RNA–Protein interactions for RNA: ENST00000397386.7

LMCD1-202, Transcript of LIM and cysteine rich domains 1, humanhuman

TSL 2 BASIC

Gene LMCD1, Length 1,501 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-202ENST00000397386 SPA17Q15506 151 aa13.54□□□□□ -0.24
LMCD1-202ENST00000397386 C10orf76Q5T2E6 689 aa13.54□□□□□ -0.24
LMCD1-202ENST00000397386 DCLRE1AQ6PJP8 1040 aa13.54□□□□□ -0.24
LMCD1-202ENST00000397386 TOGARAM2Q6ZUX3 1019 aa13.54□□□□□ -0.24
LMCD1-202ENST00000397386 SLC47A2Q86VL8 602 aa13.54□□□□□ -0.24
LMCD1-202ENST00000397386 TMEM130Q8N3G9 435 aa13.54□□□□□ -0.24
LMCD1-202ENST00000397386 TOP6BLQ8N6T0 577 aa13.54□□□□□ -0.24
LMCD1-202ENST00000397386 RBBP8NLQ8NC74 664 aaPredicted RBP13.54□□□□□ -0.24
LMCD1-202ENST00000397386 CASD1Q96PB1 797 aa13.54□□□□□ -0.24
LMCD1-202ENST00000397386 MMS19Q96T76 1030 aa13.54□□□□□ -0.24
LMCD1-202ENST00000397386 LUC7LQ9NQ29 371 aaKnown RBP13.54□□□□□ -0.24
LMCD1-202ENST00000397386 TBC1D13Q9NVG8 400 aa13.54□□□□□ -0.24
LMCD1-202ENST00000397386 ADAMTS1Q9UHI8 967 aa13.54□□□□□ -0.24
LMCD1-202ENST00000397386 BARX2Q9UMQ3 279 aaPredicted RBP13.54□□□□□ -0.24
LMCD1-202ENST00000397386 POLIQ9UNA4 740 aa13.54□□□□□ -0.24
LMCD1-202ENST00000397386 INPP5FQ9Y2H2 1132 aa13.54□□□□□ -0.24
LMCD1-202ENST00000397386 SNX9Q9Y5X1 595 aa13.54□□□□□ -0.24
LMCD1-202ENST00000397386 ATP8B3O60423 1300 aa13.54□□□□□ -0.24
LMCD1-202ENST00000397386 LTBP2Q14767 1821 aa13.54□□□□□ -0.24
LMCD1-202ENST00000397386 TDRD15B5MCY1 1934 aaKnown RBP13.54□□□□□ -0.24
LMCD1-202ENST00000397386 GOLGA6L9A6NEM1 432 aa13.54□□□□□ -0.24
LMCD1-202ENST00000397386 TMEM189-UBE2V1I3L0A0 370 aa13.54□□□□□ -0.24
LMCD1-202ENST00000397386 CILPO75339 1184 aa13.54□□□□□ -0.24
LMCD1-202ENST00000397386 CLCNKBP51801 687 aa13.54□□□□□ -0.24
LMCD1-202ENST00000397386 CDR2Q01850 454 aa13.54□□□□□ -0.24
LMCD1-202ENST00000397386 ZNF662Q6ZS27 426 aa13.54□□□□□ -0.24
LMCD1-202ENST00000397386 UNC93AQ86WB7 457 aa13.54□□□□□ -0.24
LMCD1-202ENST00000397386 CCAR2Q8N163 923 aaKnown RBP13.54□□□□□ -0.24
LMCD1-202ENST00000397386 TXLNBQ8N3L3 684 aa13.54□□□□□ -0.24
LMCD1-202ENST00000397386 APPL2Q8NEU8 664 aa13.54□□□□□ -0.24
LMCD1-202ENST00000397386 SLC30A5Q8TAD4 765 aa13.54□□□□□ -0.24
LMCD1-202ENST00000397386 SPATA18Q8TC71 538 aa13.54□□□□□ -0.24
LMCD1-202ENST00000397386 AGPAT1Q99943 283 aa13.54□□□□□ -0.24
LMCD1-202ENST00000397386 DNAI2Q9GZS0 605 aa13.54□□□□□ -0.24
LMCD1-202ENST00000397386 SMYD3Q9H7B4 428 aa13.54□□□□□ -0.24
LMCD1-202ENST00000397386 PPP2R2CQ9Y2T4 447 aa13.54□□□□□ -0.24
LMCD1-202ENST00000397386 A0A087X0T9 212 aa13.53□□□□□ -0.24
LMCD1-202ENST00000397386 ARHGEF37A1IGU5 675 aa13.53□□□□□ -0.24
LMCD1-202ENST00000397386 CASTOR2A6NHX0 329 aa13.53□□□□□ -0.24
LMCD1-202ENST00000397386 SPTLC1O15269 473 aa13.53□□□□□ -0.24
LMCD1-202ENST00000397386 ZNF500O60304 480 aaPredicted RBP13.53□□□□□ -0.24
LMCD1-202ENST00000397386 HUS1O60921 280 aa13.53□□□□□ -0.24
LMCD1-202ENST00000397386 AMHP03971 560 aa13.53□□□□□ -0.24
LMCD1-202ENST00000397386 FAM228BP0C875 321 aa13.53□□□□□ -0.24
LMCD1-202ENST00000397386 GZMAP12544 262 aa13.53□□□□□ -0.24
LMCD1-202ENST00000397386 CD58P19256 250 aa13.53□□□□□ -0.24
LMCD1-202ENST00000397386 TNFAIP3P21580 790 aa13.53□□□□□ -0.24
LMCD1-202ENST00000397386 IBSPP21815 317 aaPredicted RBP13.53□□□□□ -0.24
LMCD1-202ENST00000397386 RNASELQ05823 741 aaKnown RBP13.53□□□□□ -0.24
LMCD1-202ENST00000397386 SOWAHAQ2M3V2 549 aa13.53□□□□□ -0.24
LMCD1-202ENST00000397386 SCARA5Q6ZMJ2 495 aa13.53□□□□□ -0.24
LMCD1-202ENST00000397386 NOP9Q86U38 636 aaKnown RBP13.53□□□□□ -0.24
LMCD1-202ENST00000397386 COLGALT2Q8IYK4 626 aa13.53□□□□□ -0.24
LMCD1-202ENST00000397386 TMEM86AQ8N2M4 240 aa13.53□□□□□ -0.24
LMCD1-202ENST00000397386 OLIG1Q8TAK6 271 aa13.53□□□□□ -0.24
LMCD1-202ENST00000397386 DDX1Q92499 740 aaKnown RBP13.53□□□□□ -0.24
LMCD1-202ENST00000397386 TOP1MTQ969P6 601 aa13.53□□□□□ -0.24
LMCD1-202ENST00000397386 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.53□□□□□ -0.24
LMCD1-202ENST00000397386 SDCBP2Q9H190 292 aa13.53□□□□□ -0.24
LMCD1-202ENST00000397386 NAGPAQ9UK23 515 aa13.53□□□□□ -0.24
LMCD1-202ENST00000397386 KIAA1257Q9ULG3 409 aa13.53□□□□□ -0.24
LMCD1-202ENST00000397386 ALPK3Q96L96 1907 aa13.52□□□□□ -0.24
LMCD1-202ENST00000397386 DDX3XO00571 662 aaKnown RBP eCLIP13.52□□□□□ -0.25
LMCD1-202ENST00000397386 ZNF263O14978 683 aa13.52□□□□□ -0.25
LMCD1-202ENST00000397386 DGKIO75912 1065 aa13.52□□□□□ -0.25
LMCD1-202ENST00000397386 B3GAT3O94766 335 aa13.52□□□□□ -0.25
LMCD1-202ENST00000397386 GNA15P30679 374 aa13.52□□□□□ -0.25
LMCD1-202ENST00000397386 CDH8P55286 799 aa13.52□□□□□ -0.25
LMCD1-202ENST00000397386 FPGSQ05932 587 aa13.52□□□□□ -0.25
LMCD1-202ENST00000397386 GFPT1Q06210 699 aaPredicted RBP13.52□□□□□ -0.25
LMCD1-202ENST00000397386 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.52□□□□□ -0.25
LMCD1-202ENST00000397386 GLYCTKQ8IVS8 523 aa13.52□□□□□ -0.25
LMCD1-202ENST00000397386 WHAMMQ8TF30 809 aa13.52□□□□□ -0.25
LMCD1-202ENST00000397386 TMEM176AQ96HP8 235 aa13.52□□□□□ -0.25
LMCD1-202ENST00000397386 FAM193BQ96PV7 902 aaPredicted RBP13.52□□□□□ -0.25
LMCD1-202ENST00000397386 DESI2Q9BSY9 194 aa13.52□□□□□ -0.25
LMCD1-202ENST00000397386 NT5C1AQ9BXI3 368 aa13.52□□□□□ -0.25
LMCD1-202ENST00000397386 SPTLC3Q9NUV7 552 aa13.52□□□□□ -0.25
LMCD1-202ENST00000397386 NENFQ9UMX5 172 aa13.52□□□□□ -0.25
LMCD1-202ENST00000397386 REXO2Q9Y3B8 237 aaKnown RBP13.52□□□□□ -0.25
LMCD1-202ENST00000397386 CARNS1A5YM72 827 aa13.51□□□□□ -0.25
LMCD1-202ENST00000397386 M0QZQ0 153 aa13.51□□□□□ -0.25
LMCD1-202ENST00000397386 CYB561D2O14569 222 aa13.51□□□□□ -0.25
LMCD1-202ENST00000397386 DDHD2O94830 711 aa13.51□□□□□ -0.25
LMCD1-202ENST00000397386 CHRNB2P17787 502 aa13.51□□□□□ -0.25
LMCD1-202ENST00000397386 WARSP23381 471 aaKnown RBP13.51□□□□□ -0.25
LMCD1-202ENST00000397386 RAP1GAPP47736 663 aa13.51□□□□□ -0.25
LMCD1-202ENST00000397386 RAD23BP54727 409 aa13.51□□□□□ -0.25
LMCD1-202ENST00000397386 FMO1Q01740 532 aa13.51□□□□□ -0.25
LMCD1-202ENST00000397386 PPP1R2P3Q6NXS1 205 aa13.51□□□□□ -0.25
LMCD1-202ENST00000397386 ALKBH5Q6P6C2 394 aaKnown RBP13.51□□□□□ -0.25
LMCD1-202ENST00000397386 TRIM72Q6ZMU5 477 aa13.51□□□□□ -0.25
LMCD1-202ENST00000397386 ZNF280BQ86YH2 543 aa13.51□□□□□ -0.25
LMCD1-202ENST00000397386 GPIHBP1Q8IV16 184 aa13.51□□□□□ -0.25
LMCD1-202ENST00000397386 LRRC43Q8N309 656 aa13.51□□□□□ -0.25
LMCD1-202ENST00000397386 C3orf58Q8NDZ4 430 aa13.51□□□□□ -0.25
LMCD1-202ENST00000397386 ACRBPQ8NEB7 543 aa13.51□□□□□ -0.25
LMCD1-202ENST00000397386 SLC20A1Q8WUM9 679 aa13.51□□□□□ -0.25
LMCD1-202ENST00000397386 KBTBD7Q8WVZ9 684 aa13.51□□□□□ -0.25
LMCD1-202ENST00000397386 ZNF606Q8WXB4 792 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms