RNA–Protein interactions for RNA: ENST00000397149.3

SMU1-201, Transcript of SMU1, DNA replication regulator and spliceosomal factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMU1, Length 7,122 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMU1-201ENST00000397149 STIP1P31948 543 aaKnown RBP12.87□□□□□ -0.35
SMU1-201ENST00000397149 ARL3P36405 182 aa12.87□□□□□ -0.35
SMU1-201ENST00000397149 MTHFD1LQ6UB35 978 aa12.87□□□□□ -0.35
SMU1-201ENST00000397149 KLF6Q99612 283 aaPredicted RBP12.87□□□□□ -0.35
SMU1-201ENST00000397149 TRABDQ9H4I3 376 aa12.87□□□□□ -0.35
SMU1-201ENST00000397149 VTA1Q9NP79 307 aa12.87□□□□□ -0.35
SMU1-201ENST00000397149 DBR1Q9UK59 544 aaKnown RBP12.87□□□□□ -0.35
SMU1-201ENST00000397149 CHMP2BQ9UQN3 213 aa12.87□□□□□ -0.35
SMU1-201ENST00000397149 KLHL20Q9Y2M5 609 aa12.87□□□□□ -0.35
SMU1-201ENST00000397149 LOC102724159A0A0B4J2E5 919 aa12.87□□□□□ -0.35
SMU1-201ENST00000397149 FAM196BA6NMK8 535 aa12.87□□□□□ -0.35
SMU1-201ENST00000397149 ZNF500O60304 480 aaPredicted RBP12.87□□□□□ -0.35
SMU1-201ENST00000397149 RBMXL2O75526 392 aaKnown RBP12.87□□□□□ -0.35
SMU1-201ENST00000397149 SRP54P61011 504 aaKnown RBP12.87□□□□□ -0.35
SMU1-201ENST00000397149 CAV1Q03135 178 aa12.87□□□□□ -0.35
SMU1-201ENST00000397149 SCRN3Q0VDG4 424 aa12.87□□□□□ -0.35
SMU1-201ENST00000397149 PWP2Q15269 919 aaKnown RBP12.87□□□□□ -0.35
SMU1-201ENST00000397149 TCEA2Q15560 299 aa12.87□□□□□ -0.35
SMU1-201ENST00000397149 MAPK11Q15759 364 aa12.87□□□□□ -0.35
SMU1-201ENST00000397149 WLSQ5T9L3 541 aa12.87□□□□□ -0.35
SMU1-201ENST00000397149 SLC13A5Q86YT5 568 aaPredicted RBP12.87□□□□□ -0.35
SMU1-201ENST00000397149 CENPLQ8N0S6 344 aaPredicted RBP12.87□□□□□ -0.35
SMU1-201ENST00000397149 FLAD1Q8NFF5 587 aa12.87□□□□□ -0.35
SMU1-201ENST00000397149 SLC4A9Q96Q91 983 aa12.87□□□□□ -0.35
SMU1-201ENST00000397149 RAB6BQ9NRW1 208 aa12.87□□□□□ -0.35
SMU1-201ENST00000397149 TNRQ92752 1358 aa12.87□□□□□ -0.35
SMU1-201ENST00000397149 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.87□□□□□ -0.35
SMU1-201ENST00000397149 ZNF23P17027 643 aa12.87□□□□□ -0.35
SMU1-201ENST00000397149 MMRN1Q13201 1228 aa12.87□□□□□ -0.35
SMU1-201ENST00000397149 TTLL4Q14679 1199 aa12.87□□□□□ -0.35
SMU1-201ENST00000397149 TSPAN17Q96FV3 270 aa12.87□□□□□ -0.35
SMU1-201ENST00000397149 PHACTR1Q9C0D0 580 aa12.87□□□□□ -0.35
SMU1-201ENST00000397149 C14orf93Q9H972 538 aaKnown RBP12.87□□□□□ -0.35
SMU1-201ENST00000397149 POTEMA6NI47 508 aa12.87□□□□□ -0.35
SMU1-201ENST00000397149 TRIM24O15164 1050 aa12.87□□□□□ -0.35
SMU1-201ENST00000397149 CIAPIN1Q6FI81 312 aa12.87□□□□□ -0.35
SMU1-201ENST00000397149 APLFQ8IW19 511 aaPredicted RBP12.87□□□□□ -0.35
SMU1-201ENST00000397149 XXYLT1Q8NBI6 393 aa12.87□□□□□ -0.35
SMU1-201ENST00000397149 SPATA18Q8TC71 538 aa12.87□□□□□ -0.35
SMU1-201ENST00000397149 BTBD9Q96Q07 612 aa12.87□□□□□ -0.35
SMU1-201ENST00000397149 RHOBTB2Q9BYZ6 727 aa12.87□□□□□ -0.35
SMU1-201ENST00000397149 IL1RAPL1Q9NZN1 696 aa12.87□□□□□ -0.35
SMU1-201ENST00000397149 LIMA1Q9UHB6 759 aaKnown RBP12.87□□□□□ -0.35
SMU1-201ENST00000397149 CARMIL3Q8ND23 1372 aa12.86□□□□□ -0.35
SMU1-201ENST00000397149 CCDC188H7C350 402 aa12.86□□□□□ -0.35
SMU1-201ENST00000397149 STXBP3O00186 592 aa12.86□□□□□ -0.35
SMU1-201ENST00000397149 TCEA3O75764 348 aa12.86□□□□□ -0.35
SMU1-201ENST00000397149 NR3C1P04150 777 aa12.86□□□□□ -0.35
SMU1-201ENST00000397149 OR1G1P47890 313 aa12.86□□□□□ -0.35
SMU1-201ENST00000397149 CCT3P49368 545 aaKnown RBP12.86□□□□□ -0.35
SMU1-201ENST00000397149 RNF44Q7L0R7 432 aa12.86□□□□□ -0.35
SMU1-201ENST00000397149 PRPF39Q86UA1 669 aaKnown RBP12.86□□□□□ -0.35
SMU1-201ENST00000397149 GPD1LQ8N335 351 aa12.86□□□□□ -0.35
SMU1-201ENST00000397149 FANCEQ9HB96 536 aa12.86□□□□□ -0.35
SMU1-201ENST00000397149 XPO7Q9UIA9 1087 aaKnown RBP12.86□□□□□ -0.35
SMU1-201ENST00000397149 DGKDQ16760 1214 aa12.86□□□□□ -0.35
SMU1-201ENST00000397149 PALB2Q86YC2 1186 aa12.86□□□□□ -0.35
SMU1-201ENST00000397149 VIPAS39Q9H9C1 493 aa12.86□□□□□ -0.35
SMU1-201ENST00000397149 RBAKQ9NYW8 714 aaPredicted RBP12.86□□□□□ -0.35
SMU1-201ENST00000397149 MRC2Q9UBG0 1479 aa12.86□□□□□ -0.35
SMU1-201ENST00000397149 GUCY1B2O75343 617 aa12.86□□□□□ -0.35
SMU1-201ENST00000397149 CCR4P51679 360 aa12.86□□□□□ -0.35
SMU1-201ENST00000397149 SLC30A9Q6PML9 568 aa12.86□□□□□ -0.35
SMU1-201ENST00000397149 STKLD1Q8NE28 680 aa12.86□□□□□ -0.35
SMU1-201ENST00000397149 ZSCAN18Q8TBC5 510 aaPredicted RBP12.86□□□□□ -0.35
SMU1-201ENST00000397149 MRPL4Q9BYD3 311 aaKnown RBP12.86□□□□□ -0.35
SMU1-201ENST00000397149 CPVLQ9H3G5 476 aa12.86□□□□□ -0.35
SMU1-201ENST00000397149 IPPQ9Y573 584 aa12.86□□□□□ -0.35
SMU1-201ENST00000397149 C21orf2O43822 256 aa12.86□□□□□ -0.35
SMU1-201ENST00000397149 OR6A2O95222 327 aa12.86□□□□□ -0.35
SMU1-201ENST00000397149 ATP6V1B2P21281 511 aa12.86□□□□□ -0.35
SMU1-201ENST00000397149 YWHABP31946 246 aaKnown RBP12.86□□□□□ -0.35
SMU1-201ENST00000397149 NUDT2P50583 147 aa12.86□□□□□ -0.35
SMU1-201ENST00000397149 LONRF1Q17RB8 773 aa12.86□□□□□ -0.35
SMU1-201ENST00000397149 TCEAL5Q5H9L2 206 aa12.86□□□□□ -0.35
SMU1-201ENST00000397149 NOL9Q5SY16 702 aaKnown RBP12.86□□□□□ -0.35
SMU1-201ENST00000397149 SLC30A5Q8TAD4 765 aa12.86□□□□□ -0.35
SMU1-201ENST00000397149 SCAF11Q99590 1463 aaKnown RBP12.86□□□□□ -0.35
SMU1-201ENST00000397149 MAP3K19Q56UN5 1328 aa12.86□□□□□ -0.35
SMU1-201ENST00000397149 SAC3D1A6NKF1 404 aa12.86□□□□□ -0.35
SMU1-201ENST00000397149 TFE3P19532 575 aaPredicted RBP12.86□□□□□ -0.35
SMU1-201ENST00000397149 PDHA2P29803 388 aa12.86□□□□□ -0.35
SMU1-201ENST00000397149 JAK3P52333 1124 aa12.86□□□□□ -0.35
SMU1-201ENST00000397149 OTUD4Q01804 1114 aaKnown RBP12.86□□□□□ -0.35
SMU1-201ENST00000397149 RASGRF1Q13972 1273 aa12.86□□□□□ -0.35
SMU1-201ENST00000397149 PDZK1Q5T2W1 519 aa12.86□□□□□ -0.35
SMU1-201ENST00000397149 TTC23Q5W5X9 447 aa12.86□□□□□ -0.35
SMU1-201ENST00000397149 DDHD1Q8NEL9 900 aa12.86□□□□□ -0.35
SMU1-201ENST00000397149 PACSIN1Q9BY11 444 aa12.86□□□□□ -0.35
SMU1-201ENST00000397149 PTPRHQ9HD43 1115 aa12.86□□□□□ -0.35
SMU1-201ENST00000397149 CHKBQ9Y259 395 aa12.86□□□□□ -0.35
SMU1-201ENST00000397149 SRPRBQ9Y5M8 271 aaKnown RBP12.86□□□□□ -0.35
SMU1-201ENST00000397149 PSMD12O00232 456 aaPredicted RBP12.86□□□□□ -0.35
SMU1-201ENST00000397149 PRODHO43272 600 aa12.86□□□□□ -0.35
SMU1-201ENST00000397149 POTEIP0CG38 1075 aa12.86□□□□□ -0.35
SMU1-201ENST00000397149 EIF2S3P41091 472 aaKnown RBP12.86□□□□□ -0.35
SMU1-201ENST00000397149 DRAP1Q14919 205 aaPredicted RBP12.86□□□□□ -0.35
SMU1-201ENST00000397149 SLC39A14Q15043 492 aa12.86□□□□□ -0.35
SMU1-201ENST00000397149 TRIQKQ629K1 86 aa12.86□□□□□ -0.35
SMU1-201ENST00000397149 EMBQ6PCB8 327 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms