RNA–Protein interactions for RNA: ENST00000403162.7

CCDC47-202, Transcript of coiled-coil domain containing 47, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC47, Length 2,195 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-202ENST00000403162 RLFQ13129 1914 aa21.01■□□□□ 0.95
CCDC47-202ENST00000403162 RALAP11233 206 aa21.01■□□□□ 0.95
CCDC47-202ENST00000403162 NPTX2P47972 431 aa21.01■□□□□ 0.95
CCDC47-202ENST00000403162 ZNF157P51786 506 aaPredicted RBP21.01■□□□□ 0.95
CCDC47-202ENST00000403162 GHRHRQ02643 423 aa21.01■□□□□ 0.95
CCDC47-202ENST00000403162 IZUMO3Q5VZ72 239 aa21.01■□□□□ 0.95
CCDC47-202ENST00000403162 GPAT2Q6NUI2 795 aa21.01■□□□□ 0.95
CCDC47-202ENST00000403162 SAPCD2Q86UD0 394 aa21.01■□□□□ 0.95
CCDC47-202ENST00000403162 KIF2BQ8N4N8 673 aa21.01■□□□□ 0.95
CCDC47-202ENST00000403162 ANKEF1Q9NU02 776 aa21.01■□□□□ 0.95
CCDC47-202ENST00000403162 UMODL1Q5DID0 1318 aa21.01■□□□□ 0.95
CCDC47-202ENST00000403162 VPS41P49754 854 aa21■□□□□ 0.95
CCDC47-202ENST00000403162 IL9RQ01113 521 aa21■□□□□ 0.95
CCDC47-202ENST00000403162 MAML1Q92585 1016 aa21■□□□□ 0.95
CCDC47-202ENST00000403162 MS4A4AQ96JQ5 239 aa21■□□□□ 0.95
CCDC47-202ENST00000403162 ASCC2Q9H1I8 757 aaPredicted RBP21■□□□□ 0.95
CCDC47-202ENST00000403162 PCDHB2Q9Y5E7 798 aa21■□□□□ 0.95
CCDC47-202ENST00000403162 CCL15-CCL14A0A0B4J2E2 113 aa21■□□□□ 0.95
CCDC47-202ENST00000403162 FAM47DPA6NHR8 397 aa21■□□□□ 0.95
CCDC47-202ENST00000403162 UNC5CO95185 931 aa21■□□□□ 0.95
CCDC47-202ENST00000403162 KLRC2P26717 231 aa21■□□□□ 0.95
CCDC47-202ENST00000403162 FOXN2P32314 431 aa21■□□□□ 0.95
CCDC47-202ENST00000403162 PSMC5P62195 406 aa21■□□□□ 0.95
CCDC47-202ENST00000403162 MRPS9P82933 396 aaKnown RBP21■□□□□ 0.95
CCDC47-202ENST00000403162 NR1H3Q13133 447 aa21■□□□□ 0.95
CCDC47-202ENST00000403162 DMP1Q13316 513 aaPredicted RBP21■□□□□ 0.95
CCDC47-202ENST00000403162 MTMR1Q13613 665 aa21■□□□□ 0.95
CCDC47-202ENST00000403162 CCL15Q16663 113 aa21■□□□□ 0.95
CCDC47-202ENST00000403162 SLC39A4Q6P5W5 647 aa21■□□□□ 0.95
CCDC47-202ENST00000403162 ECHDC2Q86YB7 292 aa21■□□□□ 0.95
CCDC47-202ENST00000403162 KATNAL2Q8IYT4 538 aa21■□□□□ 0.95
CCDC47-202ENST00000403162 ZCCHC9Q8N567 271 aaKnown RBP21■□□□□ 0.95
CCDC47-202ENST00000403162 ANKLE1Q8NAG6 615 aa21■□□□□ 0.95
CCDC47-202ENST00000403162 REPS2Q8NFH8 660 aa21■□□□□ 0.95
CCDC47-202ENST00000403162 PRCCQ92733 491 aaPredicted RBP21■□□□□ 0.95
CCDC47-202ENST00000403162 UBN1Q9NPG3 1134 aa21■□□□□ 0.95
CCDC47-202ENST00000403162 BATF3Q9NR55 127 aa21■□□□□ 0.95
CCDC47-202ENST00000403162 HOMER2Q9NSB8 354 aa21■□□□□ 0.95
CCDC47-202ENST00000403162 DENND3A2RUS2 1198 aa20.99■□□□□ 0.95
CCDC47-202ENST00000403162 RASA4BC9J798 803 aa20.99■□□□□ 0.95
CCDC47-202ENST00000403162 MAGEB2O15479 319 aa20.99■□□□□ 0.95
CCDC47-202ENST00000403162 RASA4O43374 803 aa20.99■□□□□ 0.95
CCDC47-202ENST00000403162 WFS1O76024 890 aa20.99■□□□□ 0.95
CCDC47-202ENST00000403162 CYP1A1P04798 512 aaPredicted RBP20.99■□□□□ 0.95
CCDC47-202ENST00000403162 LACTBP83111 547 aaPredicted RBP20.99■□□□□ 0.95
CCDC47-202ENST00000403162 TMEM132BQ14DG7 1078 aa20.99■□□□□ 0.95
CCDC47-202ENST00000403162 XKR9Q5GH70 373 aa20.99■□□□□ 0.95
CCDC47-202ENST00000403162 MON1BQ7L1V2 547 aa20.99■□□□□ 0.95
CCDC47-202ENST00000403162 RHOT1Q8IXI2 618 aa20.99■□□□□ 0.95
CCDC47-202ENST00000403162 FBF1Q8TES7 1133 aa20.99■□□□□ 0.95
CCDC47-202ENST00000403162 CLEC4DQ8WXI8 215 aa20.99■□□□□ 0.95
CCDC47-202ENST00000403162 CPA5Q8WXQ8 436 aa20.99■□□□□ 0.95
CCDC47-202ENST00000403162 HEMGNQ9BXL5 484 aa20.99■□□□□ 0.95
CCDC47-202ENST00000403162 STARD13Q9Y3M8 1113 aa20.99■□□□□ 0.95
CCDC47-202ENST00000403162 A8MUI8 341 aa20.99■□□□□ 0.95
CCDC47-202ENST00000403162 NFIBO00712 420 aa20.99■□□□□ 0.95
CCDC47-202ENST00000403162 CALCAP01258 141 aa20.99■□□□□ 0.95
CCDC47-202ENST00000403162 OSBPP22059 807 aa20.99■□□□□ 0.95
CCDC47-202ENST00000403162 NSFP46459 744 aaKnown RBP20.99■□□□□ 0.95
CCDC47-202ENST00000403162 BPIFB4P59827 614 aa20.99■□□□□ 0.95
CCDC47-202ENST00000403162 SEPT14Q6ZU15 432 aa20.99■□□□□ 0.95
CCDC47-202ENST00000403162 ZNF784Q8NCA9 323 aaPredicted RBP20.99■□□□□ 0.95
CCDC47-202ENST00000403162 SPIRE2Q8WWL2 714 aa20.99■□□□□ 0.95
CCDC47-202ENST00000403162 THOC1Q96FV9 657 aaKnown RBP20.99■□□□□ 0.95
CCDC47-202ENST00000403162 C9orf72Q96LT7 481 aa20.99■□□□□ 0.95
CCDC47-202ENST00000403162 NTPCRQ9BSD7 190 aaKnown RBP20.99■□□□□ 0.95
CCDC47-202ENST00000403162 PITPNM3Q9BZ71 974 aa20.99■□□□□ 0.95
CCDC47-202ENST00000403162 OSBPL8Q9BZF1 889 aa20.99■□□□□ 0.95
CCDC47-202ENST00000403162 C1orf112Q9NSG2 853 aa20.99■□□□□ 0.95
CCDC47-202ENST00000403162 TXLNGQ9NUQ3 528 aa20.99■□□□□ 0.95
CCDC47-202ENST00000403162 ABT1Q9ULW3 272 aaKnown RBP20.99■□□□□ 0.95
CCDC47-202ENST00000403162 MAGEA4P43358 317 aa20.98■□□□□ 0.95
CCDC47-202ENST00000403162 JAK3P52333 1124 aa20.98■□□□□ 0.95
CCDC47-202ENST00000403162 WDR4P57081 412 aaKnown RBP20.98■□□□□ 0.95
CCDC47-202ENST00000403162 RGMBQ6NW40 437 aa20.98■□□□□ 0.95
CCDC47-202ENST00000403162 TDRPQ86YL5 185 aa20.98■□□□□ 0.95
CCDC47-202ENST00000403162 MCF2L2Q86YR7 1114 aa20.98■□□□□ 0.95
CCDC47-202ENST00000403162 RASAL3Q86YV0 1011 aa20.98■□□□□ 0.95
CCDC47-202ENST00000403162 BRI3BPQ8WY22 251 aa20.98■□□□□ 0.95
CCDC47-202ENST00000403162 ELMO3Q96BJ8 720 aa20.98■□□□□ 0.95
CCDC47-202ENST00000403162 RAB3IPQ96QF0 476 aaPredicted RBP20.98■□□□□ 0.95
CCDC47-202ENST00000403162 PI4K2AQ9BTU6 479 aa20.98■□□□□ 0.95
CCDC47-202ENST00000403162 KIFC3Q9BVG8 833 aa20.98■□□□□ 0.95
CCDC47-202ENST00000403162 KMT5AQ9NQR1 393 aa20.98■□□□□ 0.95
CCDC47-202ENST00000403162 TRIM33Q9UPN9 1127 aa20.98■□□□□ 0.95
CCDC47-202ENST00000403162 STK38LQ9Y2H1 464 aa20.98■□□□□ 0.95
CCDC47-202ENST00000403162 ASMTLO95671 621 aa20.97■□□□□ 0.95
CCDC47-202ENST00000403162 SLC18A1P54219 525 aa20.97■□□□□ 0.95
CCDC47-202ENST00000403162 OAZ1P54368 228 aa20.97■□□□□ 0.95
CCDC47-202ENST00000403162 ATP11AP98196 1134 aa20.97■□□□□ 0.95
CCDC47-202ENST00000403162 PLA2G4FQ68DD2 849 aa20.97■□□□□ 0.95
CCDC47-202ENST00000403162 SNRNP48Q6IEG0 339 aaKnown RBP20.97■□□□□ 0.95
CCDC47-202ENST00000403162 C15orf39Q6ZRI6 1047 aa20.97■□□□□ 0.95
CCDC47-202ENST00000403162 RGS9BPQ6ZS82 235 aa20.97■□□□□ 0.95
CCDC47-202ENST00000403162 TRABD2AQ86V40 505 aa20.97■□□□□ 0.95
CCDC47-202ENST00000403162 GPD1LQ8N335 351 aa20.97■□□□□ 0.95
CCDC47-202ENST00000403162 EXD1Q8NHP7 514 aa20.97■□□□□ 0.95
CCDC47-202ENST00000403162 GADD45GIP1Q8TAE8 222 aaPredicted RBP20.97■□□□□ 0.95
CCDC47-202ENST00000403162 POMGNT1Q8WZA1 660 aa20.97■□□□□ 0.95
CCDC47-202ENST00000403162 CFAP57Q96MR6 1250 aa20.97■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms