RNA–Protein interactions for RNA: ENST00000409823.7

PMS1-204, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5 BASIC

Gene PMS1, Length 2,795 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-204ENST00000409823 ZNF560Q96MR9 790 aa13.47□□□□□ -0.25
PMS1-204ENST00000409823 PDCD11Q14690 1871 aaKnown RBP13.47□□□□□ -0.25
PMS1-204ENST00000409823 SOWAHDA6NJG2 315 aa13.47□□□□□ -0.25
PMS1-204ENST00000409823 ALDH2P05091 517 aa13.47□□□□□ -0.25
PMS1-204ENST00000409823 ACO1P21399 889 aaKnown RBP13.47□□□□□ -0.25
PMS1-204ENST00000409823 RPL9P32969 192 aaKnown RBP13.47□□□□□ -0.25
PMS1-204ENST00000409823 STAT1P42224 750 aa13.47□□□□□ -0.25
PMS1-204ENST00000409823 MTF1Q14872 753 aa13.47□□□□□ -0.25
PMS1-204ENST00000409823 SHHQ15465 462 aa13.47□□□□□ -0.25
PMS1-204ENST00000409823 SV2CQ496J9 727 aa13.47□□□□□ -0.25
PMS1-204ENST00000409823 TDRD12Q587J7 1177 aaKnown RBP13.47□□□□□ -0.25
PMS1-204ENST00000409823 CD300LGQ6UXG3 332 aa13.47□□□□□ -0.25
PMS1-204ENST00000409823 DPH6Q7L8W6 267 aa13.47□□□□□ -0.25
PMS1-204ENST00000409823 SHC3Q92529 594 aa13.47□□□□□ -0.25
PMS1-204ENST00000409823 TAF4BQ92750 862 aa13.47□□□□□ -0.25
PMS1-204ENST00000409823 SENP8Q96LD8 212 aa13.47□□□□□ -0.25
PMS1-204ENST00000409823 BAG1Q99933 345 aaPredicted RBP13.47□□□□□ -0.25
PMS1-204ENST00000409823 L1RE1Q9UN81 338 aa13.47□□□□□ -0.25
PMS1-204ENST00000409823 LCHNA4D1U4 455 aa13.46□□□□□ -0.25
PMS1-204ENST00000409823 H0YGN5 161 aa13.46□□□□□ -0.25
PMS1-204ENST00000409823 PDGFRBP09619 1106 aa13.46□□□□□ -0.25
PMS1-204ENST00000409823 MYOGP15173 224 aa13.46□□□□□ -0.25
PMS1-204ENST00000409823 TBXAS1P24557 533 aaPredicted RBP13.46□□□□□ -0.25
PMS1-204ENST00000409823 PNPLA4P41247 253 aa13.46□□□□□ -0.25
PMS1-204ENST00000409823 WSCD1Q658N2 575 aa13.46□□□□□ -0.25
PMS1-204ENST00000409823 IRF2BP2Q7Z5L9 587 aa13.46□□□□□ -0.25
PMS1-204ENST00000409823 HERVK_113Q902F9 699 aa13.46□□□□□ -0.25
PMS1-204ENST00000409823 ZNF689Q96CS4 500 aaPredicted RBP13.46□□□□□ -0.25
PMS1-204ENST00000409823 TWNKQ96RR1 684 aa13.46□□□□□ -0.25
PMS1-204ENST00000409823 LPIN3Q9BQK8 851 aa13.46□□□□□ -0.25
PMS1-204ENST00000409823 MRPL9Q9BYD2 267 aaKnown RBP13.46□□□□□ -0.25
PMS1-204ENST00000409823 VRTNQ9H8Y1 702 aa13.46□□□□□ -0.25
PMS1-204ENST00000409823 PUF60Q9UHX1 559 aaKnown RBP13.46□□□□□ -0.25
PMS1-204ENST00000409823 MRPL42Q9Y6G3 142 aaKnown RBP13.46□□□□□ -0.25
PMS1-204ENST00000409823 TRANK1O15050 2925 aa13.46□□□□□ -0.25
PMS1-204ENST00000409823 HUS1O60921 280 aa13.46□□□□□ -0.26
PMS1-204ENST00000409823 TADA2AO75478 443 aa13.46□□□□□ -0.26
PMS1-204ENST00000409823 CSPG5O95196 566 aa13.46□□□□□ -0.26
PMS1-204ENST00000409823 GALTP07902 379 aa13.46□□□□□ -0.26
PMS1-204ENST00000409823 P4HA1P13674 534 aa13.46□□□□□ -0.26
PMS1-204ENST00000409823 LMO2P25791 158 aa13.46□□□□□ -0.26
PMS1-204ENST00000409823 CLCN1P35523 988 aa13.46□□□□□ -0.26
PMS1-204ENST00000409823 ALDH7A1P49419 539 aaKnown RBP13.46□□□□□ -0.26
PMS1-204ENST00000409823 ASIC2Q16515 512 aa13.46□□□□□ -0.26
PMS1-204ENST00000409823 TAF3Q5VWG9 929 aa13.46□□□□□ -0.26
PMS1-204ENST00000409823 APPL2Q8NEU8 664 aa13.46□□□□□ -0.26
PMS1-204ENST00000409823 OR6B3Q8NGW1 331 aa13.46□□□□□ -0.26
PMS1-204ENST00000409823 BCL7CQ8WUZ0 217 aaPredicted RBP13.46□□□□□ -0.26
PMS1-204ENST00000409823 DDX27Q96GQ7 796 aaKnown RBP13.46□□□□□ -0.26
PMS1-204ENST00000409823 BCO2Q9BYV7 579 aa13.46□□□□□ -0.26
PMS1-204ENST00000409823 HAUS4Q9H6D7 363 aa13.46□□□□□ -0.26
PMS1-204ENST00000409823 CWH43Q9H720 699 aa13.46□□□□□ -0.26
PMS1-204ENST00000409823 ZNHIT6Q9NWK9 470 aaKnown RBP13.46□□□□□ -0.26
PMS1-204ENST00000409823 ARHGAP20Q9P2F6 1191 aa13.46□□□□□ -0.26
PMS1-204ENST00000409823 FAN1Q9Y2M0 1017 aa13.46□□□□□ -0.26
PMS1-204ENST00000409823 NME7Q9Y5B8 376 aa13.46□□□□□ -0.26
PMS1-204ENST00000409823 RFX1P22670 979 aa13.45□□□□□ -0.26
PMS1-204ENST00000409823 ACAT1P24752 427 aaKnown RBP13.45□□□□□ -0.26
PMS1-204ENST00000409823 NDST1P52848 882 aa13.45□□□□□ -0.26
PMS1-204ENST00000409823 KLHL30Q0D2K2 578 aa13.45□□□□□ -0.26
PMS1-204ENST00000409823 CCDC142Q17RM4 750 aa13.45□□□□□ -0.26
PMS1-204ENST00000409823 DCLRE1AQ6PJP8 1040 aa13.45□□□□□ -0.26
PMS1-204ENST00000409823 CEP57Q86XR8 500 aa13.45□□□□□ -0.26
PMS1-204ENST00000409823 TMEM139Q8IV31 216 aa13.45□□□□□ -0.26
PMS1-204ENST00000409823 HERC6Q8IVU3 1022 aa13.45□□□□□ -0.26
PMS1-204ENST00000409823 FAM71AQ8IYT1 594 aa13.45□□□□□ -0.26
PMS1-204ENST00000409823 PDCL2Q8N4E4 241 aa13.45□□□□□ -0.26
PMS1-204ENST00000409823 SLC20A1Q8WUM9 679 aa13.45□□□□□ -0.26
PMS1-204ENST00000409823 TRIM44Q96DX7 344 aaPredicted RBP13.45□□□□□ -0.26
PMS1-204ENST00000409823 RNPC3Q96LT9 517 aaKnown RBP13.45□□□□□ -0.26
PMS1-204ENST00000409823 PANX2Q96RD6 677 aa13.45□□□□□ -0.26
PMS1-204ENST00000409823 EDEM3Q9BZQ6 932 aa13.45□□□□□ -0.26
PMS1-204ENST00000409823 RC3H2Q9HBD1 1191 aaKnown RBP13.45□□□□□ -0.26
PMS1-204ENST00000409823 RNF216Q9NWF9 866 aaPredicted RBP13.45□□□□□ -0.26
PMS1-204ENST00000409823 TLL1O43897 1013 aa13.45□□□□□ -0.26
PMS1-204ENST00000409823 PTK2Q05397 1052 aa13.45□□□□□ -0.26
PMS1-204ENST00000409823 HGSNATQ68CP4 663 aa13.45□□□□□ -0.26
PMS1-204ENST00000409823 SPRED2Q7Z698 418 aa13.45□□□□□ -0.26
PMS1-204ENST00000409823 DNAAF5Q86Y56 855 aa13.45□□□□□ -0.26
PMS1-204ENST00000409823 C12orf29Q8N999 325 aa13.45□□□□□ -0.26
PMS1-204ENST00000409823 RBBP8NLQ8NC74 664 aaPredicted RBP13.45□□□□□ -0.26
PMS1-204ENST00000409823 KBTBD7Q8WVZ9 684 aa13.45□□□□□ -0.26
PMS1-204ENST00000409823 IQCDQ96DY2 449 aa13.45□□□□□ -0.26
PMS1-204ENST00000409823 GPR62Q9BZJ7 368 aa13.45□□□□□ -0.26
PMS1-204ENST00000409823 DPEP3Q9H4B8 488 aa13.45□□□□□ -0.26
PMS1-204ENST00000409823 AIPL1Q9NZN9 384 aa13.45□□□□□ -0.26
PMS1-204ENST00000409823 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.45□□□□□ -0.26
PMS1-204ENST00000409823 UNC80Q8N2C7 3258 aa13.45□□□□□ -0.26
PMS1-204ENST00000409823 CCZ1BP86790 482 aa13.44□□□□□ -0.26
PMS1-204ENST00000409823 CCZ1P86791 482 aaPredicted RBP13.44□□□□□ -0.26
PMS1-204ENST00000409823 ENOSF1Q7L5Y1 443 aa13.44□□□□□ -0.26
PMS1-204ENST00000409823 ADGRF2Q8IZF7 708 aa13.44□□□□□ -0.26
PMS1-204ENST00000409823 RSPH1Q8WYR4 309 aa13.44□□□□□ -0.26
PMS1-204ENST00000409823 UROC1Q96N76 676 aa13.44□□□□□ -0.26
PMS1-204ENST00000409823 UBE2OQ9C0C9 1292 aaKnown RBP13.44□□□□□ -0.26
PMS1-204ENST00000409823 SEPT11Q9NVA2 429 aaKnown RBP13.44□□□□□ -0.26
PMS1-204ENST00000409823 MARCH5Q9NX47 278 aa13.44□□□□□ -0.26
PMS1-204ENST00000409823 GDAP2Q9NXN4 497 aa13.44□□□□□ -0.26
PMS1-204ENST00000409823 MTUS1Q9ULD2 1270 aa13.44□□□□□ -0.26
PMS1-204ENST00000409823 PRUNE2Q8WUY3 3088 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms