RNA–Protein interactions for RNA: ENST00000398493.5

MBD1-208, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 5 BASIC

Gene MBD1, Length 1,845 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-208ENST00000398493 IL23AQ9NPF7 189 aa19.6■□□□□ 0.73
MBD1-208ENST00000398493 PRMT7Q9NVM4 692 aaPredicted RBP19.6■□□□□ 0.73
MBD1-208ENST00000398493 NOCTQ9UK39 431 aaKnown RBP19.6■□□□□ 0.73
MBD1-208ENST00000398493 LTBP2Q14767 1821 aa19.6■□□□□ 0.73
MBD1-208ENST00000398493 HARSP12081 509 aaKnown RBP19.6■□□□□ 0.73
MBD1-208ENST00000398493 MAGEA10P43363 369 aaPredicted RBP19.6■□□□□ 0.73
MBD1-208ENST00000398493 CDR2Q01850 454 aa19.6■□□□□ 0.73
MBD1-208ENST00000398493 TCEAL1Q15170 157 aa19.6■□□□□ 0.73
MBD1-208ENST00000398493 FAM187BQ17R55 369 aa19.6■□□□□ 0.73
MBD1-208ENST00000398493 LONRF2Q1L5Z9 754 aa19.6■□□□□ 0.73
MBD1-208ENST00000398493 GLE1Q53GS7 698 aaKnown RBP19.6■□□□□ 0.73
MBD1-208ENST00000398493 TDRD10Q5VZ19 366 aaKnown RBP19.6■□□□□ 0.73
MBD1-208ENST00000398493 NOP9Q86U38 636 aaKnown RBP19.6■□□□□ 0.73
MBD1-208ENST00000398493 LINC01599Q8WXQ3 324 aa19.6■□□□□ 0.73
MBD1-208ENST00000398493 KCNK3O14649 394 aa19.59■□□□□ 0.73
MBD1-208ENST00000398493 SEC31AO94979 1220 aaKnown RBP19.59■□□□□ 0.73
MBD1-208ENST00000398493 TBXAS1P24557 533 aaPredicted RBP19.59■□□□□ 0.73
MBD1-208ENST00000398493 HADHBP55084 474 aaKnown RBP19.59■□□□□ 0.73
MBD1-208ENST00000398493 VSNL1P62760 191 aa19.59■□□□□ 0.73
MBD1-208ENST00000398493 MLLT1Q03111 559 aaPredicted RBP19.59■□□□□ 0.73
MBD1-208ENST00000398493 MCL1Q07820 350 aa19.59■□□□□ 0.73
MBD1-208ENST00000398493 TAF3Q5VWG9 929 aa19.59■□□□□ 0.73
MBD1-208ENST00000398493 LMBRD2Q68DH5 695 aaPredicted RBP19.59■□□□□ 0.73
MBD1-208ENST00000398493 ZBTB33Q86T24 672 aa19.59■□□□□ 0.73
MBD1-208ENST00000398493 SLC47A2Q86VL8 602 aa19.59■□□□□ 0.73
MBD1-208ENST00000398493 ZNF677Q86XU0 584 aa19.59■□□□□ 0.73
MBD1-208ENST00000398493 WDR49Q8IV35 697 aa19.59■□□□□ 0.73
MBD1-208ENST00000398493 PI4K2AQ9BTU6 479 aa19.59■□□□□ 0.73
MBD1-208ENST00000398493 IMPG2Q9BZV3 1241 aa19.59■□□□□ 0.73
MBD1-208ENST00000398493 THAP2Q9H0W7 228 aa19.59■□□□□ 0.73
MBD1-208ENST00000398493 TAS2R14Q9NYV8 317 aa19.59■□□□□ 0.73
MBD1-208ENST00000398493 PIN4Q9Y237 131 aaKnown RBP19.59■□□□□ 0.73
MBD1-208ENST00000398493 CNTNAP2Q9UHC6 1331 aa19.58■□□□□ 0.73
MBD1-208ENST00000398493 ERLIN2O94905 339 aa19.58■□□□□ 0.73
MBD1-208ENST00000398493 CHRNB2P17787 502 aa19.58■□□□□ 0.73
MBD1-208ENST00000398493 DNA2P51530 1060 aa19.58■□□□□ 0.73
MBD1-208ENST00000398493 MPZL3Q6UWV2 235 aa19.58■□□□□ 0.73
MBD1-208ENST00000398493 HDXQ7Z353 690 aa19.58■□□□□ 0.73
MBD1-208ENST00000398493 SEPT8Q92599 483 aa19.58■□□□□ 0.73
MBD1-208ENST00000398493 LBHD1Q9BQE6 289 aaPredicted RBP19.58■□□□□ 0.73
MBD1-208ENST00000398493 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.58■□□□□ 0.737e-7■■□□□ 13.3
MBD1-208ENST00000398493 CTTNBP2NLQ9P2B4 639 aa19.58■□□□□ 0.73
MBD1-208ENST00000398493 PACSIN2Q9UNF0 486 aaPredicted RBP19.58■□□□□ 0.73
MBD1-208ENST00000398493 PPIGQ13427 754 aaKnown RBP eCLIP19.58■□□□□ 0.727e-7■■■□□ 17.1
MBD1-208ENST00000398493 DSC3Q14574 896 aa19.58■□□□□ 0.72
MBD1-208ENST00000398493 ATF7IP2Q5U623 682 aa19.58■□□□□ 0.72
MBD1-208ENST00000398493 EEF1DP3Q658K8 133 aa19.58■□□□□ 0.72
MBD1-208ENST00000398493 ZNF365Q70YC5 407 aa19.58■□□□□ 0.72
MBD1-208ENST00000398493 NT5DC3Q86UY8 548 aa19.58■□□□□ 0.72
MBD1-208ENST00000398493 ABCB6Q9NP58 842 aa19.58■□□□□ 0.72
MBD1-208ENST00000398493 STXBP5LQ9Y2K9 1186 aa19.58■□□□□ 0.72
MBD1-208ENST00000398493 PCDHB2Q9Y5E7 798 aa19.58■□□□□ 0.72
MBD1-208ENST00000398493 A0A1B0GUA9 196 aa19.57■□□□□ 0.72
MBD1-208ENST00000398493 MMEP08473 750 aa19.57■□□□□ 0.72
MBD1-208ENST00000398493 FMO1Q01740 532 aa19.57■□□□□ 0.72
MBD1-208ENST00000398493 TMEM240Q5SV17 173 aa19.57■□□□□ 0.72
MBD1-208ENST00000398493 ZBTB41Q5SVQ8 909 aa19.57■□□□□ 0.72
MBD1-208ENST00000398493 BEND6Q5SZJ8 279 aaPredicted RBP19.57■□□□□ 0.72
MBD1-208ENST00000398493 CNKSR3Q6P9H4 555 aa19.57■□□□□ 0.72
MBD1-208ENST00000398493 OTOP2Q7RTS6 562 aa19.57■□□□□ 0.72
MBD1-208ENST00000398493 MS4A14Q96JA4 679 aa19.57■□□□□ 0.72
MBD1-208ENST00000398493 OSGEPQ9NPF4 335 aa19.57■□□□□ 0.72
MBD1-208ENST00000398493 BUB1BO60566 1050 aaPredicted RBP19.56■□□□□ 0.72
MBD1-208ENST00000398493 CLSTN1O94985 981 aa19.56■□□□□ 0.72
MBD1-208ENST00000398493 VNN1O95497 513 aa19.56■□□□□ 0.72
MBD1-208ENST00000398493 PCBP1Q15365 356 aaKnown RBP eCLIP19.56■□□□□ 0.72
MBD1-208ENST00000398493 DUOXA2Q1HG44 320 aa19.56■□□□□ 0.72
MBD1-208ENST00000398493 UBXN11Q5T124 520 aa19.56■□□□□ 0.72
MBD1-208ENST00000398493 SMYD5Q6GMV2 418 aa19.56■□□□□ 0.72
MBD1-208ENST00000398493 PALB2Q86YC2 1186 aa19.56■□□□□ 0.72
MBD1-208ENST00000398493 ACTRT1Q8TDG2 376 aa19.56■□□□□ 0.72
MBD1-208ENST00000398493 PCDHB18PQ96TA0 734 aa19.56■□□□□ 0.72
MBD1-208ENST00000398493 ADAM2Q99965 735 aa19.56■□□□□ 0.72
MBD1-208ENST00000398493 EIF2AQ9BY44 585 aaKnown RBP19.56■□□□□ 0.72
MBD1-208ENST00000398493 PDZD7Q9H5P4 517 aa19.56■□□□□ 0.72
MBD1-208ENST00000398493 PTPRHQ9HD43 1115 aa19.56■□□□□ 0.72
MBD1-208ENST00000398493 RNF216Q9NWF9 866 aaPredicted RBP19.56■□□□□ 0.72
MBD1-208ENST00000398493 TNFSF13BQ9Y275 285 aa19.56■□□□□ 0.72
MBD1-208ENST00000398493 LOC101059915A0A1B0GWI6 518 aaPredicted RBP19.55■□□□□ 0.72
MBD1-208ENST00000398493 ENPP3O14638 875 aa19.55■□□□□ 0.72
MBD1-208ENST00000398493 ABLIM1O14639 778 aa19.55■□□□□ 0.72
MBD1-208ENST00000398493 CEP104O60308 925 aa19.55■□□□□ 0.72
MBD1-208ENST00000398493 TNNC1P63316 161 aa19.55■□□□□ 0.72
MBD1-208ENST00000398493 CUL2Q13617 745 aa19.55■□□□□ 0.72
MBD1-208ENST00000398493 NCOA4Q13772 614 aa19.55■□□□□ 0.72
MBD1-208ENST00000398493 CLUL1Q15846 466 aa19.55■□□□□ 0.72
MBD1-208ENST00000398493 ACAD10Q6JQN1 1059 aa19.55■□□□□ 0.72
MBD1-208ENST00000398493 LIN28BQ6ZN17 250 aaKnown RBP eCLIP19.55■□□□□ 0.72
MBD1-208ENST00000398493 APBB2Q92870 758 aa19.55■□□□□ 0.72
MBD1-208ENST00000398493 ARHGEF26Q96DR7 871 aa19.55■□□□□ 0.72
MBD1-208ENST00000398493 HES6Q96HZ4 224 aa19.55■□□□□ 0.72
MBD1-208ENST00000398493 GDF15Q99988 308 aa19.55■□□□□ 0.72
MBD1-208ENST00000398493 CPSF3Q9UKF6 684 aaKnown RBP19.55■□□□□ 0.72
MBD1-208ENST00000398493 FGBP02675 491 aa19.55■□□□□ 0.72
MBD1-208ENST00000398493 PFKMP08237 780 aa19.55■□□□□ 0.72
MBD1-208ENST00000398493 PROZP22891 400 aa19.55■□□□□ 0.72
MBD1-208ENST00000398493 WNT7BP56706 349 aa19.55■□□□□ 0.72
MBD1-208ENST00000398493 GPS2Q13227 327 aa19.55■□□□□ 0.72
MBD1-208ENST00000398493 ZNF568Q3ZCX4 644 aa19.55■□□□□ 0.72
MBD1-208ENST00000398493 SEZ6Q53EL9 994 aa19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms