221 599 aaKnown RBP11.75□□□□□ -0.53
PRPF40A-202ENST00000410080 DRAP1Q14919 205 aaPredicted RBP11.75□□□□□ -0.53
PRPF40A-202ENST00000410080 MAPRE1Q15691 268 aaKnown RBP11.75□□□□□ -0.53
PRPF40A-202ENST00000410080 UCMAQ8WVF2 138 aa11.75□□□□□ -0.53
PRPF40A-202ENST00000410080 RAD54LQ92698 747 aa11.75□□□□□ -0.53
PRPF40A-202ENST00000410080 MCEEQ96PE7 176 aa11.75□□□□□ -0.53
PRPF40A-202ENST00000410080 STRBPQ96SI9 672 aaKnown RBP11.75□□□□□ -0.53
PRPF40A-202ENST00000410080 SPATA31A3Q5VYP0 1347 aa11.75□□□□□ -0.53
PRPF40A-202ENST00000410080 NCF1BA6NI72 391 aaPredicted RBP11.75□□□□□ -0.53
PRPF40A-202ENST00000410080 CCDC85CA6NKD9 419 aa11.75□□□□□ -0.53
PRPF40A-202ENST00000410080 NCF1CA8MVU1 366 aaPredicted RBP11.75□□□□□ -0.53
PRPF40A-202ENST00000410080 EIF3DO15371 548 aaKnown RBP eCLIP11.75□□□□□ -0.532e-6■■□□□ 13.1
PRPF40A-202ENST00000410080 ENO1P06733 434 aaKnown RBP11.75□□□□□ -0.53
PRPF40A-202ENST00000410080 NCF1P14598 390 aaPredicted RBP11.75□□□□□ -0.53
PRPF40A-202ENST00000410080 SERPINB4P48594 390 aa11.75□□□□□ -0.53
PRPF40A-202ENST00000410080 CYTH1Q15438 398 aa11.75□□□□□ -0.53
PRPF40A-202ENST00000410080 MYH15Q9Y2K3 1946 aa11.74□□□□□ -0.53
PRPF40A-202ENST00000410080 AKAP10O43572 662 aa11.74□□□□□ -0.53
PRPF40A-202ENST00000410080 NPTXRO95502 500 aa11.74□□□□□ -0.53
PRPF40A-202ENST00000410080 PRR29P0C7W0 189 aa11.74□□□□□ -0.53
PRPF40A-202ENST00000410080 AKAP5P24588 427 aa11.74□□□□□ -0.53
PRPF40A-202ENST00000410080 FEN1P39748 380 aaKnown RBP11.74□□□□□ -0.53
PRPF40A-202ENST00000410080 RIN3Q8TB24 985 aa11.74□□□□□ -0.53
PRPF40A-202ENST00000410080 SNF8Q96H20 258 aa11.74□□□□□ -0.53
PRPF40A-202ENST00000410080 SERAC1Q96JX3 654 aa11.74□□□□□ -0.53
PRPF40A-202ENST00000410080 ADAM33Q9BZ11 813 aa11.74□□□□□ -0.53
PRPF40A-202ENST00000410080 MRFAP1Q9Y605 127 aa11.74□□□□□ -0.53
PRPF40A-202ENST00000410080 TCN1P20061 433 aaPredicted RBP11.74□□□□□ -0.53
PRPF40A-202ENST00000410080 SP100P23497 879 aaPredicted RBP11.74□□□□□ -0.53
PRPF40A-202ENST00000410080 S100A5P33763 92 aa11.74□□□□□ -0.53
PRPF40A-202ENST00000410080 MKRN4PQ13434 485 aaPredicted RBP11.74□□□□□ -0.53
PRPF40A-202ENST00000410080 PDIA6Q15084 440 aa11.74□□□□□ -0.53
PRPF40A-202ENST00000410080 TSPAN17Q96FV3 270 aa11.74□□□□□ -0.53
PRPF40A-202ENST00000410080 TASP1Q9H6P5 420 aa11.74□□□□□ -0.53
PRPF40A-202ENST00000410080 LIMA1Q9UHB6 759 aaKnown RBP11.74□□□□□ -0.53
PRPF40A-202ENST00000410080 CDK12Q9NYV4 1490 aaPredicted RBP11.74□□□□□ -0.53
PRPF40A-202ENST00000410080 CLASP2O75122 1294 aaKnown RBP11.74□□□□□ -0.53
PRPF40A-202ENST00000410080 P4HBP07237 508 aaKnown RBP11.74□□□□□ -0.53
PRPF40A-202ENST00000410080 GRK3P35626 688 aa11.74□□□□□ -0.53
PRPF40A-202ENST00000410080 MIIPQ5JXC2 388 aa11.74□□□□□ -0.53
PRPF40A-202ENST00000410080 RARS2Q5T160 578 aaKnown RBP11.74□□□□□ -0.53
PRPF40A-202ENST00000410080 SYTL1Q8IYJ3 562 aa11.74□□□□□ -0.53
PRPF40A-202ENST00000410080 REXO4Q9GZR2 422 aaKnown RBP11.74□□□□□ -0.53
PRPF40A-202ENST00000410080 CFAP99D6REC4 459 aa11.74□□□□□ -0.53
PRPF40A-202ENST00000410080 MBL2P11226 248 aaPredicted RBP11.74□□□□□ -0.53
PRPF40A-202ENST00000410080 TAP1Q03518 808 aa11.74□□□□□ -0.53
PRPF40A-202ENST00000410080 GABPB1Q06547 395 aaPredicted RBP11.74□□□□□ -0.53
PRPF40A-202ENST00000410080 PGS1Q32NB8 556 aa11.74□□□□□ -0.53
PRPF40A-202ENST00000410080 PADI4Q9UM07 663 aa11.74□□□□□ -0.53
PRPF40A-202ENST00000410080 TET3O43151 1660 aa11.74□□□□□ -0.53
PRPF40A-202ENST00000410080 C17orf102A2RUQ5 167 aa11.74□□□□□ -0.53
PRPF40A-202ENST00000410080 F5H6K3 240 aa11.74□□□□□ -0.53
PRPF40A-202ENST00000410080 MYO1CO00159 1063 aa11.74□□□□□ -0.53
PRPF40A-202ENST00000410080 CD4P01730 458 aa11.74□□□□□ -0.53
PRPF40A-202ENST00000410080 HNRNPCP07910 306 aaKnown RBP eCLIP11.74□□□□□ -0.534e-6■■■□□ 18.4
PRPF40A-202ENST00000410080 KLRC3Q07444 240 aa11.74□□□□□ -0.53
PRPF40A-202ENST00000410080 TRIM71Q2Q1W2 868 aaKnown RBP11.74□□□□□ -0.53
PRPF40A-202ENST00000410080 NBPF15Q8N660 670 aa11.74□□□□□ -0.53
PRPF40A-202ENST00000410080 CSGALNACT1Q8TDX6 532 aa11.74□□□□□ -0.53
PRPF40A-202ENST00000410080 OSBPL6Q9BZF3 934 aa11.74□□□□□ -0.53
PRPF40A-202ENST00000410080 PCDHB12Q9Y5F1 795 aa11.74□□□□□ -0.53
PRPF40A-202ENST00000410080 HEATR9A2RTY3 570 aa11.74□□□□□ -0.53
PRPF40A-202ENST00000410080 NDUFS2O75306 463 aa11.74□□□□□ -0.53
PRPF40A-202ENST00000410080 RPS6P62753 249 aaKnown RBP11.74□□□□□ -0.53
PRPF40A-202ENST00000410080 CUL4AQ13619 759 aa11.74□□□□□ -0.53
PRPF40A-202ENST00000410080 SMTNL2Q2TAL5 461 aa11.74□□□□□ -0.53
PRPF40A-202ENST00000410080 GOLGA7BQ2TAP0 167 aa11.74□□□□□ -0.53
PRPF40A-202ENST00000410080 FUT11Q495W5 492 aa11.74□□□□□ -0.53
PRPF40A-202ENST00000410080 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.74□□□□□ -0.53
PRPF40A-202ENST00000410080 TDRKHQ9Y2W6 561 aaKnown RBP11.74□□□□□ -0.53
PRPF40A-202ENST00000410080 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.74□□□□□ -0.53
PRPF40A-202ENST00000410080 TK2O00142 265 aa11.73□□□□□ -0.53
PRPF40A-202ENST00000410080 ODC1P11926 461 aa11.73□□□□□ -0.53
PRPF40A-202ENST00000410080 CNTN1Q12860 1018 aa11.73□□□□□ -0.53
PRPF40A-202ENST00000410080 UNC13DQ70J99 1090 aa11.73□□□□□ -0.53
PRPF40A-202ENST00000410080 GLT1D1Q96MS3 346 aa11.73□□□□□ -0.53
PRPF40A-202ENST00000410080 CIPCQ9C0C6 399 aa11.73□□□□□ -0.53
PRPF40A-202ENST00000410080 GGA3Q9NZ52 723 aa11.73□□□□□ -0.53
PRPF40A-202ENST00000410080 ENO3P13929 434 aaPredicted RBP11.73□□□□□ -0.53
PRPF40A-202ENST00000410080 RESTQ13127 1097 aa11.73□□□□□ -0.53
PRPF40A-202ENST00000410080 NCAPHQ15003 741 aa11.73□□□□□ -0.53
PRPF40A-202ENST00000410080 RESP18Q5W5W9 173 aa11.73□□□□□ -0.53
PRPF40A-202ENST00000410080 C18orf8Q96DM3 657 aa11.73□□□□□ -0.53
PRPF40A-202ENST00000410080 MKL2Q9ULH7 1088 aa11.73□□□□□ -0.53
PRPF40A-202ENST00000410080 ADCY10Q96PN6 1610 aa11.73□□□□□ -0.53
PRPF40A-202ENST00000410080 MYL2P10916 166 aa11.73□□□□□ -0.53
PRPF40A-202ENST00000410080 PYGMP11217 842 aa11.73□□□□□ -0.53
PRPF40A-202ENST00000410080 IFNAR1P17181 557 aa11.73□□□□□ -0.53
PRPF40A-202ENST00000410080 INPP5AQ14642 412 aa11.73□□□□□ -0.53
PRPF40A-202ENST00000410080 CLEC16AQ2KHT3 1053 aa11.73□□□□□ -0.53
PRPF40A-202ENST00000410080 GALNTL6Q49A17 601 aa11.73□□□□□ -0.53
PRPF40A-202ENST00000410080 TRIM65Q6PJ69 517 aa11.73□□□□□ -0.53
PRPF40A-202ENST00000410080 GPRC5AQ8NFJ5 357 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms