RNA–Protein interactions for RNA: ENST00000409886.3

RGPD3-202, Transcript of RANBP2-like and GRIP domain containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RGPD3, Length 5,594 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3-202ENST00000409886 IER2Q9BTL4 223 aa3.35□□□□□ -1.87
RGPD3-202ENST00000409886 DSCC1Q9BVC3 393 aa3.35□□□□□ -1.87
RGPD3-202ENST00000409886 PHF20Q9BVI0 1012 aa3.35□□□□□ -1.87
RGPD3-202ENST00000409886 PSTPIP2Q9H939 334 aa3.35□□□□□ -1.87
RGPD3-202ENST00000409886 SAE1Q9UBE0 346 aaPredicted RBP3.35□□□□□ -1.87
RGPD3-202ENST00000409886 STK38LQ9Y2H1 464 aa3.35□□□□□ -1.87
RGPD3-202ENST00000409886 PDS5AQ29RF7 1337 aaKnown RBP3.35□□□□□ -1.87
RGPD3-202ENST00000409886 CNTNAP5Q8WYK1 1306 aa3.35□□□□□ -1.87
RGPD3-202ENST00000409886 SPTBN4Q9H254 2564 aa3.35□□□□□ -1.87
RGPD3-202ENST00000409886 FAM221BA6H8Z2 402 aa3.35□□□□□ -1.87
RGPD3-202ENST00000409886 ARHGAP33O14559 1287 aa3.35□□□□□ -1.87
RGPD3-202ENST00000409886 CYB561D2O14569 222 aa3.35□□□□□ -1.87
RGPD3-202ENST00000409886 AKAP3O75969 853 aa3.35□□□□□ -1.87
RGPD3-202ENST00000409886 TDP2O95551 362 aa3.35□□□□□ -1.87
RGPD3-202ENST00000409886 ABCB4P21439 1286 aa3.35□□□□□ -1.87
RGPD3-202ENST00000409886 SLC5A2P31639 672 aa3.35□□□□□ -1.87
RGPD3-202ENST00000409886 MMP13P45452 471 aa3.35□□□□□ -1.87
RGPD3-202ENST00000409886 PTDSS1P48651 473 aaKnown RBP3.35□□□□□ -1.87
RGPD3-202ENST00000409886 PSMD7P51665 324 aa3.35□□□□□ -1.87
RGPD3-202ENST00000409886 JAG1P78504 1218 aa3.35□□□□□ -1.87
RGPD3-202ENST00000409886 PPFIA1Q13136 1202 aa3.35□□□□□ -1.87
RGPD3-202ENST00000409886 COG2Q14746 738 aa3.35□□□□□ -1.87
RGPD3-202ENST00000409886 LONRF1Q17RB8 773 aa3.35□□□□□ -1.87
RGPD3-202ENST00000409886 KCNT2Q6UVM3 1135 aa3.35□□□□□ -1.87
RGPD3-202ENST00000409886 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP3.35□□□□□ -1.87
RGPD3-202ENST00000409886 DTWD2Q8NBA8 298 aa3.35□□□□□ -1.87
RGPD3-202ENST00000409886 GIMAP8Q8ND71 665 aaPredicted RBP3.35□□□□□ -1.87
RGPD3-202ENST00000409886 B4GALNT2Q8NHY0 566 aa3.35□□□□□ -1.87
RGPD3-202ENST00000409886 HAS1Q92839 578 aa3.35□□□□□ -1.87
RGPD3-202ENST00000409886 CUL5Q93034 780 aa3.35□□□□□ -1.87
RGPD3-202ENST00000409886 USP29Q9HBJ7 922 aa3.35□□□□□ -1.87
RGPD3-202ENST00000409886 SCUBE2Q9NQ36 999 aa3.35□□□□□ -1.87
RGPD3-202ENST00000409886 EVLQ9UI08 416 aaPredicted RBP3.35□□□□□ -1.87
RGPD3-202ENST00000409886 NAGPAQ9UK23 515 aa3.35□□□□□ -1.87
RGPD3-202ENST00000409886 LRRC42Q9Y546 428 aa3.35□□□□□ -1.87
RGPD3-202ENST00000409886 MED12LQ86YW9 2145 aa3.35□□□□□ -1.87
RGPD3-202ENST00000409886 HMX2A2RU54 273 aa3.34□□□□□ -1.87
RGPD3-202ENST00000409886 GMNCA6NCL1 334 aa3.34□□□□□ -1.87
RGPD3-202ENST00000409886 KIF2AO00139 706 aaPredicted RBP3.34□□□□□ -1.87
RGPD3-202ENST00000409886 MYL1P05976 194 aa3.34□□□□□ -1.87
RGPD3-202ENST00000409886 HOXB3P14651 431 aaPredicted RBP3.34□□□□□ -1.87
RGPD3-202ENST00000409886 RPL21P46778 160 aaKnown RBP3.34□□□□□ -1.87
RGPD3-202ENST00000409886 GYG1P46976 350 aa3.34□□□□□ -1.87
RGPD3-202ENST00000409886 METAP2P50579 478 aaKnown RBP eCLIP3.34□□□□□ -1.87
RGPD3-202ENST00000409886 IFITM3Q01628 133 aa3.34□□□□□ -1.87
RGPD3-202ENST00000409886 SMAD1Q15797 465 aaKnown RBP3.34□□□□□ -1.87
RGPD3-202ENST00000409886 INF2Q27J81 1249 aa3.34□□□□□ -1.87
RGPD3-202ENST00000409886 SYCP2LQ5T4T6 812 aa3.34□□□□□ -1.87
RGPD3-202ENST00000409886 ZNF654Q8IZM8 581 aa3.34□□□□□ -1.87
RGPD3-202ENST00000409886 MAGEB6Q8N7X4 407 aa3.34□□□□□ -1.87
RGPD3-202ENST00000409886 NELFBQ8WX92 580 aa3.34□□□□□ -1.87
RGPD3-202ENST00000409886 FERMT2Q96AC1 680 aa3.34□□□□□ -1.87
RGPD3-202ENST00000409886 MSLNLQ96KJ4 702 aa3.34□□□□□ -1.87
RGPD3-202ENST00000409886 ATP6V1G3Q96LB4 118 aa3.34□□□□□ -1.87
RGPD3-202ENST00000409886 C9orf72Q96LT7 481 aa3.34□□□□□ -1.87
RGPD3-202ENST00000409886 NUP88Q99567 741 aaPredicted RBP3.34□□□□□ -1.87
RGPD3-202ENST00000409886 PRMT1Q99873 361 aaKnown RBP3.34□□□□□ -1.87
RGPD3-202ENST00000409886 NOC4LQ9BVI4 516 aaKnown RBP3.34□□□□□ -1.87
RGPD3-202ENST00000409886 NUP85Q9BW27 656 aa3.34□□□□□ -1.87
RGPD3-202ENST00000409886 FRMD4AQ9P2Q2 1039 aaPredicted RBP3.34□□□□□ -1.87
RGPD3-202ENST00000409886 SOWAHBA6NEL2 793 aa3.34□□□□□ -1.87
RGPD3-202ENST00000409886 SFI1A8K8P3 1242 aa3.34□□□□□ -1.87
RGPD3-202ENST00000409886 GRXCR1A8MXD5 290 aa3.34□□□□□ -1.87
RGPD3-202ENST00000409886 EYA2O00167 538 aa3.34□□□□□ -1.87
RGPD3-202ENST00000409886 CNMDO75829 334 aa3.34□□□□□ -1.87
RGPD3-202ENST00000409886 MBD4O95243 580 aa3.34□□□□□ -1.87
RGPD3-202ENST00000409886 RB1P06400 928 aa3.34□□□□□ -1.87
RGPD3-202ENST00000409886 PECAM1P16284 738 aaPredicted RBP3.34□□□□□ -1.87
RGPD3-202ENST00000409886 ATP2C1P98194 919 aaPredicted RBP3.34□□□□□ -1.87
RGPD3-202ENST00000409886 PFKPQ01813 784 aa3.34□□□□□ -1.87
RGPD3-202ENST00000409886 DLG1Q12959 904 aa3.34□□□□□ -1.87
RGPD3-202ENST00000409886 MPP3Q13368 585 aa3.34□□□□□ -1.87
RGPD3-202ENST00000409886 CRYMQ14894 314 aa3.34□□□□□ -1.87
RGPD3-202ENST00000409886 MSS51Q4VC12 460 aa3.34□□□□□ -1.87
RGPD3-202ENST00000409886 LEKR1Q6ZMV7 388 aa3.34□□□□□ -1.87
RGPD3-202ENST00000409886 RRAGAQ7L523 313 aa3.34□□□□□ -1.87
RGPD3-202ENST00000409886 IFNL3Q8IZI9 196 aa3.34□□□□□ -1.87
RGPD3-202ENST00000409886 GALNT15Q8N3T1 639 aa3.34□□□□□ -1.87
RGPD3-202ENST00000409886 C12orf50Q8NA57 414 aaPredicted RBP3.34□□□□□ -1.87
RGPD3-202ENST00000409886 NETO2Q8NC67 525 aa3.34□□□□□ -1.87
RGPD3-202ENST00000409886 LNX1Q8TBB1 728 aaPredicted RBP3.34□□□□□ -1.87
RGPD3-202ENST00000409886 HSPBAP1Q96EW2 488 aa3.34□□□□□ -1.87
RGPD3-202ENST00000409886 FIZ1Q96SL8 496 aa3.34□□□□□ -1.87
RGPD3-202ENST00000409886 PHF7Q9BWX1 381 aaPredicted RBP3.34□□□□□ -1.87
RGPD3-202ENST00000409886 SHCBP1LQ9BZQ2 653 aa3.34□□□□□ -1.87
RGPD3-202ENST00000409886 RBM38Q9H0Z9 239 aaKnown RBP3.34□□□□□ -1.87
RGPD3-202ENST00000409886 STARD7Q9NQZ5 370 aa3.34□□□□□ -1.87
RGPD3-202ENST00000409886 CHST7Q9NS84 486 aa3.34□□□□□ -1.87
RGPD3-202ENST00000409886 TBK1Q9UHD2 729 aa3.34□□□□□ -1.87
RGPD3-202ENST00000409886 FBXO4Q9UKT5 387 aa3.34□□□□□ -1.87
RGPD3-202ENST00000409886 LHX6Q9UPM6 363 aa3.34□□□□□ -1.87
RGPD3-202ENST00000409886 EFR3BQ9Y2G0 817 aa3.34□□□□□ -1.87
RGPD3-202ENST00000409886 PCDHA2Q9Y5H9 948 aa3.34□□□□□ -1.87
RGPD3-202ENST00000409886 PKDREJQ9NTG1 2253 aa3.34□□□□□ -1.87
RGPD3-202ENST00000409886 PLOD2O00469 737 aa3.34□□□□□ -1.87
RGPD3-202ENST00000409886 ZNF862O60290 1169 aa3.34□□□□□ -1.87
RGPD3-202ENST00000409886 JUNP05412 331 aaKnown RBP3.34□□□□□ -1.87
RGPD3-202ENST00000409886 AKR1A1P14550 325 aa3.34□□□□□ -1.87
RGPD3-202ENST00000409886 PLCG1P19174 1290 aa3.34□□□□□ -1.87
RGPD3-202ENST00000409886 CLNS1AP54105 237 aaKnown RBP3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 98.8 ms