RNA–Protein interactions for RNA: ENST00000399434.2

TNRC18-202, Transcript of trinucleotide repeat containing 18, humanhuman

TSL 2 BASIC

Gene TNRC18, Length 1,459 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18-202ENST00000399434 SV2CQ496J9 727 aa17.36■□□□□ 0.37
TNRC18-202ENST00000399434 TMEM240Q5SV17 173 aa17.36■□□□□ 0.37
TNRC18-202ENST00000399434 ZNF365Q70YC5 407 aa17.36■□□□□ 0.37
TNRC18-202ENST00000399434 OTOP2Q7RTS6 562 aa17.36■□□□□ 0.37
TNRC18-202ENST00000399434 NOP9Q86U38 636 aaKnown RBP17.36■□□□□ 0.37
TNRC18-202ENST00000399434 RBBP8NLQ8NC74 664 aaPredicted RBP17.36■□□□□ 0.37
TNRC18-202ENST00000399434 KBTBD7Q8WVZ9 684 aa17.36■□□□□ 0.37
TNRC18-202ENST00000399434 TOP1MTQ969P6 601 aa17.36■□□□□ 0.37
TNRC18-202ENST00000399434 MRPL45Q9BRJ2 306 aaKnown RBP17.36■□□□□ 0.37
TNRC18-202ENST00000399434 NRDE2Q9H7Z3 1164 aa17.36■□□□□ 0.37
TNRC18-202ENST00000399434 CYP3A43Q9HB55 503 aa17.36■□□□□ 0.37
TNRC18-202ENST00000399434 L1RE1Q9UN81 338 aa17.36■□□□□ 0.37
TNRC18-202ENST00000399434 PCDHB4Q9Y5E5 795 aa17.36■□□□□ 0.37
TNRC18-202ENST00000399434 TBKBP1A7MCY6 615 aa17.35■□□□□ 0.37
TNRC18-202ENST00000399434 ARHGAP6O43182 974 aa17.35■□□□□ 0.37
TNRC18-202ENST00000399434 KRT5P13647 590 aa17.35■□□□□ 0.37
TNRC18-202ENST00000399434 USP8P40818 1118 aa17.35■□□□□ 0.37
TNRC18-202ENST00000399434 RGS19P49795 217 aa17.35■□□□□ 0.37
TNRC18-202ENST00000399434 PTK2Q05397 1052 aa17.35■□□□□ 0.37
TNRC18-202ENST00000399434 KLHL30Q0D2K2 578 aa17.35■□□□□ 0.37
TNRC18-202ENST00000399434 TSR1Q2NL82 804 aaKnown RBP17.35■□□□□ 0.37
TNRC18-202ENST00000399434 TMEM270Q6UE05 265 aa17.35■□□□□ 0.37
TNRC18-202ENST00000399434 TOGARAM2Q6ZUX3 1019 aa17.35■□□□□ 0.37
TNRC18-202ENST00000399434 SLC47A2Q86VL8 602 aa17.35■□□□□ 0.37
TNRC18-202ENST00000399434 ABI1Q8IZP0 508 aa17.35■□□□□ 0.37
TNRC18-202ENST00000399434 EPS8L1Q8TE68 723 aa17.35■□□□□ 0.37
TNRC18-202ENST00000399434 UROC1Q96N76 676 aa17.35■□□□□ 0.37
TNRC18-202ENST00000399434 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.35■□□□□ 0.37
TNRC18-202ENST00000399434 NHEJ1Q9H9Q4 299 aaPredicted RBP17.35■□□□□ 0.37
TNRC18-202ENST00000399434 ZNHIT6Q9NWK9 470 aaKnown RBP17.35■□□□□ 0.37
TNRC18-202ENST00000399434 CXXC1Q9P0U4 656 aaPredicted RBP17.35■□□□□ 0.37
TNRC18-202ENST00000399434 KANSL3Q9P2N6 904 aa17.35■□□□□ 0.37
TNRC18-202ENST00000399434 NENFQ9UMX5 172 aa17.35■□□□□ 0.37
TNRC18-202ENST00000399434 ZKSCAN5Q9Y2L8 839 aa17.35■□□□□ 0.37
TNRC18-202ENST00000399434 REXO2Q9Y3B8 237 aaKnown RBP17.35■□□□□ 0.37
TNRC18-202ENST00000399434 R3HCC1Q9Y3T6 440 aaKnown RBP17.35■□□□□ 0.37
TNRC18-202ENST00000399434 ZNF263O14978 683 aa17.34■□□□□ 0.37
TNRC18-202ENST00000399434 HCRTO43612 131 aa17.34■□□□□ 0.37
TNRC18-202ENST00000399434 EFCAB14O75071 495 aa17.34■□□□□ 0.37
TNRC18-202ENST00000399434 CILPO75339 1184 aa17.34■□□□□ 0.37
TNRC18-202ENST00000399434 AMHP03971 560 aa17.34■□□□□ 0.37
TNRC18-202ENST00000399434 CHRNB2P17787 502 aa17.34■□□□□ 0.37
TNRC18-202ENST00000399434 ORC1Q13415 861 aa17.34■□□□□ 0.37
TNRC18-202ENST00000399434 PAN2Q504Q3 1202 aaKnown RBP17.34■□□□□ 0.37
TNRC18-202ENST00000399434 TDRD12Q587J7 1177 aaKnown RBP17.34■□□□□ 0.37
TNRC18-202ENST00000399434 OSTM1Q86WC4 334 aa17.34■□□□□ 0.37
TNRC18-202ENST00000399434 LRRC43Q8N309 656 aa17.34■□□□□ 0.37
TNRC18-202ENST00000399434 LNX1Q8TBB1 728 aaPredicted RBP17.34■□□□□ 0.37
TNRC18-202ENST00000399434 DDX1Q92499 740 aaKnown RBP17.34■□□□□ 0.37
TNRC18-202ENST00000399434 ZNF689Q96CS4 500 aaPredicted RBP17.34■□□□□ 0.37
TNRC18-202ENST00000399434 DDX27Q96GQ7 796 aaKnown RBP17.34■□□□□ 0.37
TNRC18-202ENST00000399434 ZSWIM1Q9BR11 485 aa17.34■□□□□ 0.37
TNRC18-202ENST00000399434 DESI2Q9BSY9 194 aa17.34■□□□□ 0.37
TNRC18-202ENST00000399434 ELOVL4Q9GZR5 314 aa17.34■□□□□ 0.37
TNRC18-202ENST00000399434 GBF1Q92538 1859 aa17.33■□□□□ 0.37
TNRC18-202ENST00000399434 SSU72P8A0A1W2PR75 194 aa17.33■□□□□ 0.37
TNRC18-202ENST00000399434 I3L4J1 428 aa17.33■□□□□ 0.37
TNRC18-202ENST00000399434 P4HA1P13674 534 aa17.33■□□□□ 0.37
TNRC18-202ENST00000399434 CYP11B1P15538 503 aa17.33■□□□□ 0.37
TNRC18-202ENST00000399434 BRCC3P46736 316 aa17.33■□□□□ 0.37
TNRC18-202ENST00000399434 RAD23BP54727 409 aa17.33■□□□□ 0.37
TNRC18-202ENST00000399434 TIGD5Q53EQ6 642 aa17.33■□□□□ 0.37
TNRC18-202ENST00000399434 PALB2Q86YC2 1186 aa17.33■□□□□ 0.37
TNRC18-202ENST00000399434 C17orf53Q8N3J3 647 aaPredicted RBP17.33■□□□□ 0.37
TNRC18-202ENST00000399434 PDCL2Q8N4E4 241 aa17.33■□□□□ 0.37
TNRC18-202ENST00000399434 HASPINQ8TF76 798 aa17.33■□□□□ 0.37
TNRC18-202ENST00000399434 MRPL9Q9BYD2 267 aaKnown RBP17.33■□□□□ 0.37
TNRC18-202ENST00000399434 SPTLC3Q9NUV7 552 aa17.33■□□□□ 0.37
TNRC18-202ENST00000399434 MARCH5Q9NX47 278 aa17.33■□□□□ 0.37
TNRC18-202ENST00000399434 TMEM189-UBE2V1I3L0A0 370 aa17.32■□□□□ 0.36
TNRC18-202ENST00000399434 FGBP02675 491 aa17.32■□□□□ 0.36
TNRC18-202ENST00000399434 SLC11A1P49279 550 aa17.32■□□□□ 0.36
TNRC18-202ENST00000399434 KIF11P52732 1056 aa17.32■□□□□ 0.36
TNRC18-202ENST00000399434 RNASELQ05823 741 aaKnown RBP17.32■□□□□ 0.36
TNRC18-202ENST00000399434 SMYD5Q6GMV2 418 aa17.32■□□□□ 0.36
TNRC18-202ENST00000399434 FAM117BQ6P1L5 589 aa17.32■□□□□ 0.36
TNRC18-202ENST00000399434 PSRC1Q6PGN9 363 aaPredicted RBP17.32■□□□□ 0.36
TNRC18-202ENST00000399434 SLC4A11Q8NBS3 891 aa17.32■□□□□ 0.36
TNRC18-202ENST00000399434 ACRBPQ8NEB7 543 aa17.32■□□□□ 0.36
TNRC18-202ENST00000399434 SENP8Q96LD8 212 aa17.32■□□□□ 0.36
TNRC18-202ENST00000399434 MMS19Q96T76 1030 aa17.32■□□□□ 0.36
TNRC18-202ENST00000399434 CWH43Q9H720 699 aa17.32■□□□□ 0.36
TNRC18-202ENST00000399434 RNF216Q9NWF9 866 aaPredicted RBP17.32■□□□□ 0.36
TNRC18-202ENST00000399434 PRG3Q9Y2Y8 225 aaPredicted RBP17.32■□□□□ 0.36
TNRC18-202ENST00000399434 A0A087X0T9 212 aa17.31■□□□□ 0.36
TNRC18-202ENST00000399434 DDX3XO00571 662 aaKnown RBP eCLIP17.31■□□□□ 0.362e-7■□□□□ 10.6
TNRC18-202ENST00000399434 CYB561D2O14569 222 aa17.31■□□□□ 0.36
TNRC18-202ENST00000399434 TACC1O75410 805 aa17.31■□□□□ 0.36
TNRC18-202ENST00000399434 B3GAT3O94766 335 aa17.31■□□□□ 0.36
TNRC18-202ENST00000399434 NDUFA10O95299 355 aa17.31■□□□□ 0.36
TNRC18-202ENST00000399434 FAM228BP0C875 321 aa17.31■□□□□ 0.36
TNRC18-202ENST00000399434 PBX3P40426 434 aa17.31■□□□□ 0.36
TNRC18-202ENST00000399434 KCNJ6P48051 423 aa17.31■□□□□ 0.36
TNRC18-202ENST00000399434 NDST1P52848 882 aa17.31■□□□□ 0.36
TNRC18-202ENST00000399434 YWHAEP62258 255 aaKnown RBP17.31■□□□□ 0.36
TNRC18-202ENST00000399434 FMO1Q01740 532 aa17.31■□□□□ 0.36
TNRC18-202ENST00000399434 GFPT1Q06210 699 aaPredicted RBP17.31■□□□□ 0.36
TNRC18-202ENST00000399434 ZNF394Q53GI3 561 aa17.31■□□□□ 0.36
TNRC18-202ENST00000399434 DCLRE1AQ6PJP8 1040 aa17.31■□□□□ 0.36
TNRC18-202ENST00000399434 TMEM173Q86WV6 379 aaPredicted RBP17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms