RNA–Protein interactions for RNA: ENST00000409254.1

LIMS2-203, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 3 BASIC

Gene LIMS2, Length 867 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-203ENST00000409254 SENP8Q96LD8 212 aa13.96□□□□□ -0.17
LIMS2-203ENST00000409254 NAA15Q9BXJ9 866 aaKnown RBP13.96□□□□□ -0.17
LIMS2-203ENST00000409254 TTYH3Q9C0H2 523 aa13.96□□□□□ -0.17
LIMS2-203ENST00000409254 GANQ9H2C0 597 aa13.96□□□□□ -0.17
LIMS2-203ENST00000409254 SIX2Q9NPC8 291 aa13.96□□□□□ -0.17
LIMS2-203ENST00000409254 CNTN6Q9UQ52 1028 aa13.96□□□□□ -0.17
LIMS2-203ENST00000409254 SSX2IPQ9Y2D8 614 aa13.96□□□□□ -0.17
LIMS2-203ENST00000409254 MYO7AQ13402 2215 aa13.96□□□□□ -0.17
LIMS2-203ENST00000409254 TADA2AO75478 443 aa13.95□□□□□ -0.18
LIMS2-203ENST00000409254 SOD2P04179 222 aa13.95□□□□□ -0.18
LIMS2-203ENST00000409254 SLC9A1P19634 815 aa13.95□□□□□ -0.18
LIMS2-203ENST00000409254 FGFR3P22607 806 aa13.95□□□□□ -0.18
LIMS2-203ENST00000409254 WARSP23381 471 aaKnown RBP13.95□□□□□ -0.18
LIMS2-203ENST00000409254 LHX1P48742 406 aa13.95□□□□□ -0.18
LIMS2-203ENST00000409254 BMS1Q14692 1282 aaKnown RBP13.95□□□□□ -0.18
LIMS2-203ENST00000409254 ARID5BQ14865 1188 aa13.95□□□□□ -0.18
LIMS2-203ENST00000409254 CHRDL2Q6WN34 429 aa13.95□□□□□ -0.18
LIMS2-203ENST00000409254 PPM1KQ8N3J5 372 aa13.95□□□□□ -0.18
LIMS2-203ENST00000409254 SHC3Q92529 594 aa13.95□□□□□ -0.18
LIMS2-203ENST00000409254 PAAF1Q9BRP4 392 aa13.95□□□□□ -0.18
LIMS2-203ENST00000409254 CRACR2AQ9BSW2 395 aa13.95□□□□□ -0.18
LIMS2-203ENST00000409254 HERC2P3Q9BVR0 1158 aa13.95□□□□□ -0.18
LIMS2-203ENST00000409254 LSM14BQ9BX40 385 aaKnown RBP13.95□□□□□ -0.18
LIMS2-203ENST00000409254 PBX4Q9BYU1 374 aa13.95□□□□□ -0.18
LIMS2-203ENST00000409254 LMAN2LQ9H0V9 348 aa13.95□□□□□ -0.18
LIMS2-203ENST00000409254 APOBEC3GQ9HC16 384 aaKnown RBP13.95□□□□□ -0.18
LIMS2-203ENST00000409254 IMPACTQ9P2X3 320 aa13.95□□□□□ -0.18
LIMS2-203ENST00000409254 PUF60Q9UHX1 559 aaKnown RBP13.95□□□□□ -0.18
LIMS2-203ENST00000409254 PRG3Q9Y2Y8 225 aaPredicted RBP13.95□□□□□ -0.18
LIMS2-203ENST00000409254 SNX9Q9Y5X1 595 aa13.95□□□□□ -0.18
LIMS2-203ENST00000409254 IRAK3Q9Y616 596 aa13.95□□□□□ -0.18
LIMS2-203ENST00000409254 GREB1Q4ZG55 1949 aa13.94□□□□□ -0.18
LIMS2-203ENST00000409254 GOLGA6L6A8MZA4 724 aa13.94□□□□□ -0.18
LIMS2-203ENST00000409254 GABRDO14764 452 aa13.94□□□□□ -0.18
LIMS2-203ENST00000409254 PPEF2O14830 753 aa13.94□□□□□ -0.18
LIMS2-203ENST00000409254 SPTLC1O15269 473 aa13.94□□□□□ -0.18
LIMS2-203ENST00000409254 NOL4O94818 638 aa13.94□□□□□ -0.18
LIMS2-203ENST00000409254 OAZ2O95190 189 aa13.94□□□□□ -0.18
LIMS2-203ENST00000409254 CA3P07451 260 aa13.94□□□□□ -0.18
LIMS2-203ENST00000409254 CCDC172P0C7W6 258 aa13.94□□□□□ -0.18
LIMS2-203ENST00000409254 DNAJB2P25686 324 aa13.94□□□□□ -0.18
LIMS2-203ENST00000409254 PCSK1P29120 753 aa13.94□□□□□ -0.18
LIMS2-203ENST00000409254 CTNNB1P35222 781 aa13.94□□□□□ -0.18
LIMS2-203ENST00000409254 PLCB2Q00722 1185 aa13.94□□□□□ -0.18
LIMS2-203ENST00000409254 SMARCB1Q12824 385 aa13.94□□□□□ -0.18
LIMS2-203ENST00000409254 MEA1Q16626 185 aa13.94□□□□□ -0.18
LIMS2-203ENST00000409254 USP41Q3LFD5 358 aa13.94□□□□□ -0.18
LIMS2-203ENST00000409254 TIGD5Q53EQ6 642 aa13.94□□□□□ -0.18
LIMS2-203ENST00000409254 PHLDB3Q6NSJ2 640 aa13.94□□□□□ -0.18
LIMS2-203ENST00000409254 DSTYKQ6XUX3 929 aa13.94□□□□□ -0.18
LIMS2-203ENST00000409254 ANKS3Q6ZW76 656 aa13.94□□□□□ -0.18
LIMS2-203ENST00000409254 TMCO2Q7Z6W1 182 aaPredicted RBP13.94□□□□□ -0.18
LIMS2-203ENST00000409254 METTL23Q86XA0 190 aa13.94□□□□□ -0.18
LIMS2-203ENST00000409254 UBR7Q8N806 425 aa13.94□□□□□ -0.18
LIMS2-203ENST00000409254 ZNF397Q8NF99 534 aaPredicted RBP13.94□□□□□ -0.18
LIMS2-203ENST00000409254 PIK3R5Q8WYR1 880 aa13.94□□□□□ -0.18
LIMS2-203ENST00000409254 SYN2Q92777 582 aaPredicted RBP13.94□□□□□ -0.18
LIMS2-203ENST00000409254 STK33Q9BYT3 514 aa13.94□□□□□ -0.18
LIMS2-203ENST00000409254 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.94□□□□□ -0.18
LIMS2-203ENST00000409254 CHST7Q9NS84 486 aa13.94□□□□□ -0.18
LIMS2-203ENST00000409254 FAM207AQ9NSI2 230 aaPredicted RBP13.94□□□□□ -0.18
LIMS2-203ENST00000409254 BARX2Q9UMQ3 279 aaPredicted RBP13.94□□□□□ -0.18
LIMS2-203ENST00000409254 ZNF638Q14966 1978 aaKnown RBP13.94□□□□□ -0.18
LIMS2-203ENST00000409254 LCHNA4D1U4 455 aa13.93□□□□□ -0.18
LIMS2-203ENST00000409254 OR6C75A6NL08 312 aa13.93□□□□□ -0.18
LIMS2-203ENST00000409254 H7C4K7 107 aa13.93□□□□□ -0.18
LIMS2-203ENST00000409254 CYB561D2O14569 222 aa13.93□□□□□ -0.18
LIMS2-203ENST00000409254 AP5Z1O43299 807 aa13.93□□□□□ -0.18
LIMS2-203ENST00000409254 FGF18O76093 207 aa13.93□□□□□ -0.18
LIMS2-203ENST00000409254 ADCY5O95622 1261 aa13.93□□□□□ -0.18
LIMS2-203ENST00000409254 JAM2P57087 298 aa13.93□□□□□ -0.18
LIMS2-203ENST00000409254 BPIFB4P59827 614 aa13.93□□□□□ -0.18
LIMS2-203ENST00000409254 TAP1Q03518 808 aa13.93□□□□□ -0.18
LIMS2-203ENST00000409254 YWHAHQ04917 246 aaPredicted RBP13.93□□□□□ -0.18
LIMS2-203ENST00000409254 MRPL58Q14197 206 aaKnown RBP13.93□□□□□ -0.18
LIMS2-203ENST00000409254 SOWAHAQ2M3V2 549 aa13.93□□□□□ -0.18
LIMS2-203ENST00000409254 FAM109BQ6ICB4 259 aaPredicted RBP13.93□□□□□ -0.18
LIMS2-203ENST00000409254 CNGA4Q8IV77 575 aa13.93□□□□□ -0.18
LIMS2-203ENST00000409254 ADGRF2Q8IZF7 708 aa13.93□□□□□ -0.18
LIMS2-203ENST00000409254 PDCL2Q8N4E4 241 aa13.93□□□□□ -0.18
LIMS2-203ENST00000409254 FAM84AQ96KN4 292 aa13.93□□□□□ -0.18
LIMS2-203ENST00000409254 TNIP3Q96KP6 325 aa13.93□□□□□ -0.18
LIMS2-203ENST00000409254 PCMTD1Q96MG8 357 aaPredicted RBP13.93□□□□□ -0.18
LIMS2-203ENST00000409254 PI4K2AQ9BTU6 479 aa13.93□□□□□ -0.18
LIMS2-203ENST00000409254 TTPALQ9BTX7 342 aa13.93□□□□□ -0.18
LIMS2-203ENST00000409254 SLC28A3Q9HAS3 691 aa13.93□□□□□ -0.18
LIMS2-203ENST00000409254 KIAA1257Q9ULG3 409 aa13.93□□□□□ -0.18
LIMS2-203ENST00000409254 CAPN11Q9UMQ6 739 aa13.93□□□□□ -0.18
LIMS2-203ENST00000409254 L1RE1Q9UN81 338 aa13.93□□□□□ -0.18
LIMS2-203ENST00000409254 CDH23Q9H251 3354 aa13.93□□□□□ -0.18
LIMS2-203ENST00000409254 F8VZ95 297 aa13.92□□□□□ -0.18
LIMS2-203ENST00000409254 H3BNC9 293 aa13.92□□□□□ -0.18
LIMS2-203ENST00000409254 CILPO75339 1184 aa13.92□□□□□ -0.18
LIMS2-203ENST00000409254 GYPCP04921 128 aa13.92□□□□□ -0.18
LIMS2-203ENST00000409254 ITGB1P05556 798 aa13.92□□□□□ -0.18
LIMS2-203ENST00000409254 PAEPP09466 180 aa13.92□□□□□ -0.18
LIMS2-203ENST00000409254 HNRNPH3P31942 346 aaKnown RBP13.92□□□□□ -0.18
LIMS2-203ENST00000409254 GLUD2P49448 558 aa13.92□□□□□ -0.18
LIMS2-203ENST00000409254 ZNF132P52740 706 aa13.92□□□□□ -0.18
LIMS2-203ENST00000409254 RABGGTBP53611 331 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms