RNA–Protein interactions for RNA: ENST00000398969.7

COL13A1-203, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,267 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-203ENST00000398969 BNIP1Q12981 228 aa27.1■■□□□ 1.93
COL13A1-203ENST00000398969 RBM15Q96T37 977 aaKnown RBP eCLIP27.1■■□□□ 1.93
COL13A1-203ENST00000398969 FHDC1Q9C0D6 1143 aaPredicted RBP27.1■■□□□ 1.93
COL13A1-203ENST00000398969 HAPLN2Q9GZV7 340 aa27.1■■□□□ 1.93
COL13A1-203ENST00000398969 KIAA1217Q5T5P2 1943 aa27.09■■□□□ 1.93
COL13A1-203ENST00000398969 ABHD2P08910 425 aa27.09■■□□□ 1.93
COL13A1-203ENST00000398969 EZRP15311 586 aaKnown RBP27.09■■□□□ 1.93
COL13A1-203ENST00000398969 MAGEA4P43358 317 aa27.09■■□□□ 1.93
COL13A1-203ENST00000398969 KCNJ2P63252 427 aa27.09■■□□□ 1.93
COL13A1-203ENST00000398969 CGB2Q6NT52 195 aa27.09■■□□□ 1.93
COL13A1-203ENST00000398969 GPATCH11Q8N954 259 aa27.09■■□□□ 1.93
COL13A1-203ENST00000398969 KLRG1Q96E93 195 aa27.09■■□□□ 1.93
COL13A1-203ENST00000398969 PLCD4Q9BRC7 762 aa27.09■■□□□ 1.93
COL13A1-203ENST00000398969 PPP2R3BQ9Y5P8 575 aa27.09■■□□□ 1.93
COL13A1-203ENST00000398969 SBF1O95248 1867 aa27.09■■□□□ 1.93
COL13A1-203ENST00000398969 GSTTP1A0A1W2PQM5 241 aa27.09■■□□□ 1.93
COL13A1-203ENST00000398969 NQO1P15559 274 aaKnown RBP27.09■■□□□ 1.93
COL13A1-203ENST00000398969 C1QBPQ07021 282 aaKnown RBP27.09■■□□□ 1.93
COL13A1-203ENST00000398969 ADCY1Q08828 1119 aa27.09■■□□□ 1.93
COL13A1-203ENST00000398969 STRN3Q13033 797 aa27.09■■□□□ 1.93
COL13A1-203ENST00000398969 MTERF2Q49AM1 385 aa27.09■■□□□ 1.93
COL13A1-203ENST00000398969 RBBP8NLQ8NC74 664 aaPredicted RBP27.09■■□□□ 1.93
COL13A1-203ENST00000398969 FOXP3Q9BZS1 431 aa27.09■■□□□ 1.93
COL13A1-203ENST00000398969 SLC9A2Q9UBY0 812 aa27.09■■□□□ 1.93
COL13A1-203ENST00000398969 DOCK5Q9H7D0 1870 aa27.08■■□□□ 1.93
COL13A1-203ENST00000398969 ACTR2P61160 394 aa27.08■■□□□ 1.93
COL13A1-203ENST00000398969 COPS2P61201 443 aa27.08■■□□□ 1.93
COL13A1-203ENST00000398969 NFX1Q12986 1120 aaKnown RBP27.08■■□□□ 1.93
COL13A1-203ENST00000398969 ZNF268Q14587 947 aaPredicted RBP27.08■■□□□ 1.93
COL13A1-203ENST00000398969 CYP4F22Q6NT55 531 aa27.08■■□□□ 1.93
COL13A1-203ENST00000398969 MIS18BP1Q6P0N0 1132 aa27.08■■□□□ 1.93
COL13A1-203ENST00000398969 PPP1R21Q6ZMI0 780 aa27.08■■□□□ 1.93
COL13A1-203ENST00000398969 FEZF2Q8TBJ5 459 aa27.08■■□□□ 1.93
COL13A1-203ENST00000398969 KLHL11Q9NVR0 708 aa27.08■■□□□ 1.93
COL13A1-203ENST00000398969 RBAKQ9NYW8 714 aaPredicted RBP27.08■■□□□ 1.93
COL13A1-203ENST00000398969 CNTN6Q9UQ52 1028 aa27.08■■□□□ 1.93
COL13A1-203ENST00000398969 EPB41L3Q9Y2J2 1087 aaPredicted RBP27.08■■□□□ 1.93
COL13A1-203ENST00000398969 NFASCO94856 1347 aa27.08■■□□□ 1.93
COL13A1-203ENST00000398969 EMC2Q15006 297 aa27.07■■□□□ 1.92
COL13A1-203ENST00000398969 ABHD15Q6UXT9 468 aa27.07■■□□□ 1.92
COL13A1-203ENST00000398969 MAML1Q92585 1016 aa27.07■■□□□ 1.92
COL13A1-203ENST00000398969 PARVAQ9NVD7 372 aa27.07■■□□□ 1.92
COL13A1-203ENST00000398969 LIASO43766 372 aa27.07■■□□□ 1.92
COL13A1-203ENST00000398969 LMNB2Q03252 620 aa27.07■■□□□ 1.92
COL13A1-203ENST00000398969 TMED2Q15363 201 aa27.07■■□□□ 1.92
COL13A1-203ENST00000398969 CEP128Q6ZU80 1094 aa27.07■■□□□ 1.92
COL13A1-203ENST00000398969 RIBC1Q8N443 379 aaPredicted RBP27.07■■□□□ 1.92
COL13A1-203ENST00000398969 FITM2Q8N6M3 262 aa27.07■■□□□ 1.92
COL13A1-203ENST00000398969 RXFP1Q9HBX9 757 aa27.07■■□□□ 1.92
COL13A1-203ENST00000398969 RASA4BC9J798 803 aa27.06■■□□□ 1.92
COL13A1-203ENST00000398969 RASA4O43374 803 aa27.06■■□□□ 1.92
COL13A1-203ENST00000398969 IBSPP21815 317 aaPredicted RBP27.06■■□□□ 1.92
COL13A1-203ENST00000398969 ATP13A4Q4VNC1 1196 aa27.06■■□□□ 1.92
COL13A1-203ENST00000398969 ZBTB41Q5SVQ8 909 aa27.06■■□□□ 1.92
COL13A1-203ENST00000398969 ANKRD35Q8N283 1001 aa27.06■■□□□ 1.92
COL13A1-203ENST00000398969 GLIS1Q8NBF1 620 aa27.06■■□□□ 1.92
COL13A1-203ENST00000398969 NSUN6Q8TEA1 469 aaKnown RBP27.06■■□□□ 1.92
COL13A1-203ENST00000398969 ZBTB45Q96K62 511 aaPredicted RBP27.06■■□□□ 1.92
COL13A1-203ENST00000398969 IP6K2Q9UHH9 426 aa27.06■■□□□ 1.92
COL13A1-203ENST00000398969 NUB1Q9Y5A7 615 aa27.06■■□□□ 1.92
COL13A1-203ENST00000398969 PARP14Q460N5 1801 aa27.06■■□□□ 1.92
COL13A1-203ENST00000398969 SSC5DA1L4H1 1573 aa27.06■■□□□ 1.92
COL13A1-203ENST00000398969 PI4K2BG5E9Z4 385 aa27.06■■□□□ 1.92
COL13A1-203ENST00000398969 KRT10P13645 584 aa27.06■■□□□ 1.92
COL13A1-203ENST00000398969 MTFR1Q15390 333 aa27.06■■□□□ 1.92
COL13A1-203ENST00000398969 XKR3Q5GH77 459 aa27.06■■□□□ 1.92
COL13A1-203ENST00000398969 GIMAP7Q8NHV1 300 aa27.06■■□□□ 1.92
COL13A1-203ENST00000398969 RMDN2Q96LZ7 410 aa27.06■■□□□ 1.92
COL13A1-203ENST00000398969 CFAP57Q96MR6 1250 aa27.06■■□□□ 1.92
COL13A1-203ENST00000398969 PNMA3Q9UL41 463 aa27.06■■□□□ 1.92
COL13A1-203ENST00000398969 DNPEPQ9ULA0 475 aa27.06■■□□□ 1.92
COL13A1-203ENST00000398969 IGF2BP3O00425 579 aaKnown RBP eCLIP27.05■■□□□ 1.92
COL13A1-203ENST00000398969 DDNO94850 711 aaPredicted RBP27.05■■□□□ 1.92
COL13A1-203ENST00000398969 TCF4P15884 667 aa27.05■■□□□ 1.92
COL13A1-203ENST00000398969 TAC1P20366 129 aa27.05■■□□□ 1.92
COL13A1-203ENST00000398969 TBXAS1P24557 533 aaPredicted RBP27.05■■□□□ 1.92
COL13A1-203ENST00000398969 FOXN2P32314 431 aa27.05■■□□□ 1.92
COL13A1-203ENST00000398969 CETN2P41208 172 aa27.05■■□□□ 1.92
COL13A1-203ENST00000398969 POLGP54098 1239 aaPredicted RBP27.05■■□□□ 1.92
COL13A1-203ENST00000398969 RPL7AP62424 266 aaKnown RBP27.05■■□□□ 1.92
COL13A1-203ENST00000398969 NOP14P78316 857 aaKnown RBP27.05■■□□□ 1.92
COL13A1-203ENST00000398969 KAZNQ674X7 775 aa27.05■■□□□ 1.92
COL13A1-203ENST00000398969 PPP1R2P3Q6NXS1 205 aa27.05■■□□□ 1.92
COL13A1-203ENST00000398969 RCOR2Q8IZ40 523 aa27.05■■□□□ 1.92
COL13A1-203ENST00000398969 CCHCR1Q8TD31 782 aa27.05■■□□□ 1.92
COL13A1-203ENST00000398969 TMEM143Q96AN5 459 aa27.05■■□□□ 1.92
COL13A1-203ENST00000398969 TBC1D31Q96DN5 1066 aa27.05■■□□□ 1.92
COL13A1-203ENST00000398969 SLITRK1Q96PX8 696 aa27.05■■□□□ 1.92
COL13A1-203ENST00000398969 CXorf56Q9H5V9 222 aa27.05■■□□□ 1.92
COL13A1-203ENST00000398969 SAYSD1Q9NPB0 183 aa27.05■■□□□ 1.92
COL13A1-203ENST00000398969 KCNG1Q9UIX4 513 aa27.05■■□□□ 1.92
COL13A1-203ENST00000398969 POLR2AP24928 1970 aaKnown RBP27.05■■□□□ 1.92
COL13A1-203ENST00000398969 FAM47DPA6NHR8 397 aa27.05■■□□□ 1.92
COL13A1-203ENST00000398969 DNALI1O14645 258 aaPredicted RBP27.05■■□□□ 1.92
COL13A1-203ENST00000398969 GCAP28676 217 aa27.05■■□□□ 1.92
COL13A1-203ENST00000398969 NF2P35240 595 aa27.05■■□□□ 1.92
COL13A1-203ENST00000398969 HMGCS2P54868 508 aa27.05■■□□□ 1.92
COL13A1-203ENST00000398969 SUPT20HL1Q3ZLR7 823 aa27.05■■□□□ 1.92
COL13A1-203ENST00000398969 SNRNP48Q6IEG0 339 aaKnown RBP27.05■■□□□ 1.92
COL13A1-203ENST00000398969 ASAP3Q8TDY4 903 aa27.05■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms