RNA–Protein interactions for RNA: ENST00000409531.5

TSPAN4-208, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,339 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-208ENST00000409531 CXorf38Q8TB03 319 aa17.74■□□□□ 0.43
TSPAN4-208ENST00000409531 PABPC5Q96DU9 382 aaKnown RBP17.74■□□□□ 0.43
TSPAN4-208ENST00000409531 ASB2Q96Q27 587 aa17.74■□□□□ 0.43
TSPAN4-208ENST00000409531 TCF25Q9BQ70 676 aa17.74■□□□□ 0.43
TSPAN4-208ENST00000409531 CRACR2AQ9BSW2 395 aa17.74■□□□□ 0.43
TSPAN4-208ENST00000409531 COLEC11Q9BWP8 271 aa17.74■□□□□ 0.43
TSPAN4-208ENST00000409531 TLE6Q9H808 572 aa17.74■□□□□ 0.43
TSPAN4-208ENST00000409531 UBE2ZQ9H832 354 aaPredicted RBP17.74■□□□□ 0.43
TSPAN4-208ENST00000409531 STK39Q9UEW8 545 aa17.74■□□□□ 0.43
TSPAN4-208ENST00000409531 TMEM189-UBE2V1I3L0A0 370 aa17.73■□□□□ 0.43
TSPAN4-208ENST00000409531 TEX33O43247 280 aa17.73■□□□□ 0.43
TSPAN4-208ENST00000409531 ASS1P00966 412 aaKnown RBP17.73■□□□□ 0.43
TSPAN4-208ENST00000409531 CST3P01034 146 aaPredicted RBP17.73■□□□□ 0.43
TSPAN4-208ENST00000409531 P4HA1P13674 534 aa17.73■□□□□ 0.43
TSPAN4-208ENST00000409531 TAF6P49848 677 aa17.73■□□□□ 0.43
TSPAN4-208ENST00000409531 MYL6P60660 151 aa17.73■□□□□ 0.43
TSPAN4-208ENST00000409531 TFF2Q03403 129 aa17.73■□□□□ 0.43
TSPAN4-208ENST00000409531 CTC1Q2NKJ3 1217 aa17.73■□□□□ 0.43
TSPAN4-208ENST00000409531 ZNF699Q32M78 642 aa17.73■□□□□ 0.43
TSPAN4-208ENST00000409531 ADGRD2Q7Z7M1 963 aa17.73■□□□□ 0.43
TSPAN4-208ENST00000409531 VPS52Q8N1B4 723 aa17.73■□□□□ 0.43
TSPAN4-208ENST00000409531 MRPL43Q8N983 215 aaKnown RBP17.73■□□□□ 0.43
TSPAN4-208ENST00000409531 HPDLQ96IR7 371 aa17.73■□□□□ 0.43
TSPAN4-208ENST00000409531 FAXDC2Q96IV6 333 aa17.73■□□□□ 0.43
TSPAN4-208ENST00000409531 FAM81BQ96LP2 452 aa17.73■□□□□ 0.43
TSPAN4-208ENST00000409531 INTS2Q9H0H0 1204 aaKnown RBP17.73■□□□□ 0.43
TSPAN4-208ENST00000409531 IGFLR1Q9H665 355 aa17.73■□□□□ 0.43
TSPAN4-208ENST00000409531 VRTNQ9H8Y1 702 aa17.73■□□□□ 0.43
TSPAN4-208ENST00000409531 ENTPD7Q9NQZ7 604 aa17.73■□□□□ 0.43
TSPAN4-208ENST00000409531 NUB1Q9Y5A7 615 aa17.73■□□□□ 0.43
TSPAN4-208ENST00000409531 PCDHGC5Q9Y5F6 944 aa17.73■□□□□ 0.43
TSPAN4-208ENST00000409531 BRWD1Q9NSI6 2320 aa17.73■□□□□ 0.43
TSPAN4-208ENST00000409531 PLXNA4Q9HCM2 1894 aa17.73■□□□□ 0.43
TSPAN4-208ENST00000409531 ARHGEF37A1IGU5 675 aa17.72■□□□□ 0.43
TSPAN4-208ENST00000409531 B3GAT3O94766 335 aa17.72■□□□□ 0.43
TSPAN4-208ENST00000409531 NOP14P78316 857 aaKnown RBP17.72■□□□□ 0.43
TSPAN4-208ENST00000409531 ADAM15Q13444 863 aa17.72■□□□□ 0.43
TSPAN4-208ENST00000409531 SYCP1Q15431 976 aa17.72■□□□□ 0.43
TSPAN4-208ENST00000409531 ZNF667Q5HYK9 610 aa17.72■□□□□ 0.43
TSPAN4-208ENST00000409531 TJAP1Q5JTD0 557 aa17.72■□□□□ 0.43
TSPAN4-208ENST00000409531 TRIM65Q6PJ69 517 aa17.72■□□□□ 0.43
TSPAN4-208ENST00000409531 RBM23Q86U06 439 aaKnown RBP17.72■□□□□ 0.43
TSPAN4-208ENST00000409531 BCL7CQ8WUZ0 217 aaPredicted RBP17.72■□□□□ 0.43
TSPAN4-208ENST00000409531 SEMA4DQ92854 862 aa17.72■□□□□ 0.43
TSPAN4-208ENST00000409531 PCMTD1Q96MG8 357 aaPredicted RBP17.72■□□□□ 0.43
TSPAN4-208ENST00000409531 NT5C1BQ96P26 610 aa17.72■□□□□ 0.43
TSPAN4-208ENST00000409531 PLCB1Q9NQ66 1216 aa17.72■□□□□ 0.43
TSPAN4-208ENST00000409531 CLDND1Q9NY35 253 aa17.72■□□□□ 0.43
TSPAN4-208ENST00000409531 PRG3Q9Y2Y8 225 aaPredicted RBP17.72■□□□□ 0.43
TSPAN4-208ENST00000409531 DAAM1Q9Y4D1 1078 aa17.72■□□□□ 0.43
TSPAN4-208ENST00000409531 TRAPPC3O43617 180 aa17.72■□□□□ 0.43
TSPAN4-208ENST00000409531 CXCL14O95715 111 aa17.72■□□□□ 0.43
TSPAN4-208ENST00000409531 SLC9A1P19634 815 aa17.72■□□□□ 0.43
TSPAN4-208ENST00000409531 KCNA5P22460 613 aa17.72■□□□□ 0.43
TSPAN4-208ENST00000409531 RFX1P22670 979 aa17.72■□□□□ 0.43
TSPAN4-208ENST00000409531 PON1P27169 355 aa17.72■□□□□ 0.43
TSPAN4-208ENST00000409531 GTF2F1P35269 517 aaKnown RBP eCLIP17.72■□□□□ 0.436e-7■■■■■ 38.6
TSPAN4-208ENST00000409531 NRIP1P48552 1158 aa17.72■□□□□ 0.43
TSPAN4-208ENST00000409531 LILRA4P59901 499 aa17.72■□□□□ 0.43
TSPAN4-208ENST00000409531 SMC1AQ14683 1233 aaKnown RBP17.72■□□□□ 0.43
TSPAN4-208ENST00000409531 PLPP4Q5VZY2 271 aa17.72■□□□□ 0.43
TSPAN4-208ENST00000409531 EP400NLQ6ZTU2 488 aa17.72■□□□□ 0.43
TSPAN4-208ENST00000409531 LMO3Q8TAP4 145 aa17.72■□□□□ 0.43
TSPAN4-208ENST00000409531 MRFAP1L1Q96HT8 127 aa17.72■□□□□ 0.43
TSPAN4-208ENST00000409531 CDCA3Q99618 268 aaPredicted RBP17.72■□□□□ 0.43
TSPAN4-208ENST00000409531 PAAF1Q9BRP4 392 aa17.72■□□□□ 0.43
TSPAN4-208ENST00000409531 XYLT2Q9H1B5 865 aa17.72■□□□□ 0.43
TSPAN4-208ENST00000409531 SIK3Q9Y2K2 1263 aa17.72■□□□□ 0.43
TSPAN4-208ENST00000409531 TTC28Q96AY4 2481 aa17.71■□□□□ 0.43
TSPAN4-208ENST00000409531 HIDE1A8MVS5 230 aa17.71■□□□□ 0.42
TSPAN4-208ENST00000409531 KPNA7A9QM74 516 aa17.71■□□□□ 0.42
TSPAN4-208ENST00000409531 PER2O15055 1255 aa17.71■□□□□ 0.42
TSPAN4-208ENST00000409531 AP5Z1O43299 807 aa17.71■□□□□ 0.42
TSPAN4-208ENST00000409531 TADA2AO75478 443 aa17.71■□□□□ 0.42
TSPAN4-208ENST00000409531 CTSAP10619 480 aa17.71■□□□□ 0.42
TSPAN4-208ENST00000409531 TBXAS1P24557 533 aaPredicted RBP17.71■□□□□ 0.42
TSPAN4-208ENST00000409531 LTBRP36941 435 aa17.71■□□□□ 0.42
TSPAN4-208ENST00000409531 ZNF75DP51815 510 aa17.71■□□□□ 0.42
TSPAN4-208ENST00000409531 TNNC1P63316 161 aa17.71■□□□□ 0.42
TSPAN4-208ENST00000409531 KCNMA1Q12791 1236 aa17.71■□□□□ 0.42
TSPAN4-208ENST00000409531 ELAVL2Q12926 359 aaKnown RBP17.71■□□□□ 0.42
TSPAN4-208ENST00000409531 DUSP6Q16828 381 aa17.71■□□□□ 0.42
TSPAN4-208ENST00000409531 WDR72Q3MJ13 1102 aa17.71■□□□□ 0.42
TSPAN4-208ENST00000409531 EFHBQ8N7U6 833 aa17.71■□□□□ 0.42
TSPAN4-208ENST00000409531 NEK11Q8NG66 645 aa17.71■□□□□ 0.42
TSPAN4-208ENST00000409531 ANP32BQ92688 251 aaKnown RBP17.71■□□□□ 0.42
TSPAN4-208ENST00000409531 IQCDQ96DY2 449 aa17.71■□□□□ 0.42
TSPAN4-208ENST00000409531 PI4K2AQ9BTU6 479 aa17.71■□□□□ 0.42
TSPAN4-208ENST00000409531 LSM14BQ9BX40 385 aaKnown RBP17.71■□□□□ 0.42
TSPAN4-208ENST00000409531 ZBP1Q9H171 429 aa17.71■□□□□ 0.42
TSPAN4-208ENST00000409531 MARCH5Q9NX47 278 aa17.71■□□□□ 0.42
TSPAN4-208ENST00000409531 GDAP2Q9NXN4 497 aa17.71■□□□□ 0.42
TSPAN4-208ENST00000409531 CACNG4Q9UBN1 327 aa17.71■□□□□ 0.42
TSPAN4-208ENST00000409531 APEX2Q9UBZ4 518 aa17.71■□□□□ 0.42
TSPAN4-208ENST00000409531 ADAM28Q9UKQ2 775 aa17.71■□□□□ 0.42
TSPAN4-208ENST00000409531 IRAK3Q9Y616 596 aa17.71■□□□□ 0.42
TSPAN4-208ENST00000409531 C2orf71A6NGG8 1288 aa17.7■□□□□ 0.42
TSPAN4-208ENST00000409531 PPEF2O14830 753 aa17.7■□□□□ 0.42
TSPAN4-208ENST00000409531 KIF4AO95239 1232 aa17.7■□□□□ 0.42
TSPAN4-208ENST00000409531 BMP1P13497 986 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms