RNA–Protein interactions for RNA: ENST00000403971.2

HMGB3P19-201, Transcript of high mobility group box 3 pseudogene 19, humanhuman

BASIC

Gene HMGB3P19, Length 560 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P19-201ENST00000403971 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.17□□□□□ -1.42
HMGB3P19-201ENST00000403971 KIF13AQ9H1H9 1805 aa6.17□□□□□ -1.42
HMGB3P19-201ENST00000403971 TTC37Q6PGP7 1564 aa6.17□□□□□ -1.42
HMGB3P19-201ENST00000403971 PTPN23Q9H3S7 1636 aa6.17□□□□□ -1.42
HMGB3P19-201ENST00000403971 FGD6Q6ZV73 1430 aa6.16□□□□□ -1.42
HMGB3P19-201ENST00000403971 GPATCH8Q9UKJ3 1502 aaKnown RBP6.16□□□□□ -1.42
HMGB3P19-201ENST00000403971 ZNF185O15231 689 aa6.16□□□□□ -1.42
HMGB3P19-201ENST00000403971 NBPF7P0C2Y1 421 aaPredicted RBP6.16□□□□□ -1.42
HMGB3P19-201ENST00000403971 MGAT1P26572 445 aa6.16□□□□□ -1.42
HMGB3P19-201ENST00000403971 RNASE9P60153 205 aaKnown RBP6.16□□□□□ -1.42
HMGB3P19-201ENST00000403971 SLFN5Q08AF3 891 aa6.16□□□□□ -1.42
HMGB3P19-201ENST00000403971 CRB2Q5IJ48 1285 aa6.16□□□□□ -1.42
HMGB3P19-201ENST00000403971 FAM102AQ5T9C2 384 aaPredicted RBP6.16□□□□□ -1.42
HMGB3P19-201ENST00000403971 NAIF1Q69YI7 327 aaPredicted RBP6.16□□□□□ -1.42
HMGB3P19-201ENST00000403971 HTR3DQ70Z44 454 aa6.16□□□□□ -1.42
HMGB3P19-201ENST00000403971 PALM2Q8IXS6 379 aa6.16□□□□□ -1.42
HMGB3P19-201ENST00000403971 SLC17A8Q8NDX2 589 aa6.16□□□□□ -1.42
HMGB3P19-201ENST00000403971 ANKS1AQ92625 1134 aa6.16□□□□□ -1.42
HMGB3P19-201ENST00000403971 EDAQ92838 391 aa6.16□□□□□ -1.42
HMGB3P19-201ENST00000403971 NAA15Q9BXJ9 866 aaKnown RBP6.16□□□□□ -1.42
HMGB3P19-201ENST00000403971 KLC2Q9H0B6 622 aa6.16□□□□□ -1.42
HMGB3P19-201ENST00000403971 CNNM1Q9NRU3 951 aa6.16□□□□□ -1.42
HMGB3P19-201ENST00000403971 ST6GALNAC1Q9NSC7 600 aaPredicted RBP6.16□□□□□ -1.42
HMGB3P19-201ENST00000403971 MRPS18AQ9NVS2 196 aaKnown RBP6.16□□□□□ -1.42
HMGB3P19-201ENST00000403971 USP25Q9UHP3 1055 aa6.16□□□□□ -1.42
HMGB3P19-201ENST00000403971 ZDHHC8Q9ULC8 765 aa6.16□□□□□ -1.42
HMGB3P19-201ENST00000403971 TPCN1Q9ULQ1 816 aa6.16□□□□□ -1.42
HMGB3P19-201ENST00000403971 AGAP1Q9UPQ3 857 aa6.16□□□□□ -1.42
HMGB3P19-201ENST00000403971 TCAF1Q9Y4C2 921 aa6.16□□□□□ -1.42
HMGB3P19-201ENST00000403971 XDHP47989 1333 aa6.16□□□□□ -1.42
HMGB3P19-201ENST00000403971 CCNB3Q8WWL7 1395 aa6.16□□□□□ -1.42
HMGB3P19-201ENST00000403971 TCOF1Q13428 1488 aaKnown RBP6.15□□□□□ -1.42
HMGB3P19-201ENST00000403971 DIP2BQ9P265 1576 aa6.15□□□□□ -1.42
HMGB3P19-201ENST00000403971 MAP3K4Q9Y6R4 1608 aa6.15□□□□□ -1.42
HMGB3P19-201ENST00000403971 GOLGA6L6A8MZA4 724 aa6.15□□□□□ -1.42
HMGB3P19-201ENST00000403971 E9PLN8 166 aa6.15□□□□□ -1.42
HMGB3P19-201ENST00000403971 MYO1FO00160 1098 aa6.15□□□□□ -1.42
HMGB3P19-201ENST00000403971 TBX3O15119 743 aa6.15□□□□□ -1.42
HMGB3P19-201ENST00000403971 CYP27B1O15528 508 aa6.15□□□□□ -1.42
HMGB3P19-201ENST00000403971 PLIN1O60240 522 aa6.15□□□□□ -1.42
HMGB3P19-201ENST00000403971 FOXD2O60548 495 aaPredicted RBP6.15□□□□□ -1.42
HMGB3P19-201ENST00000403971 RARBP10826 455 aa6.15□□□□□ -1.42
HMGB3P19-201ENST00000403971 MYF5P13349 255 aa6.15□□□□□ -1.42
HMGB3P19-201ENST00000403971 KCNJ5P48544 419 aa6.15□□□□□ -1.42
HMGB3P19-201ENST00000403971 SELENOPP49908 381 aa6.15□□□□□ -1.42
HMGB3P19-201ENST00000403971 ZNF135P52742 658 aaPredicted RBP6.15□□□□□ -1.42
HMGB3P19-201ENST00000403971 CNGB1Q14028 1251 aaPredicted RBP6.15□□□□□ -1.42
HMGB3P19-201ENST00000403971 R3HDM1Q15032 1099 aaKnown RBP6.15□□□□□ -1.42
HMGB3P19-201ENST00000403971 POLD3Q15054 466 aaPredicted RBP6.15□□□□□ -1.42
HMGB3P19-201ENST00000403971 EMC10Q5UCC4 262 aa6.15□□□□□ -1.42
HMGB3P19-201ENST00000403971 TSHZ3Q63HK5 1081 aa6.15□□□□□ -1.42
HMGB3P19-201ENST00000403971 MARS2Q96GW9 593 aaKnown RBP6.15□□□□□ -1.42
HMGB3P19-201ENST00000403971 VKORC1Q9BQB6 163 aa6.15□□□□□ -1.42
HMGB3P19-201ENST00000403971 IMPG2Q9BZV3 1241 aa6.15□□□□□ -1.42
HMGB3P19-201ENST00000403971 PIH1D1Q9NWS0 290 aaKnown RBP6.15□□□□□ -1.42
HMGB3P19-201ENST00000403971 SMPD4Q9NXE4 827 aa6.15□□□□□ -1.42
HMGB3P19-201ENST00000403971 CFAP97Q9P2B7 532 aa6.15□□□□□ -1.42
HMGB3P19-201ENST00000403971 CPNE7Q9UBL6 633 aa6.15□□□□□ -1.42
HMGB3P19-201ENST00000403971 RAPGEFL1Q9UHV5 662 aa6.15□□□□□ -1.42
HMGB3P19-201ENST00000403971 EIF2B4Q9UI10 523 aaKnown RBP6.15□□□□□ -1.42
HMGB3P19-201ENST00000403971 SORCS3Q9UPU3 1222 aa6.15□□□□□ -1.42
HMGB3P19-201ENST00000403971 USP15Q9Y4E8 981 aaPredicted RBP6.15□□□□□ -1.42
HMGB3P19-201ENST00000403971 AATKQ6ZMQ8 1374 aa6.15□□□□□ -1.43
HMGB3P19-201ENST00000403971 CFAP74Q9C0B2 1584 aa6.14□□□□□ -1.43
HMGB3P19-201ENST00000403971 KRTAP23-1A1A580 65 aa6.14□□□□□ -1.43
HMGB3P19-201ENST00000403971 ANO9A1A5B4 782 aa6.14□□□□□ -1.43
HMGB3P19-201ENST00000403971 GRXCR1A8MXD5 290 aa6.14□□□□□ -1.43
HMGB3P19-201ENST00000403971 MGEA5O60502 916 aa6.14□□□□□ -1.43
HMGB3P19-201ENST00000403971 CKBP12277 381 aa6.14□□□□□ -1.43
HMGB3P19-201ENST00000403971 FCER1AP12319 257 aa6.14□□□□□ -1.43
HMGB3P19-201ENST00000403971 PHKG2P15735 406 aa6.14□□□□□ -1.43
HMGB3P19-201ENST00000403971 SUMO3P55854 103 aaPredicted RBP6.14□□□□□ -1.43
HMGB3P19-201ENST00000403971 UBE4AQ14139 1066 aa6.14□□□□□ -1.43
HMGB3P19-201ENST00000403971 AGAP9Q5VTM2 703 aa6.14□□□□□ -1.43
HMGB3P19-201ENST00000403971 PDPRQ8NCN5 879 aa6.14□□□□□ -1.43
HMGB3P19-201ENST00000403971 APIPQ96GX9 242 aa6.14□□□□□ -1.43
HMGB3P19-201ENST00000403971 ZSWIM1Q9BR11 485 aa6.14□□□□□ -1.43
HMGB3P19-201ENST00000403971 RLIMQ9NVW2 624 aa6.14□□□□□ -1.43
HMGB3P19-201ENST00000403971 VSX1Q9NZR4 365 aaPredicted RBP6.14□□□□□ -1.43
HMGB3P19-201ENST00000403971 CDYLQ9Y232 598 aa6.14□□□□□ -1.43
HMGB3P19-201ENST00000403971 PLCH2O75038 1416 aa6.14□□□□□ -1.43
HMGB3P19-201ENST00000403971 PLSCR1O15162 318 aa6.13□□□□□ -1.43
HMGB3P19-201ENST00000403971 FRS3O43559 492 aa6.13□□□□□ -1.43
HMGB3P19-201ENST00000403971 FAM20BO75063 409 aa6.13□□□□□ -1.43
HMGB3P19-201ENST00000403971 BRAFP15056 766 aa6.13□□□□□ -1.43
HMGB3P19-201ENST00000403971 GCSHP23434 173 aa6.13□□□□□ -1.43
HMGB3P19-201ENST00000403971 ACRV1P26436 265 aa6.13□□□□□ -1.43
HMGB3P19-201ENST00000403971 PIK3CBP42338 1070 aa6.13□□□□□ -1.43
HMGB3P19-201ENST00000403971 ARFIP2P53365 341 aa6.13□□□□□ -1.43
HMGB3P19-201ENST00000403971 PICALMQ13492 652 aa6.13□□□□□ -1.43
HMGB3P19-201ENST00000403971 PRKD1Q15139 912 aaPredicted RBP6.13□□□□□ -1.43
HMGB3P19-201ENST00000403971 PDCD4Q53EL6 469 aaKnown RBP6.13□□□□□ -1.43
HMGB3P19-201ENST00000403971 USP37Q86T82 979 aa6.13□□□□□ -1.43
HMGB3P19-201ENST00000403971 PDSS2Q86YH6 399 aa6.13□□□□□ -1.43
HMGB3P19-201ENST00000403971 RHOT2Q8IXI1 618 aa6.13□□□□□ -1.43
HMGB3P19-201ENST00000403971 AOPEPQ8N6M6 819 aa6.13□□□□□ -1.43
HMGB3P19-201ENST00000403971 NSUN7Q8NE18 718 aaKnown RBP6.13□□□□□ -1.43
HMGB3P19-201ENST00000403971 OR56A1Q8NGH5 318 aa6.13□□□□□ -1.43
HMGB3P19-201ENST00000403971 SVIPQ8NHG7 77 aa6.13□□□□□ -1.43
HMGB3P19-201ENST00000403971 TBCBQ99426 244 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms