RNA–Protein interactions for RNA: ENST00000398145.6

HPS4-202, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS4, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-202ENST00000398145 RNPEPL1Q9HAU8 725 aa11.6□□□□□ -0.55
HPS4-202ENST00000398145 PAK5Q9P286 719 aa11.6□□□□□ -0.55
HPS4-202ENST00000398145 HERC5Q9UII4 1024 aaKnown RBP11.6□□□□□ -0.55
HPS4-202ENST00000398145 GRID1Q9ULK0 1009 aa11.6□□□□□ -0.55
HPS4-202ENST00000398145 PIK3R2O00459 728 aa11.6□□□□□ -0.55
HPS4-202ENST00000398145 APOL1O14791 398 aa11.6□□□□□ -0.55
HPS4-202ENST00000398145 KCNQ2O43526 872 aa11.6□□□□□ -0.55
HPS4-202ENST00000398145 NUDT17P0C025 328 aa11.6□□□□□ -0.55
HPS4-202ENST00000398145 MYL2P10916 166 aa11.6□□□□□ -0.55
HPS4-202ENST00000398145 ZFXP17010 805 aaPredicted RBP11.6□□□□□ -0.55
HPS4-202ENST00000398145 DRG2P55039 364 aaKnown RBP11.6□□□□□ -0.55
HPS4-202ENST00000398145 NFIXQ14938 502 aa11.6□□□□□ -0.55
HPS4-202ENST00000398145 CNGA2Q16280 664 aa11.6□□□□□ -0.55
HPS4-202ENST00000398145 TTC39BQ5VTQ0 682 aaPredicted RBP11.6□□□□□ -0.55
HPS4-202ENST00000398145 EEPD1Q7L9B9 569 aa11.6□□□□□ -0.55
HPS4-202ENST00000398145 CCDC117Q8IWD4 279 aaPredicted RBP11.6□□□□□ -0.55
HPS4-202ENST00000398145 SLC5A5Q92911 643 aa11.6□□□□□ -0.55
HPS4-202ENST00000398145 THAP11Q96EK4 314 aa11.6□□□□□ -0.55
HPS4-202ENST00000398145 MRPL4Q9BYD3 311 aaKnown RBP11.6□□□□□ -0.55
HPS4-202ENST00000398145 SHBGP04278 402 aa11.6□□□□□ -0.55
HPS4-202ENST00000398145 COPAP53621 1224 aa11.6□□□□□ -0.55
HPS4-202ENST00000398145 KCNJ2P63252 427 aa11.6□□□□□ -0.55
HPS4-202ENST00000398145 TRADDQ15628 312 aa11.6□□□□□ -0.55
HPS4-202ENST00000398145 SMAD1Q15797 465 aaKnown RBP11.6□□□□□ -0.55
HPS4-202ENST00000398145 ARMCX2Q7L311 632 aa11.6□□□□□ -0.55
HPS4-202ENST00000398145 SCUBE1Q8IWY4 988 aa11.6□□□□□ -0.55
HPS4-202ENST00000398145 TMEM237Q96Q45 408 aa11.6□□□□□ -0.55
HPS4-202ENST00000398145 CBWD1Q9BRT8 395 aa11.6□□□□□ -0.55
HPS4-202ENST00000398145 FRMD8Q9BZ67 464 aaPredicted RBP11.6□□□□□ -0.55
HPS4-202ENST00000398145 CCDC134Q9H6E4 229 aa11.6□□□□□ -0.55
HPS4-202ENST00000398145 CSADQ9Y600 493 aa11.6□□□□□ -0.55
HPS4-202ENST00000398145 BTNL10A8MVZ5 291 aa11.59□□□□□ -0.55
HPS4-202ENST00000398145 F5H423 210 aaPredicted RBP11.59□□□□□ -0.55
HPS4-202ENST00000398145 WNT7AO00755 349 aa11.59□□□□□ -0.55
HPS4-202ENST00000398145 ZNF263O14978 683 aa11.59□□□□□ -0.55
HPS4-202ENST00000398145 ATP9AO75110 1047 aa11.59□□□□□ -0.55
HPS4-202ENST00000398145 CACNA2D1P54289 1103 aa11.59□□□□□ -0.55
HPS4-202ENST00000398145 PSMC6P62333 389 aa11.59□□□□□ -0.55
HPS4-202ENST00000398145 FAM47CQ5HY64 1035 aa11.59□□□□□ -0.55
HPS4-202ENST00000398145 GLIS3Q8NEA6 775 aa11.59□□□□□ -0.55
HPS4-202ENST00000398145 A1CFQ9NQ94 594 aaKnown RBP11.59□□□□□ -0.55
HPS4-202ENST00000398145 LRRC4BQ9NT99 713 aa11.59□□□□□ -0.55
HPS4-202ENST00000398145 RNF146Q9NTX7 359 aa11.59□□□□□ -0.55
HPS4-202ENST00000398145 ENO3P13929 434 aaPredicted RBP11.59□□□□□ -0.55
HPS4-202ENST00000398145 EPHB2P29323 1055 aa11.59□□□□□ -0.55
HPS4-202ENST00000398145 XRCC4Q13426 336 aa11.59□□□□□ -0.55
HPS4-202ENST00000398145 AUHQ13825 339 aaKnown RBP11.59□□□□□ -0.55
HPS4-202ENST00000398145 MYBPC2Q14324 1141 aa11.59□□□□□ -0.55
HPS4-202ENST00000398145 CKAP2Q8WWK9 683 aa11.59□□□□□ -0.55
HPS4-202ENST00000398145 ATP6V1E2Q96A05 226 aa11.59□□□□□ -0.55
HPS4-202ENST00000398145 NACA2Q9H009 215 aa11.59□□□□□ -0.55
HPS4-202ENST00000398145 RSAD1Q9HA92 442 aa11.59□□□□□ -0.55
HPS4-202ENST00000398145 SUN2Q9UH99 717 aa11.59□□□□□ -0.55
HPS4-202ENST00000398145 NUB1Q9Y5A7 615 aa11.59□□□□□ -0.55
HPS4-202ENST00000398145 AIM2O14862 343 aa11.59□□□□□ -0.55
HPS4-202ENST00000398145 PDGFRAP16234 1089 aa11.59□□□□□ -0.55
HPS4-202ENST00000398145 WDR72Q3MJ13 1102 aa11.59□□□□□ -0.55
HPS4-202ENST00000398145 ARL13BQ3SXY8 428 aa11.59□□□□□ -0.55
HPS4-202ENST00000398145 C2CD6Q53TS8 623 aa11.59□□□□□ -0.55
HPS4-202ENST00000398145 EAPPQ56P03 285 aaPredicted RBP11.59□□□□□ -0.55
HPS4-202ENST00000398145 OLFML2BQ68BL8 750 aa11.59□□□□□ -0.55
HPS4-202ENST00000398145 CBWD2Q8IUF1 395 aa11.59□□□□□ -0.55
HPS4-202ENST00000398145 FAM167AQ96KS9 214 aa11.59□□□□□ -0.55
HPS4-202ENST00000398145 INPP5FQ9Y2H2 1132 aa11.59□□□□□ -0.55
HPS4-202ENST00000398145 PCDHA3Q9Y5H8 950 aa11.59□□□□□ -0.55
HPS4-202ENST00000398145 PROSCO94903 275 aa11.58□□□□□ -0.55
HPS4-202ENST00000398145 SREBF1P36956 1147 aa11.58□□□□□ -0.55
HPS4-202ENST00000398145 KCTD2Q14681 263 aa11.58□□□□□ -0.55
HPS4-202ENST00000398145 RASA2Q15283 850 aa11.58□□□□□ -0.55
HPS4-202ENST00000398145 MAPRE2Q15555 327 aa11.58□□□□□ -0.55
HPS4-202ENST00000398145 SMTNL2Q2TAL5 461 aa11.58□□□□□ -0.55
HPS4-202ENST00000398145 TRMT5Q32P41 509 aaKnown RBP11.58□□□□□ -0.55
HPS4-202ENST00000398145 RYBPQ8N488 228 aaPredicted RBP11.58□□□□□ -0.55
HPS4-202ENST00000398145 FAM71DQ8N9W8 422 aa11.58□□□□□ -0.55
HPS4-202ENST00000398145 EXD1Q8NHP7 514 aa11.58□□□□□ -0.55
HPS4-202ENST00000398145 MTMR9Q96QG7 549 aa11.58□□□□□ -0.55
HPS4-202ENST00000398145 PAFAH2Q99487 392 aa11.58□□□□□ -0.55
HPS4-202ENST00000398145 STK32BQ9NY57 414 aa11.58□□□□□ -0.55
HPS4-202ENST00000398145 ZBBXA8MT70 800 aa11.58□□□□□ -0.56
HPS4-202ENST00000398145 UNC5CO95185 931 aa11.58□□□□□ -0.56
HPS4-202ENST00000398145 CHEK2O96017 543 aa11.58□□□□□ -0.56
HPS4-202ENST00000398145 ATP6V1B1P15313 513 aa11.58□□□□□ -0.56
HPS4-202ENST00000398145 FECHP22830 423 aa11.58□□□□□ -0.56
HPS4-202ENST00000398145 CDC25CP30307 473 aa11.58□□□□□ -0.56
HPS4-202ENST00000398145 STIP1P31948 543 aaKnown RBP11.58□□□□□ -0.56
HPS4-202ENST00000398145 SLC34A1Q06495 639 aa11.58□□□□□ -0.56
HPS4-202ENST00000398145 LAMB3Q13751 1172 aa11.58□□□□□ -0.56
HPS4-202ENST00000398145 MTFR1Q15390 333 aa11.58□□□□□ -0.56
HPS4-202ENST00000398145 STXBP2Q15833 593 aa11.58□□□□□ -0.56
HPS4-202ENST00000398145 PCNX4Q63HM2 1172 aa11.58□□□□□ -0.56
HPS4-202ENST00000398145 SLC47A2Q86VL8 602 aa11.58□□□□□ -0.56
HPS4-202ENST00000398145 TTC39CQ8N584 583 aa11.58□□□□□ -0.56
HPS4-202ENST00000398145 SCG3Q8WXD2 468 aaKnown RBP11.58□□□□□ -0.56
HPS4-202ENST00000398145 ATXN7L3BQ96GX2 97 aa11.58□□□□□ -0.56
HPS4-202ENST00000398145 ZNF302Q9NR11 478 aa11.58□□□□□ -0.56
HPS4-202ENST00000398145 METTL5Q9NRN9 209 aaKnown RBP11.58□□□□□ -0.56
HPS4-202ENST00000398145 M0QZ92 97 aa11.58□□□□□ -0.56
HPS4-202ENST00000398145 TM9SF1O15321 606 aa11.58□□□□□ -0.56
HPS4-202ENST00000398145 CBX6O95503 412 aa11.58□□□□□ -0.56
HPS4-202ENST00000398145 MROH9Q5TGP6 573 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms