RNA–Protein interactions for RNA: ENST00000399126.1

COL25A1-201, Transcript of collagen type XXV alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL25A1, Length 2,674 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-201ENST00000399126 KLHL42Q9P2K6 505 aa16.14■□□□□ 0.17
COL25A1-201ENST00000399126 RARBP10826 455 aa16.14■□□□□ 0.17
COL25A1-201ENST00000399126 GRM5P41594 1212 aa16.14■□□□□ 0.17
COL25A1-201ENST00000399126 FAM47CQ5HY64 1035 aa16.14■□□□□ 0.17
COL25A1-201ENST00000399126 SPATA4Q8NEY3 305 aa16.14■□□□□ 0.17
COL25A1-201ENST00000399126 KIF12Q96FN5 646 aa16.14■□□□□ 0.17
COL25A1-201ENST00000399126 NUP85Q9BW27 656 aa16.14■□□□□ 0.17
COL25A1-201ENST00000399126 TRIM7Q9C029 511 aa16.14■□□□□ 0.17
COL25A1-201ENST00000399126 ASB7Q9H672 318 aa16.14■□□□□ 0.17
COL25A1-201ENST00000399126 ABCB6Q9NP58 842 aa16.14■□□□□ 0.17
COL25A1-201ENST00000399126 HMGXB4Q9UGU5 601 aa16.14■□□□□ 0.17
COL25A1-201ENST00000399126 TSKSQ9UJT2 592 aa16.14■□□□□ 0.17
COL25A1-201ENST00000399126 SUFUQ9UMX1 484 aa16.14■□□□□ 0.17
COL25A1-201ENST00000399126 SEC31AO94979 1220 aaKnown RBP16.13■□□□□ 0.17
COL25A1-201ENST00000399126 NOTUMQ6P988 496 aa16.13■□□□□ 0.17
COL25A1-201ENST00000399126 MTG1Q9BT17 334 aaPredicted RBP16.13■□□□□ 0.17
COL25A1-201ENST00000399126 XPNPEP3Q9NQH7 507 aa16.13■□□□□ 0.17
COL25A1-201ENST00000399126 RBM12Q9NTZ6 932 aaKnown RBP16.13■□□□□ 0.17
COL25A1-201ENST00000399126 PPEF2O14830 753 aa16.13■□□□□ 0.17
COL25A1-201ENST00000399126 CYP1A1P04798 512 aaPredicted RBP16.13■□□□□ 0.17
COL25A1-201ENST00000399126 CTSHP09668 335 aa16.13■□□□□ 0.17
COL25A1-201ENST00000399126 ZNF606Q8WXB4 792 aa16.13■□□□□ 0.17
COL25A1-201ENST00000399126 TFAP2BQ92481 460 aa16.13■□□□□ 0.17
COL25A1-201ENST00000399126 RNF39Q9H2S5 420 aa16.13■□□□□ 0.17
COL25A1-201ENST00000399126 CNOT8Q9UFF9 292 aaKnown RBP16.13■□□□□ 0.17
COL25A1-201ENST00000399126 GTF2IRD1Q9UHL9 959 aa16.13■□□□□ 0.17
COL25A1-201ENST00000399126 AGAP1Q9UPQ3 857 aa16.13■□□□□ 0.17
COL25A1-201ENST00000399126 ZMYND10O75800 440 aa16.12■□□□□ 0.17
COL25A1-201ENST00000399126 RRM1P23921 792 aa16.12■□□□□ 0.17
COL25A1-201ENST00000399126 MARCKSL1P49006 195 aa16.12■□□□□ 0.17
COL25A1-201ENST00000399126 BPIFB4P59827 614 aa16.12■□□□□ 0.17
COL25A1-201ENST00000399126 MESDQ14696 234 aa16.12■□□□□ 0.17
COL25A1-201ENST00000399126 DCAF4L1Q3SXM0 396 aa16.12■□□□□ 0.17
COL25A1-201ENST00000399126 RHOT2Q8IXI1 618 aa16.12■□□□□ 0.17
COL25A1-201ENST00000399126 ZNF564Q8TBZ8 553 aaPredicted RBP16.12■□□□□ 0.17
COL25A1-201ENST00000399126 C18orf25Q96B23 403 aaPredicted RBP16.12■□□□□ 0.17
COL25A1-201ENST00000399126 HES6Q96HZ4 224 aa16.12■□□□□ 0.17
COL25A1-201ENST00000399126 TWNKQ96RR1 684 aa16.12■□□□□ 0.17
COL25A1-201ENST00000399126 OSBPL7Q9BZF2 842 aa16.12■□□□□ 0.17
COL25A1-201ENST00000399126 UPF3AQ9H1J1 476 aaKnown RBP16.12■□□□□ 0.17
COL25A1-201ENST00000399126 KLK14Q9P0G3 267 aa16.12■□□□□ 0.17
COL25A1-201ENST00000399126 TUBGCP4Q9UGJ1 667 aa16.12■□□□□ 0.17
COL25A1-201ENST00000399126 CYP1A2P05177 515 aa16.12■□□□□ 0.17
COL25A1-201ENST00000399126 ASGR1P07306 291 aa16.12■□□□□ 0.17
COL25A1-201ENST00000399126 VSNL1P62760 191 aa16.12■□□□□ 0.17
COL25A1-201ENST00000399126 NOMO3P69849 1222 aa16.12■□□□□ 0.17
COL25A1-201ENST00000399126 ZNF667Q5HYK9 610 aa16.12■□□□□ 0.17
COL25A1-201ENST00000399126 DCAF12L1Q5VU92 463 aa16.12■□□□□ 0.17
COL25A1-201ENST00000399126 MCOLN2Q8IZK6 566 aa16.12■□□□□ 0.17
COL25A1-201ENST00000399126 MSANTD4Q8NCY6 345 aa16.12■□□□□ 0.17
COL25A1-201ENST00000399126 HDAC7Q8WUI4 952 aa16.12■□□□□ 0.17
COL25A1-201ENST00000399126 C11orf70Q9BRQ4 267 aa16.12■□□□□ 0.17
COL25A1-201ENST00000399126 DPP3Q9NY33 737 aa16.12■□□□□ 0.17
COL25A1-201ENST00000399126 GTF3C4Q9UKN8 822 aa16.12■□□□□ 0.17
COL25A1-201ENST00000399126 ALG6Q9Y672 507 aa16.12■□□□□ 0.17
COL25A1-201ENST00000399126 RALGAPA2Q2PPJ7 1873 aa16.12■□□□□ 0.17
COL25A1-201ENST00000399126 RECQL4O94761 1208 aa16.12■□□□□ 0.17
COL25A1-201ENST00000399126 CENPCQ03188 943 aa16.12■□□□□ 0.17
COL25A1-201ENST00000399126 KCNA10Q16322 511 aa16.12■□□□□ 0.17
COL25A1-201ENST00000399126 ZNF677Q86XU0 584 aa16.12■□□□□ 0.17
COL25A1-201ENST00000399126 SYCE1Q8N0S2 351 aa16.12■□□□□ 0.17
COL25A1-201ENST00000399126 TAF4BQ92750 862 aa16.12■□□□□ 0.17
COL25A1-201ENST00000399126 TRIM6Q9C030 488 aaPredicted RBP16.12■□□□□ 0.17
COL25A1-201ENST00000399126 PLEKHA4Q9H4M7 779 aa16.12■□□□□ 0.17
COL25A1-201ENST00000399126 AMFRQ9UKV5 643 aa16.12■□□□□ 0.17
COL25A1-201ENST00000399126 NOC2LQ9Y3T9 749 aaKnown RBP16.12■□□□□ 0.17
COL25A1-201ENST00000399126 GRIN2DO15399 1336 aa16.11■□□□□ 0.17
COL25A1-201ENST00000399126 DDX3YO15523 660 aaKnown RBP16.11■□□□□ 0.17
COL25A1-201ENST00000399126 CEP104O60308 925 aa16.11■□□□□ 0.17
COL25A1-201ENST00000399126 GJB6O95452 261 aa16.11■□□□□ 0.17
COL25A1-201ENST00000399126 NSFP46459 744 aaKnown RBP16.11■□□□□ 0.17
COL25A1-201ENST00000399126 CDC42EP1Q00587 391 aa16.11■□□□□ 0.17
COL25A1-201ENST00000399126 UBXN11Q5T124 520 aa16.11■□□□□ 0.17
COL25A1-201ENST00000399126 ZNF572Q7Z3I7 529 aaPredicted RBP16.11■□□□□ 0.17
COL25A1-201ENST00000399126 ALG3Q92685 438 aa16.11■□□□□ 0.17
COL25A1-201ENST00000399126 KRT35Q92764 455 aa16.11■□□□□ 0.17
COL25A1-201ENST00000399126 HPDLQ96IR7 371 aa16.11■□□□□ 0.17
COL25A1-201ENST00000399126 SNX27Q96L92 541 aa16.11■□□□□ 0.17
COL25A1-201ENST00000399126 CREBZFQ9NS37 354 aa16.11■□□□□ 0.17
COL25A1-201ENST00000399126 WDR70Q9NW82 654 aa16.11■□□□□ 0.17
COL25A1-201ENST00000399126 THSD7BQ9C0I4 1608 aa16.11■□□□□ 0.17
COL25A1-201ENST00000399126 TRIM66O15016 1216 aa16.11■□□□□ 0.17
COL25A1-201ENST00000399126 GNAT1P11488 350 aa16.11■□□□□ 0.17
COL25A1-201ENST00000399126 CRYBB1P53674 252 aaPredicted RBP16.11■□□□□ 0.17
COL25A1-201ENST00000399126 CFAP221Q4G0U5 840 aa16.11■□□□□ 0.17
COL25A1-201ENST00000399126 AADACL2Q6P093 401 aa16.11■□□□□ 0.17
COL25A1-201ENST00000399126 MMS22LQ6ZRQ5 1243 aa16.11■□□□□ 0.17
COL25A1-201ENST00000399126 MON1BQ7L1V2 547 aa16.11■□□□□ 0.17
COL25A1-201ENST00000399126 FAM228AQ86W67 206 aa16.11■□□□□ 0.17
COL25A1-201ENST00000399126 BCO2Q9BYV7 579 aa16.11■□□□□ 0.17
COL25A1-201ENST00000399126 CWC15Q9P013 229 aaKnown RBP16.11■□□□□ 0.17
COL25A1-201ENST00000399126 C2CD2Q9Y426 696 aa16.11■□□□□ 0.17
COL25A1-201ENST00000399126 PDCD11Q14690 1871 aaKnown RBP16.1■□□□□ 0.17
COL25A1-201ENST00000399126 COMTP21964 271 aa16.1■□□□□ 0.17
COL25A1-201ENST00000399126 PAFAH1B1P43034 410 aa16.1■□□□□ 0.17
COL25A1-201ENST00000399126 HADHBP55084 474 aaKnown RBP16.1■□□□□ 0.17
COL25A1-201ENST00000399126 DAB2IPQ5VWQ8 1189 aa16.1■□□□□ 0.17
COL25A1-201ENST00000399126 C1orf131Q8NDD1 294 aaKnown RBP16.1■□□□□ 0.17
COL25A1-201ENST00000399126 WHAMMQ8TF30 809 aa16.1■□□□□ 0.17
COL25A1-201ENST00000399126 LRRC1Q9BTT6 524 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms