RNA–Protein interactions for RNA: ENST00000404484.8

TPM1-208, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-208ENST00000404484 BTNL10A8MVZ5 291 aa22.46■■□□□ 1.19
TPM1-208ENST00000404484 GHRP10912 638 aa22.46■■□□□ 1.19
TPM1-208ENST00000404484 MYO1EQ12965 1108 aa22.46■■□□□ 1.19
TPM1-208ENST00000404484 LPIN1Q14693 890 aa22.46■■□□□ 1.19
TPM1-208ENST00000404484 ZBTB6Q15916 424 aa22.46■■□□□ 1.19
TPM1-208ENST00000404484 NOP9Q86U38 636 aaKnown RBP22.46■■□□□ 1.19
TPM1-208ENST00000404484 TTC39CQ8N584 583 aa22.46■■□□□ 1.19
TPM1-208ENST00000404484 SMG8Q8ND04 991 aaKnown RBP22.46■■□□□ 1.19
TPM1-208ENST00000404484 CXorf38Q8TB03 319 aa22.46■■□□□ 1.19
TPM1-208ENST00000404484 TRAIPQ9BWF2 469 aa22.46■■□□□ 1.19
TPM1-208ENST00000404484 CYP3A43Q9HB55 503 aa22.46■■□□□ 1.19
TPM1-208ENST00000404484 TRIM10Q9UDY6 481 aa22.46■■□□□ 1.19
TPM1-208ENST00000404484 AGAP1Q9UPQ3 857 aa22.46■■□□□ 1.19
TPM1-208ENST00000404484 SKIP12755 728 aa22.45■■□□□ 1.18
TPM1-208ENST00000404484 AKAP5P24588 427 aa22.45■■□□□ 1.18
TPM1-208ENST00000404484 GPR153Q6NV75 609 aa22.45■■□□□ 1.18
TPM1-208ENST00000404484 TMEM270Q6UE05 265 aa22.45■■□□□ 1.18
TPM1-208ENST00000404484 LRRC52Q8N7C0 313 aa22.45■■□□□ 1.18
TPM1-208ENST00000404484 UBR7Q8N806 425 aa22.45■■□□□ 1.18
TPM1-208ENST00000404484 SLC20A1Q8WUM9 679 aa22.45■■□□□ 1.18
TPM1-208ENST00000404484 HPDLQ96IR7 371 aa22.45■■□□□ 1.18
TPM1-208ENST00000404484 AGO3Q9H9G7 860 aaKnown RBP22.45■■□□□ 1.18
TPM1-208ENST00000404484 SLC4A7Q9Y6M7 1214 aa22.45■■□□□ 1.18
TPM1-208ENST00000404484 TACC1O75410 805 aa22.44■■□□□ 1.18
TPM1-208ENST00000404484 GZMAP12544 262 aa22.44■■□□□ 1.18
TPM1-208ENST00000404484 ATF7P17544 494 aaPredicted RBP22.44■■□□□ 1.18
TPM1-208ENST00000404484 CYP3A5P20815 502 aa22.44■■□□□ 1.18
TPM1-208ENST00000404484 CD52P31358 61 aa22.44■■□□□ 1.18
TPM1-208ENST00000404484 ASPAP45381 313 aa22.44■■□□□ 1.18
TPM1-208ENST00000404484 IFI16Q16666 785 aaKnown RBP22.44■■□□□ 1.18
TPM1-208ENST00000404484 CNKSR3Q6P9H4 555 aa22.44■■□□□ 1.18
TPM1-208ENST00000404484 FAM43BQ6ZT52 329 aaPredicted RBP22.44■■□□□ 1.18
TPM1-208ENST00000404484 RBBP8NLQ8NC74 664 aaPredicted RBP22.44■■□□□ 1.18
TPM1-208ENST00000404484 DBF4BQ8NFT6 615 aa22.44■■□□□ 1.18
TPM1-208ENST00000404484 TRIM58Q8NG06 486 aa22.44■■□□□ 1.18
TPM1-208ENST00000404484 OLIG1Q8TAK6 271 aa22.44■■□□□ 1.18
TPM1-208ENST00000404484 ALS2CR12Q96Q35 445 aa22.44■■□□□ 1.18
TPM1-208ENST00000404484 WDR24Q96S15 920 aa22.44■■□□□ 1.18
TPM1-208ENST00000404484 BCO2Q9BYV7 579 aa22.44■■□□□ 1.18
TPM1-208ENST00000404484 IRX2Q9BZI1 471 aaPredicted RBP22.44■■□□□ 1.18
TPM1-208ENST00000404484 NXF1Q9UBU9 619 aaKnown RBP22.44■■□□□ 1.18
TPM1-208ENST00000404484 MACROD2A1Z1Q3 448 aa22.43■■□□□ 1.18
TPM1-208ENST00000404484 ITGA4P13612 1032 aa22.43■■□□□ 1.18
TPM1-208ENST00000404484 WDR72Q3MJ13 1102 aa22.43■■□□□ 1.18
TPM1-208ENST00000404484 PLEKHG4Q58EX7 1191 aa22.43■■□□□ 1.18
TPM1-208ENST00000404484 ZMAT2Q96NC0 199 aaKnown RBP22.43■■□□□ 1.18
TPM1-208ENST00000404484 NOX5Q96PH1 765 aa22.43■■□□□ 1.18
TPM1-208ENST00000404484 CISHQ9NSE2 258 aa22.43■■□□□ 1.18
TPM1-208ENST00000404484 TFR2Q9UP52 801 aa22.43■■□□□ 1.18
TPM1-208ENST00000404484 CDH23Q9H251 3354 aa22.43■■□□□ 1.18
TPM1-208ENST00000404484 PDCD11Q14690 1871 aaKnown RBP22.43■■□□□ 1.18
TPM1-208ENST00000404484 SMIM28A0A1B0GU29 152 aa22.42■■□□□ 1.18
TPM1-208ENST00000404484 CTAGE9A4FU28 777 aa22.42■■□□□ 1.18
TPM1-208ENST00000404484 ZNF623O75123 536 aa22.42■■□□□ 1.18
TPM1-208ENST00000404484 ABL1P00519 1130 aa22.42■■□□□ 1.18
TPM1-208ENST00000404484 CHRNB2P17787 502 aa22.42■■□□□ 1.18
TPM1-208ENST00000404484 GNA15P30679 374 aa22.42■■□□□ 1.18
TPM1-208ENST00000404484 ZNF132P52740 706 aa22.42■■□□□ 1.18
TPM1-208ENST00000404484 TNNC1P63316 161 aa22.42■■□□□ 1.18
TPM1-208ENST00000404484 TAF3Q5VWG9 929 aa22.42■■□□□ 1.18
TPM1-208ENST00000404484 PPP1R2P3Q6NXS1 205 aa22.42■■□□□ 1.18
TPM1-208ENST00000404484 TRIM72Q6ZMU5 477 aa22.42■■□□□ 1.18
TPM1-208ENST00000404484 SLC35F6Q8N357 371 aa22.42■■□□□ 1.18
TPM1-208ENST00000404484 RNF39Q9H2S5 420 aa22.42■■□□□ 1.18
TPM1-208ENST00000404484 SLC38A7Q9NVC3 462 aa22.42■■□□□ 1.18
TPM1-208ENST00000404484 GIT1Q9Y2X7 761 aa22.42■■□□□ 1.18
TPM1-208ENST00000404484 A0A0A6YYK5 440 aaPredicted RBP22.42■■□□□ 1.18
TPM1-208ENST00000404484 RTN2O75298 545 aa22.42■■□□□ 1.18
TPM1-208ENST00000404484 BAIAP3O94812 1187 aa22.42■■□□□ 1.18
TPM1-208ENST00000404484 TMEM253P0C7T8 217 aa22.42■■□□□ 1.18
TPM1-208ENST00000404484 PBX2P40425 430 aa22.42■■□□□ 1.18
TPM1-208ENST00000404484 PNPLA4P41247 253 aa22.42■■□□□ 1.18
TPM1-208ENST00000404484 FMO1Q01740 532 aa22.42■■□□□ 1.18
TPM1-208ENST00000404484 DSC3Q14574 896 aa22.42■■□□□ 1.18
TPM1-208ENST00000404484 Q7L0L9 218 aa22.42■■□□□ 1.18
TPM1-208ENST00000404484 MRPL10Q7Z7H8 261 aaKnown RBP22.42■■□□□ 1.18
TPM1-208ENST00000404484 CTNNBL1Q8WYA6 563 aaPredicted RBP22.42■■□□□ 1.18
TPM1-208ENST00000404484 DDX1Q92499 740 aaKnown RBP22.42■■□□□ 1.18
TPM1-208ENST00000404484 ZNF560Q96MR9 790 aa22.42■■□□□ 1.18
TPM1-208ENST00000404484 NAPGQ99747 312 aaPredicted RBP22.42■■□□□ 1.18
TPM1-208ENST00000404484 KLK14Q9P0G3 267 aa22.42■■□□□ 1.18
TPM1-208ENST00000404484 DUSP10Q9Y6W6 482 aa22.42■■□□□ 1.18
TPM1-208ENST00000404484 TRIP11Q15643 1979 aa22.41■■□□□ 1.18
TPM1-208ENST00000404484 ANKRD62A6NC57 917 aa22.41■■□□□ 1.18
TPM1-208ENST00000404484 MMEP08473 750 aa22.41■■□□□ 1.18
TPM1-208ENST00000404484 ATP2A2P16615 1042 aaKnown RBP22.41■■□□□ 1.18
TPM1-208ENST00000404484 GUCY2FP51841 1108 aa22.41■■□□□ 1.18
TPM1-208ENST00000404484 IKBKEQ14164 716 aa22.41■■□□□ 1.18
TPM1-208ENST00000404484 GLRA4Q5JXX5 417 aa22.41■■□□□ 1.18
TPM1-208ENST00000404484 SCARA3Q6AZY7 606 aa22.41■■□□□ 1.18
TPM1-208ENST00000404484 SCARA5Q6ZMJ2 495 aa22.41■■□□□ 1.18
TPM1-208ENST00000404484 PGBD4Q96DM1 585 aa22.41■■□□□ 1.18
TPM1-208ENST00000404484 RPS6KC1Q96S38 1066 aa22.41■■□□□ 1.18
TPM1-208ENST00000404484 PACSIN1Q9BY11 444 aa22.41■■□□□ 1.18
TPM1-208ENST00000404484 PBX4Q9BYU1 374 aa22.41■■□□□ 1.18
TPM1-208ENST00000404484 ISCUQ9H1K1 167 aa22.41■■□□□ 1.18
TPM1-208ENST00000404484 PDCL3Q9H2J4 239 aa22.41■■□□□ 1.18
TPM1-208ENST00000404484 UBN1Q9NPG3 1134 aa22.41■■□□□ 1.18
TPM1-208ENST00000404484 TUBGCP4Q9UGJ1 667 aa22.41■■□□□ 1.18
TPM1-208ENST00000404484 ABHD14A-ACY1A0A1B0GW23 586 aa22.4■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms