RNA–Protein interactions for RNA: ENST00000408314.1

SNORD88A-201, Transcript of small nucleolar RNA, C/D box 88A, humanhuman

BASIC

Gene SNORD88A, Length 91 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88A-201ENST00000408314 CCDC34Q96HJ3 373 aa9.81□□□□□ -0.84
SNORD88A-201ENST00000408314 GCNAQ96QF7 691 aa9.81□□□□□ -0.84
SNORD88A-201ENST00000408314 CORO1BQ9BR76 489 aa9.81□□□□□ -0.84
SNORD88A-201ENST00000408314 SMOC2Q9H3U7 446 aa9.81□□□□□ -0.84
SNORD88A-201ENST00000408314 TBC1D7Q9P0N9 293 aa9.81□□□□□ -0.84
SNORD88A-201ENST00000408314 CGNQ9P2M7 1197 aaKnown RBP9.81□□□□□ -0.84
SNORD88A-201ENST00000408314 TFIP11Q9UBB9 837 aaKnown RBP9.81□□□□□ -0.84
SNORD88A-201ENST00000408314 USP25Q9UHP3 1055 aa9.81□□□□□ -0.84
SNORD88A-201ENST00000408314 ZMYM5Q9UJ78 669 aa9.81□□□□□ -0.84
SNORD88A-201ENST00000408314 ITGA11Q9UKX5 1188 aa9.81□□□□□ -0.84
SNORD88A-201ENST00000408314 YIPF1Q9Y548 306 aa9.81□□□□□ -0.84
SNORD88A-201ENST00000408314 A0A087X0B3 334 aa9.8□□□□□ -0.84
SNORD88A-201ENST00000408314 PVALEFA0A1B0GWK0 134 aa9.8□□□□□ -0.84
SNORD88A-201ENST00000408314 ZNF233A6NK53 670 aa9.8□□□□□ -0.84
SNORD88A-201ENST00000408314 KPNA7A9QM74 516 aa9.8□□□□□ -0.84
SNORD88A-201ENST00000408314 CYB561D2O14569 222 aa9.8□□□□□ -0.84
SNORD88A-201ENST00000408314 NARSO43776 548 aaKnown RBP9.8□□□□□ -0.84
SNORD88A-201ENST00000408314 HUS1O60921 280 aa9.8□□□□□ -0.84
SNORD88A-201ENST00000408314 PRPF40AO75400 957 aaKnown RBP9.8□□□□□ -0.84
SNORD88A-201ENST00000408314 TNNC2P02585 160 aa9.8□□□□□ -0.84
SNORD88A-201ENST00000408314 MYL1P05976 194 aa9.8□□□□□ -0.84
SNORD88A-201ENST00000408314 IGFBP6P24592 240 aaPredicted RBP9.8□□□□□ -0.84
SNORD88A-201ENST00000408314 ADSSP30520 456 aa9.8□□□□□ -0.84
SNORD88A-201ENST00000408314 MAGEA9P43362 315 aa9.8□□□□□ -0.84
SNORD88A-201ENST00000408314 EPHA5P54756 1037 aa9.8□□□□□ -0.84
SNORD88A-201ENST00000408314 MYO1EQ12965 1108 aa9.8□□□□□ -0.84
SNORD88A-201ENST00000408314 E2F4Q16254 413 aa9.8□□□□□ -0.84
SNORD88A-201ENST00000408314 TAF12Q16514 161 aa9.8□□□□□ -0.84
SNORD88A-201ENST00000408314 NFE2Q16621 373 aaPredicted RBP9.8□□□□□ -0.84
SNORD88A-201ENST00000408314 ARHGAP15Q53QZ3 475 aa9.8□□□□□ -0.84
SNORD88A-201ENST00000408314 CWF19L1Q69YN2 538 aaKnown RBP9.8□□□□□ -0.84
SNORD88A-201ENST00000408314 SHC4Q6S5L8 630 aa9.8□□□□□ -0.84
SNORD88A-201ENST00000408314 RNF19BQ6ZMZ0 732 aa9.8□□□□□ -0.84
SNORD88A-201ENST00000408314 UNC13DQ70J99 1090 aa9.8□□□□□ -0.84
SNORD88A-201ENST00000408314 CCDC105Q8IYK2 499 aa9.8□□□□□ -0.84
SNORD88A-201ENST00000408314 TMEM86AQ8N2M4 240 aa9.8□□□□□ -0.84
SNORD88A-201ENST00000408314 TMEM105Q8N8V8 129 aa9.8□□□□□ -0.84
SNORD88A-201ENST00000408314 ITFG1Q8TB96 612 aa9.8□□□□□ -0.84
SNORD88A-201ENST00000408314 GOLGA5Q8TBA6 731 aa9.8□□□□□ -0.84
SNORD88A-201ENST00000408314 FEZF2Q8TBJ5 459 aa9.8□□□□□ -0.84
SNORD88A-201ENST00000408314 SPPL2BQ8TCT7 592 aa9.8□□□□□ -0.84
SNORD88A-201ENST00000408314 GPR152Q8TDT2 470 aa9.8□□□□□ -0.84
SNORD88A-201ENST00000408314 DEPDC1BQ8WUY9 529 aa9.8□□□□□ -0.84
SNORD88A-201ENST00000408314 ATOH1Q92858 354 aaPredicted RBP9.8□□□□□ -0.84
SNORD88A-201ENST00000408314 DNASE1L2Q92874 299 aa9.8□□□□□ -0.84
SNORD88A-201ENST00000408314 FGF14Q92915 247 aa9.8□□□□□ -0.84
SNORD88A-201ENST00000408314 CCDC47Q96A33 483 aaKnown RBP9.8□□□□□ -0.84
SNORD88A-201ENST00000408314 ELSPBP1Q96BH3 223 aa9.8□□□□□ -0.84
SNORD88A-201ENST00000408314 ANKRD36BP1Q96IX9 119 aa9.8□□□□□ -0.84
SNORD88A-201ENST00000408314 C7orf25Q9BPX7 421 aa9.8□□□□□ -0.84
SNORD88A-201ENST00000408314 SLITRK6Q9H5Y7 841 aa9.8□□□□□ -0.84
SNORD88A-201ENST00000408314 ZFP14Q9HCL3 533 aa9.8□□□□□ -0.84
SNORD88A-201ENST00000408314 HCFC1R1Q9NWW0 138 aa9.8□□□□□ -0.84
SNORD88A-201ENST00000408314 MRPS17Q9Y2R5 130 aaKnown RBP9.8□□□□□ -0.84
SNORD88A-201ENST00000408314 TIMM13Q9Y5L4 95 aaPredicted RBP9.8□□□□□ -0.84
SNORD88A-201ENST00000408314 CACNA1HO95180 2353 aa9.8□□□□□ -0.84
SNORD88A-201ENST00000408314 MTMR11A4FU01 709 aa9.79□□□□□ -0.84
SNORD88A-201ENST00000408314 TISP43B9A030 160 aa9.79□□□□□ -0.84
SNORD88A-201ENST00000408314 TULP1O00294 542 aaPredicted RBP9.79□□□□□ -0.84
SNORD88A-201ENST00000408314 NCAM2O15394 837 aa9.79□□□□□ -0.84
SNORD88A-201ENST00000408314 POLR2DO15514 142 aaKnown RBP9.79□□□□□ -0.84
SNORD88A-201ENST00000408314 PRPF6O94906 941 aaKnown RBP9.79□□□□□ -0.84
SNORD88A-201ENST00000408314 KIF20AO95235 890 aa9.79□□□□□ -0.84
SNORD88A-201ENST00000408314 SEC24AO95486 1093 aa9.79□□□□□ -0.84
SNORD88A-201ENST00000408314 MYL4P12829 197 aa9.79□□□□□ -0.84
SNORD88A-201ENST00000408314 MRE11P49959 708 aa9.79□□□□□ -0.84
SNORD88A-201ENST00000408314 GUCY2FP51841 1108 aa9.79□□□□□ -0.84
SNORD88A-201ENST00000408314 KRT85P78386 507 aa9.79□□□□□ -0.84
SNORD88A-201ENST00000408314 RBP5P82980 135 aa9.79□□□□□ -0.84
SNORD88A-201ENST00000408314 MYL7Q01449 175 aa9.79□□□□□ -0.84
SNORD88A-201ENST00000408314 MLF2Q15773 248 aaPredicted RBP9.79□□□□□ -0.84
SNORD88A-201ENST00000408314 PRSS36Q5K4E3 855 aa9.79□□□□□ -0.84
SNORD88A-201ENST00000408314 IER5LQ5T953 404 aa9.79□□□□□ -0.84
SNORD88A-201ENST00000408314 FOXD4L5Q5VV16 416 aaPredicted RBP9.79□□□□□ -0.84
SNORD88A-201ENST00000408314 RESP18Q5W5W9 173 aa9.79□□□□□ -0.84
SNORD88A-201ENST00000408314 CENPPQ6IPU0 288 aa9.79□□□□□ -0.84
SNORD88A-201ENST00000408314 C1orf228Q6PIY5 440 aa9.79□□□□□ -0.84
SNORD88A-201ENST00000408314 PARM1Q6UWI2 310 aa9.79□□□□□ -0.84
SNORD88A-201ENST00000408314 CRELD2Q6UXH1 353 aaPredicted RBP9.79□□□□□ -0.84
SNORD88A-201ENST00000408314 EFCAB13Q8IY85 973 aa9.79□□□□□ -0.84
SNORD88A-201ENST00000408314 FAM200AQ8TCP9 573 aa9.79□□□□□ -0.84
SNORD88A-201ENST00000408314 NOC3LQ8WTT2 800 aaKnown RBP9.79□□□□□ -0.84
SNORD88A-201ENST00000408314 FOXD4L4Q8WXT5 416 aaPredicted RBP9.79□□□□□ -0.84
SNORD88A-201ENST00000408314 ING5Q8WYH8 240 aa9.79□□□□□ -0.84
SNORD88A-201ENST00000408314 SMARCD2Q92925 531 aa9.79□□□□□ -0.84
SNORD88A-201ENST00000408314 IRF7Q92985 503 aa9.79□□□□□ -0.84
SNORD88A-201ENST00000408314 SAAL1Q96ER3 474 aa9.79□□□□□ -0.84
SNORD88A-201ENST00000408314 MCRS1Q96EZ8 462 aa9.79□□□□□ -0.84
SNORD88A-201ENST00000408314 NELL2Q99435 816 aa9.79□□□□□ -0.84
SNORD88A-201ENST00000408314 KXD1Q9BQD3 176 aa9.79□□□□□ -0.84
SNORD88A-201ENST00000408314 OSBPL6Q9BZF3 934 aa9.79□□□□□ -0.84
SNORD88A-201ENST00000408314 TBC1D17Q9HA65 648 aa9.79□□□□□ -0.84
SNORD88A-201ENST00000408314 CA14Q9ULX7 337 aa9.79□□□□□ -0.84
SNORD88A-201ENST00000408314 GTF3C3Q9Y5Q9 886 aa9.79□□□□□ -0.84
SNORD88A-201ENST00000408314 ANK1P16157 1881 aa9.79□□□□□ -0.84
SNORD88A-201ENST00000408314 PPEF2O14830 753 aa9.78□□□□□ -0.84
SNORD88A-201ENST00000408314 ITGB3P05106 788 aa9.78□□□□□ -0.84
SNORD88A-201ENST00000408314 KRT19P08727 400 aa9.78□□□□□ -0.84
SNORD88A-201ENST00000408314 SLFN14P0C7P3 912 aa9.78□□□□□ -0.84
SNORD88A-201ENST00000408314 CEBPBP17676 345 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms