RNA–Protein interactions for RNA: ENST00000409357.5

NIF3L1-204, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,679 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-204ENST00000409357 SLC44A4Q53GD3 710 aa11.25□□□□□ -0.61
NIF3L1-204ENST00000409357 TREML2Q5T2D2 321 aa11.25□□□□□ -0.61
NIF3L1-204ENST00000409357 TMCO4Q5TGY1 634 aa11.25□□□□□ -0.61
NIF3L1-204ENST00000409357 RHBDF2Q6PJF5 856 aa11.25□□□□□ -0.61
NIF3L1-204ENST00000409357 SV2BQ7L1I2 683 aa11.25□□□□□ -0.61
NIF3L1-204ENST00000409357 ZBED8Q8IZ13 594 aa11.25□□□□□ -0.61
NIF3L1-204ENST00000409357 PIP4P2Q8N4L2 257 aa11.25□□□□□ -0.61
NIF3L1-204ENST00000409357 CCDC82Q8N4S0 544 aa11.25□□□□□ -0.61
NIF3L1-204ENST00000409357 ERMNQ8TAM6 284 aa11.25□□□□□ -0.61
NIF3L1-204ENST00000409357 MIPEPQ99797 713 aa11.25□□□□□ -0.61
NIF3L1-204ENST00000409357 ARMT1Q9H993 441 aa11.25□□□□□ -0.61
NIF3L1-204ENST00000409357 ZFYVE28Q9HCC9 887 aa11.25□□□□□ -0.61
NIF3L1-204ENST00000409357 ZNHIT2Q9UHR6 403 aa11.25□□□□□ -0.61
NIF3L1-204ENST00000409357 CPA4Q9UI42 421 aa11.25□□□□□ -0.61
NIF3L1-204ENST00000409357 HERC5Q9UII4 1024 aaKnown RBP11.25□□□□□ -0.61
NIF3L1-204ENST00000409357 TRIM17Q9Y577 477 aa11.25□□□□□ -0.61
NIF3L1-204ENST00000409357 MGAMO43451 1857 aa11.25□□□□□ -0.61
NIF3L1-204ENST00000409357 KANSL1LA0AUZ9 987 aa11.24□□□□□ -0.61
NIF3L1-204ENST00000409357 CXCL11O14625 94 aa11.24□□□□□ -0.61
NIF3L1-204ENST00000409357 HNRNPRO43390 633 aaKnown RBP11.24□□□□□ -0.61
NIF3L1-204ENST00000409357 FKBP6O75344 327 aa11.24□□□□□ -0.61
NIF3L1-204ENST00000409357 ZNF189O75820 626 aaPredicted RBP11.24□□□□□ -0.61
NIF3L1-204ENST00000409357 IL1BP01584 269 aa11.24□□□□□ -0.61
NIF3L1-204ENST00000409357 CYP2D6P10635 497 aa11.24□□□□□ -0.61
NIF3L1-204ENST00000409357 HARSP12081 509 aaKnown RBP11.24□□□□□ -0.61
NIF3L1-204ENST00000409357 PDE1BQ01064 536 aa11.24□□□□□ -0.61
NIF3L1-204ENST00000409357 TRMT5Q32P41 509 aaKnown RBP11.24□□□□□ -0.61
NIF3L1-204ENST00000409357 PDCD4Q53EL6 469 aaKnown RBP11.24□□□□□ -0.61
NIF3L1-204ENST00000409357 GADL1Q6ZQY3 521 aa11.24□□□□□ -0.61
NIF3L1-204ENST00000409357 NET1Q7Z628 596 aaPredicted RBP11.24□□□□□ -0.61
NIF3L1-204ENST00000409357 CLNKQ7Z7G1 428 aa11.24□□□□□ -0.61
NIF3L1-204ENST00000409357 CMTR1Q8N1G2 835 aaKnown RBP11.24□□□□□ -0.61
NIF3L1-204ENST00000409357 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.24□□□□□ -0.61
NIF3L1-204ENST00000409357 ENAHQ8N8S7 591 aaPredicted RBP11.24□□□□□ -0.61
NIF3L1-204ENST00000409357 SLC30A5Q8TAD4 765 aa11.24□□□□□ -0.61
NIF3L1-204ENST00000409357 LRRC15Q8TF66 581 aa11.24□□□□□ -0.61
NIF3L1-204ENST00000409357 NSL1Q96IY1 281 aa11.24□□□□□ -0.61
NIF3L1-204ENST00000409357 TTC25Q96NG3 672 aa11.24□□□□□ -0.61
NIF3L1-204ENST00000409357 CCDC77Q9BR77 488 aa11.24□□□□□ -0.61
NIF3L1-204ENST00000409357 KCNK9Q9NPC2 374 aa11.24□□□□□ -0.61
NIF3L1-204ENST00000409357 TYW1Q9NV66 732 aaKnown RBP11.24□□□□□ -0.61
NIF3L1-204ENST00000409357 ETNK2Q9NVF9 386 aa11.24□□□□□ -0.61
NIF3L1-204ENST00000409357 THEGQ9P2T0 379 aa11.24□□□□□ -0.61
NIF3L1-204ENST00000409357 ZFP69BQ9UJL9 534 aa11.24□□□□□ -0.61
NIF3L1-204ENST00000409357 NUB1Q9Y5A7 615 aa11.24□□□□□ -0.61
NIF3L1-204ENST00000409357 DOCK3Q8IZD9 2030 aa11.24□□□□□ -0.61
NIF3L1-204ENST00000409357 NDC80O14777 642 aa11.24□□□□□ -0.61
NIF3L1-204ENST00000409357 PRDM1O75626 825 aa11.24□□□□□ -0.61
NIF3L1-204ENST00000409357 KRT36O76013 467 aa11.24□□□□□ -0.61
NIF3L1-204ENST00000409357 ATP5BP06576 529 aaKnown RBP11.24□□□□□ -0.61
NIF3L1-204ENST00000409357 HNRNPCP07910 306 aaKnown RBP eCLIP11.24□□□□□ -0.61
NIF3L1-204ENST00000409357 TXKP42681 527 aa11.24□□□□□ -0.61
NIF3L1-204ENST00000409357 EMP3P54852 163 aa11.24□□□□□ -0.61
NIF3L1-204ENST00000409357 HMGCS2P54868 508 aa11.24□□□□□ -0.61
NIF3L1-204ENST00000409357 SOX10P56693 466 aa11.24□□□□□ -0.61
NIF3L1-204ENST00000409357 PLOD1Q02809 727 aaPredicted RBP11.24□□□□□ -0.61
NIF3L1-204ENST00000409357 CREB5Q02930 508 aa11.24□□□□□ -0.61
NIF3L1-204ENST00000409357 ASPHQ12797 758 aa11.24□□□□□ -0.61
NIF3L1-204ENST00000409357 SPP2Q13103 211 aa11.24□□□□□ -0.61
NIF3L1-204ENST00000409357 CLPPQ16740 277 aaPredicted RBP11.24□□□□□ -0.61
NIF3L1-204ENST00000409357 EDRF1Q3B7T1 1238 aa11.24□□□□□ -0.61
NIF3L1-204ENST00000409357 ZC2HC1CQ53FD0 456 aaPredicted RBP11.24□□□□□ -0.61
NIF3L1-204ENST00000409357 SYDE2Q5VT97 1194 aa11.24□□□□□ -0.61
NIF3L1-204ENST00000409357 DCAF12L1Q5VU92 463 aa11.24□□□□□ -0.61
NIF3L1-204ENST00000409357 C11orf63Q6NUN7 778 aa11.24□□□□□ -0.61
NIF3L1-204ENST00000409357 C17orf99Q6UX52 265 aa11.24□□□□□ -0.61
NIF3L1-204ENST00000409357 DSTYKQ6XUX3 929 aa11.24□□□□□ -0.61
NIF3L1-204ENST00000409357 FAM133AQ8N9E0 248 aa11.24□□□□□ -0.61
NIF3L1-204ENST00000409357 CALML4Q96GE6 196 aa11.24□□□□□ -0.61
NIF3L1-204ENST00000409357 BTBD9Q96Q07 612 aa11.24□□□□□ -0.61
NIF3L1-204ENST00000409357 FNBP1Q96RU3 617 aa11.24□□□□□ -0.61
NIF3L1-204ENST00000409357 CCDC113Q9H0I3 377 aa11.24□□□□□ -0.61
NIF3L1-204ENST00000409357 CDC42EP4Q9H3Q1 356 aaKnown RBP11.24□□□□□ -0.61
NIF3L1-204ENST00000409357 DCP1AQ9NPI6 582 aaPredicted RBP11.24□□□□□ -0.61
NIF3L1-204ENST00000409357 BTBD7Q9P203 1132 aa11.24□□□□□ -0.61
NIF3L1-204ENST00000409357 NR2E1Q9Y466 385 aa11.24□□□□□ -0.61
NIF3L1-204ENST00000409357 GTPBP10A4D1E9 387 aaKnown RBP11.23□□□□□ -0.61
NIF3L1-204ENST00000409357 TMEM110-MUSTN1A8MSY1 372 aa11.23□□□□□ -0.61
NIF3L1-204ENST00000409357 E9PBE3 544 aa11.23□□□□□ -0.61
NIF3L1-204ENST00000409357 ZNF862O60290 1169 aa11.23□□□□□ -0.61
NIF3L1-204ENST00000409357 CBFA2T3O75081 653 aa11.23□□□□□ -0.61
NIF3L1-204ENST00000409357 PLEKHA8P1O95397 391 aa11.23□□□□□ -0.61
NIF3L1-204ENST00000409357 TGDSO95455 350 aa11.23□□□□□ -0.61
NIF3L1-204ENST00000409357 MAN1A1P33908 653 aa11.23□□□□□ -0.61
NIF3L1-204ENST00000409357 RPL5P46777 297 aaKnown RBP11.23□□□□□ -0.61
NIF3L1-204ENST00000409357 WDR4P57081 412 aaKnown RBP11.23□□□□□ -0.61
NIF3L1-204ENST00000409357 PPARDQ03181 441 aa11.23□□□□□ -0.61
NIF3L1-204ENST00000409357 CALCOCO2Q13137 446 aa11.23□□□□□ -0.61
NIF3L1-204ENST00000409357 BCL2A1Q16548 175 aa11.23□□□□□ -0.61
NIF3L1-204ENST00000409357 KYNUQ16719 465 aa11.23□□□□□ -0.61
NIF3L1-204ENST00000409357 CFAP157Q5JU67 520 aa11.23□□□□□ -0.61
NIF3L1-204ENST00000409357 IFIT1BQ5T764 474 aaKnown RBP11.23□□□□□ -0.61
NIF3L1-204ENST00000409357 FBXO46Q6PJ61 603 aaPredicted RBP11.23□□□□□ -0.61
NIF3L1-204ENST00000409357 Q6ZNX1 250 aa11.23□□□□□ -0.61
NIF3L1-204ENST00000409357 RINLQ6ZS11 566 aa11.23□□□□□ -0.61
NIF3L1-204ENST00000409357 SEPT14Q6ZU15 432 aa11.23□□□□□ -0.61
NIF3L1-204ENST00000409357 EPM2AIP1Q7L775 607 aaPredicted RBP11.23□□□□□ -0.61
NIF3L1-204ENST00000409357 TMEM110Q86TL2 294 aa11.23□□□□□ -0.61
NIF3L1-204ENST00000409357 KBTBD2Q8IY47 623 aa11.23□□□□□ -0.61
NIF3L1-204ENST00000409357 MYOCDQ8IZQ8 938 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms