RNA–Protein interactions for RNA: ENST00000398035.6

COLCA2-201, Transcript of colorectal cancer associated 2, humanhuman

TSL 1 (best) BASIC

Gene COLCA2, Length 1,414 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2-201ENST00000398035 BORCS6Q96GS4 357 aa20.27■□□□□ 0.83
COLCA2-201ENST00000398035 GDAP2Q9NXN4 497 aa20.27■□□□□ 0.83
COLCA2-201ENST00000398035 AFF4Q9UHB7 1163 aaKnown RBP20.27■□□□□ 0.83
COLCA2-201ENST00000398035 MAPK8IP1Q9UQF2 711 aa20.27■□□□□ 0.83
COLCA2-201ENST00000398035 TIMM13Q9Y5L4 95 aaPredicted RBP20.27■□□□□ 0.83
COLCA2-201ENST00000398035 LOC730098B7Z3J9 87 aa20.26■□□□□ 0.83
COLCA2-201ENST00000398035 ARPP19P56211 112 aa20.26■□□□□ 0.83
COLCA2-201ENST00000398035 SMARCB1Q12824 385 aa20.26■□□□□ 0.83
COLCA2-201ENST00000398035 ADAM9Q13443 819 aa20.26■□□□□ 0.83
COLCA2-201ENST00000398035 TRAPPC11Q7Z392 1133 aa20.26■□□□□ 0.83
COLCA2-201ENST00000398035 TCEAL8Q8IYN2 117 aa20.26■□□□□ 0.83
COLCA2-201ENST00000398035 TMEM86AQ8N2M4 240 aa20.26■□□□□ 0.83
COLCA2-201ENST00000398035 PLCD3Q8N3E9 789 aa20.26■□□□□ 0.83
COLCA2-201ENST00000398035 CXorf38Q8TB03 319 aa20.26■□□□□ 0.83
COLCA2-201ENST00000398035 PARD3BQ8TEW8 1205 aa20.26■□□□□ 0.83
COLCA2-201ENST00000398035 SMG7Q92540 1137 aaKnown RBP20.26■□□□□ 0.83
COLCA2-201ENST00000398035 RPGRIP1Q96KN7 1286 aa20.26■□□□□ 0.83
COLCA2-201ENST00000398035 IKBKBO14920 756 aa20.25■□□□□ 0.83
COLCA2-201ENST00000398035 RFPL2O75678 378 aa20.25■□□□□ 0.83
COLCA2-201ENST00000398035 CPB1P15086 417 aa20.25■□□□□ 0.83
COLCA2-201ENST00000398035 NR2F2P24468 414 aa20.25■□□□□ 0.83
COLCA2-201ENST00000398035 CLDN10P78369 228 aa20.25■□□□□ 0.83
COLCA2-201ENST00000398035 ENPEPQ07075 957 aa20.25■□□□□ 0.83
COLCA2-201ENST00000398035 GPR17Q13304 367 aa20.25■□□□□ 0.83
COLCA2-201ENST00000398035 OTOP3Q7RTS5 596 aa20.25■□□□□ 0.83
COLCA2-201ENST00000398035 TMEM130Q8N3G9 435 aa20.25■□□□□ 0.83
COLCA2-201ENST00000398035 OR5B17Q8NGF7 314 aa20.25■□□□□ 0.83
COLCA2-201ENST00000398035 TMC2Q8TDI7 906 aa20.25■□□□□ 0.83
COLCA2-201ENST00000398035 ACSF2Q96CM8 615 aaPredicted RBP20.25■□□□□ 0.83
COLCA2-201ENST00000398035 HPDLQ96IR7 371 aa20.25■□□□□ 0.83
COLCA2-201ENST00000398035 TSG101Q99816 390 aa20.25■□□□□ 0.83
COLCA2-201ENST00000398035 POMKQ9H5K3 350 aa20.25■□□□□ 0.83
COLCA2-201ENST00000398035 WDR6Q9NNW5 1121 aaKnown RBP20.25■□□□□ 0.83
COLCA2-201ENST00000398035 WDR27A2RRH5 827 aa20.24■□□□□ 0.83
COLCA2-201ENST00000398035 PRRG1O14668 218 aa20.24■□□□□ 0.83
COLCA2-201ENST00000398035 FAM163BP0C2L3 166 aa20.24■□□□□ 0.83
COLCA2-201ENST00000398035 ALADP13716 330 aa20.24■□□□□ 0.83
COLCA2-201ENST00000398035 PSMC2P35998 433 aaKnown RBP20.24■□□□□ 0.83
COLCA2-201ENST00000398035 PRCPP42785 496 aa20.24■□□□□ 0.83
COLCA2-201ENST00000398035 TRPC3Q13507 836 aa20.24■□□□□ 0.83
COLCA2-201ENST00000398035 CEP135Q66GS9 1140 aa20.24■□□□□ 0.83
COLCA2-201ENST00000398035 LMBRD2Q68DH5 695 aaPredicted RBP20.24■□□□□ 0.83
COLCA2-201ENST00000398035 INTS8Q75QN2 995 aaKnown RBP20.24■□□□□ 0.83
COLCA2-201ENST00000398035 SLC7A14Q8TBB6 771 aa20.24■□□□□ 0.83
COLCA2-201ENST00000398035 ZNF707Q96C28 371 aaPredicted RBP20.24■□□□□ 0.83
COLCA2-201ENST00000398035 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP20.24■□□□□ 0.83
COLCA2-201ENST00000398035 HSFX1Q9UBD0 423 aa20.24■□□□□ 0.83
COLCA2-201ENST00000398035 SIX4Q9UIU6 781 aa20.24■□□□□ 0.83
COLCA2-201ENST00000398035 CETN3O15182 167 aa20.23■□□□□ 0.83
COLCA2-201ENST00000398035 PHACTR2O75167 634 aa20.23■□□□□ 0.83
COLCA2-201ENST00000398035 WEE2P0C1S8 567 aa20.23■□□□□ 0.83
COLCA2-201ENST00000398035 ATICP31939 592 aa20.23■□□□□ 0.83
COLCA2-201ENST00000398035 LHX1P48742 406 aa20.23■□□□□ 0.83
COLCA2-201ENST00000398035 ADCY1Q08828 1119 aa20.23■□□□□ 0.83
COLCA2-201ENST00000398035 BFSP1Q12934 665 aa20.23■□□□□ 0.83
COLCA2-201ENST00000398035 CENPPQ6IPU0 288 aa20.23■□□□□ 0.83
COLCA2-201ENST00000398035 TOP6BLQ8N6T0 577 aa20.23■□□□□ 0.83
COLCA2-201ENST00000398035 DHTKD1Q96HY7 919 aaPredicted RBP20.23■□□□□ 0.83
COLCA2-201ENST00000398035 GBP4Q96PP9 640 aa20.23■□□□□ 0.83
COLCA2-201ENST00000398035 CYP4F11Q9HBI6 524 aa20.23■□□□□ 0.83
COLCA2-201ENST00000398035 PSMA7O14818 248 aa20.22■□□□□ 0.83
COLCA2-201ENST00000398035 LRG1P02750 347 aa20.22■□□□□ 0.83
COLCA2-201ENST00000398035 KRT13P13646 458 aa20.22■□□□□ 0.83
COLCA2-201ENST00000398035 FKBP3Q00688 224 aaKnown RBP20.22■□□□□ 0.83
COLCA2-201ENST00000398035 LRRC63Q05C16 580 aa20.22■□□□□ 0.83
COLCA2-201ENST00000398035 ZCWPW2Q504Y3 356 aa20.22■□□□□ 0.83
COLCA2-201ENST00000398035 WSCD1Q658N2 575 aa20.22■□□□□ 0.83
COLCA2-201ENST00000398035 SMYD4Q8IYR2 804 aaPredicted RBP20.22■□□□□ 0.83
COLCA2-201ENST00000398035 DCP1BQ8IZD4 617 aaKnown RBP20.22■□□□□ 0.83
COLCA2-201ENST00000398035 ADSSL1Q8N142 457 aa20.22■□□□□ 0.83
COLCA2-201ENST00000398035 ELMOD1Q8N336 334 aa20.22■□□□□ 0.83
COLCA2-201ENST00000398035 C2orf15Q8WU43 125 aaKnown RBP20.22■□□□□ 0.83
COLCA2-201ENST00000398035 MKNK1Q9BUB5 465 aa20.22■□□□□ 0.83
COLCA2-201ENST00000398035 CD320Q9NPF0 282 aa20.22■□□□□ 0.83
COLCA2-201ENST00000398035 SNX9Q9Y5X1 595 aa20.22■□□□□ 0.83
COLCA2-201ENST00000398035 REV3LO60673 3130 aa20.22■□□□□ 0.83
COLCA2-201ENST00000398035 PTPRJQ12913 1337 aa20.22■□□□□ 0.83
COLCA2-201ENST00000398035 CITO14578 2027 aa20.21■□□□□ 0.83
COLCA2-201ENST00000398035 STAU1O95793 577 aaKnown RBP20.21■□□□□ 0.83
COLCA2-201ENST00000398035 CST3P01034 146 aaPredicted RBP20.21■□□□□ 0.83
COLCA2-201ENST00000398035 CASP4P49662 377 aa20.21■□□□□ 0.83
COLCA2-201ENST00000398035 VAMP7P51809 220 aa20.21■□□□□ 0.83
COLCA2-201ENST00000398035 PLD1Q13393 1074 aa20.21■□□□□ 0.83
COLCA2-201ENST00000398035 ZDHHC14Q8IZN3 488 aa20.21■□□□□ 0.83
COLCA2-201ENST00000398035 TRIML1Q8N9V2 468 aa20.21■□□□□ 0.83
COLCA2-201ENST00000398035 TDRD5Q8NAT2 981 aaKnown RBP20.21■□□□□ 0.83
COLCA2-201ENST00000398035 SYAP1Q96A49 352 aaPredicted RBP20.21■□□□□ 0.83
COLCA2-201ENST00000398035 ACBD6Q9BR61 282 aa20.21■□□□□ 0.83
COLCA2-201ENST00000398035 TSHZ2Q9NRE2 1034 aa20.21■□□□□ 0.83
COLCA2-201ENST00000398035 ZFP37Q9Y6Q3 630 aaPredicted RBP20.21■□□□□ 0.83
COLCA2-201ENST00000398035 TTC28Q96AY4 2481 aa20.21■□□□□ 0.83
COLCA2-201ENST00000398035 GOLGA6L22H0YM25 854 aa20.2■□□□□ 0.82
COLCA2-201ENST00000398035 TUFMP49411 452 aaKnown RBP20.2■□□□□ 0.82
COLCA2-201ENST00000398035 MYL7Q01449 175 aa20.2■□□□□ 0.82
COLCA2-201ENST00000398035 TSPY1Q01534 308 aa20.2■□□□□ 0.82
COLCA2-201ENST00000398035 BIRC3Q13489 604 aa20.2■□□□□ 0.82
COLCA2-201ENST00000398035 RNF19BQ6ZMZ0 732 aa20.2■□□□□ 0.82
COLCA2-201ENST00000398035 RNF135Q8IUD6 432 aa20.2■□□□□ 0.82
COLCA2-201ENST00000398035 FAM186BQ8IYM0 893 aa20.2■□□□□ 0.82
COLCA2-201ENST00000398035 PDCL2Q8N4E4 241 aa20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms