RNA–Protein interactions for RNA: ENST00000397101.5

SEC13-205, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-205ENST00000397101 C7orf25Q9BPX7 421 aa14.87□□□□□ -0.03
SEC13-205ENST00000397101 ADPGKQ9BRR6 497 aa14.87□□□□□ -0.03
SEC13-205ENST00000397101 TRMT61BQ9BVS5 477 aaKnown RBP14.87□□□□□ -0.03
SEC13-205ENST00000397101 POLR3FQ9H1D9 316 aaPredicted RBP14.87□□□□□ -0.03
SEC13-205ENST00000397101 PDZD7Q9H5P4 517 aa14.87□□□□□ -0.03
SEC13-205ENST00000397101 ZNF334Q9HCZ1 680 aaPredicted RBP14.87□□□□□ -0.03
SEC13-205ENST00000397101 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.87□□□□□ -0.03
SEC13-205ENST00000397101 VWA8A3KMH1 1905 aa14.86□□□□□ -0.03
SEC13-205ENST00000397101 LOC105378220A0A1B0GUY1 285 aaPredicted RBP14.86□□□□□ -0.03
SEC13-205ENST00000397101 B3GAT3O94766 335 aa14.86□□□□□ -0.03
SEC13-205ENST00000397101 ABLIM3O94929 683 aa14.86□□□□□ -0.03
SEC13-205ENST00000397101 FAM13AO94988 1023 aa14.86□□□□□ -0.03
SEC13-205ENST00000397101 LRG1P02750 347 aa14.86□□□□□ -0.03
SEC13-205ENST00000397101 RPN1P04843 607 aaKnown RBP14.86□□□□□ -0.03
SEC13-205ENST00000397101 CEBPBP17676 345 aa14.86□□□□□ -0.03
SEC13-205ENST00000397101 PSMC3P17980 439 aa14.86□□□□□ -0.03
SEC13-205ENST00000397101 CXCL12P48061 93 aa14.86□□□□□ -0.03
SEC13-205ENST00000397101 LIMK1P53667 647 aa14.86□□□□□ -0.03
SEC13-205ENST00000397101 ISM2Q6H9L7 571 aa14.86□□□□□ -0.03
SEC13-205ENST00000397101 CCDC65Q8IXS2 484 aa14.86□□□□□ -0.03
SEC13-205ENST00000397101 DDX27Q96GQ7 796 aaKnown RBP14.86□□□□□ -0.03
SEC13-205ENST00000397101 RUSC1Q9BVN2 902 aa14.86□□□□□ -0.03
SEC13-205ENST00000397101 TRIM9Q9C026 710 aa14.86□□□□□ -0.03
SEC13-205ENST00000397101 LMAN1LQ9HAT1 526 aa14.86□□□□□ -0.03
SEC13-205ENST00000397101 TRPV4Q9HBA0 871 aa14.86□□□□□ -0.03
SEC13-205ENST00000397101 EXOC1Q9NV70 894 aa14.86□□□□□ -0.03
SEC13-205ENST00000397101 RMND1Q9NWS8 449 aa14.86□□□□□ -0.03
SEC13-205ENST00000397101 KCND2Q9NZV8 630 aa14.86□□□□□ -0.03
SEC13-205ENST00000397101 KIAA1468Q9P260 1216 aa14.86□□□□□ -0.03
SEC13-205ENST00000397101 PCDHA5Q9Y5H7 936 aa14.86□□□□□ -0.03
SEC13-205ENST00000397101 SYCE3A1L190 88 aa14.85□□□□□ -0.03
SEC13-205ENST00000397101 LRRIQ4A6NIV6 560 aa14.85□□□□□ -0.03
SEC13-205ENST00000397101 BIN1O00499 593 aa14.85□□□□□ -0.03
SEC13-205ENST00000397101 ACKR2O00590 384 aa14.85□□□□□ -0.03
SEC13-205ENST00000397101 CHRNB1P11230 501 aa14.85□□□□□ -0.03
SEC13-205ENST00000397101 ATF2P15336 505 aa14.85□□□□□ -0.03
SEC13-205ENST00000397101 ELF1P32519 619 aa14.85□□□□□ -0.03
SEC13-205ENST00000397101 SHC2P98077 582 aa14.85□□□□□ -0.03
SEC13-205ENST00000397101 DPYDQ12882 1025 aa14.85□□□□□ -0.03
SEC13-205ENST00000397101 SIM2Q14190 667 aaPredicted RBP14.85□□□□□ -0.03
SEC13-205ENST00000397101 MAPK6Q16659 721 aa14.85□□□□□ -0.03
SEC13-205ENST00000397101 UPP1Q16831 310 aa14.85□□□□□ -0.03
SEC13-205ENST00000397101 ZSCAN23Q3MJ62 389 aa14.85□□□□□ -0.03
SEC13-205ENST00000397101 DCAF4L1Q3SXM0 396 aa14.85□□□□□ -0.03
SEC13-205ENST00000397101 CD300LGQ6UXG3 332 aa14.85□□□□□ -0.03
SEC13-205ENST00000397101 C1orf186Q6ZWK4 172 aa14.85□□□□□ -0.03
SEC13-205ENST00000397101 TCEAL8Q8IYN2 117 aa14.85□□□□□ -0.03
SEC13-205ENST00000397101 SPEM1Q8N4L4 309 aa14.85□□□□□ -0.03
SEC13-205ENST00000397101 LEMD2Q8NC56 503 aa14.85□□□□□ -0.03
SEC13-205ENST00000397101 PPP1R10Q96QC0 940 aaKnown RBP14.85□□□□□ -0.03
SEC13-205ENST00000397101 POLD4Q9HCU8 107 aa14.85□□□□□ -0.03
SEC13-205ENST00000397101 PANK4Q9NVE7 773 aa14.85□□□□□ -0.03
SEC13-205ENST00000397101 MAFFQ9ULX9 164 aa14.85□□□□□ -0.03
SEC13-205ENST00000397101 NDRG2Q9UN36 371 aaKnown RBP14.85□□□□□ -0.03
SEC13-205ENST00000397101 CHD8Q9HCK8 2581 aa14.85□□□□□ -0.03
SEC13-205ENST00000397101 USP24Q9UPU5 2620 aa14.84□□□□□ -0.03
SEC13-205ENST00000397101 WDR27A2RRH5 827 aa14.84□□□□□ -0.03
SEC13-205ENST00000397101 HIP1RO75146 1068 aa14.84□□□□□ -0.03
SEC13-205ENST00000397101 TKTP29401 623 aaKnown RBP14.84□□□□□ -0.03
SEC13-205ENST00000397101 PMLP29590 882 aa14.84□□□□□ -0.03
SEC13-205ENST00000397101 HOXA6P31267 233 aa14.84□□□□□ -0.03
SEC13-205ENST00000397101 ROR1Q01973 937 aa14.84□□□□□ -0.03
SEC13-205ENST00000397101 PRPF4BQ13523 1007 aaKnown RBP14.84□□□□□ -0.03
SEC13-205ENST00000397101 ARSHQ5FYA8 562 aa14.84□□□□□ -0.03
SEC13-205ENST00000397101 FAM78AQ5JUQ0 283 aa14.84□□□□□ -0.03
SEC13-205ENST00000397101 TPGS2Q68CL5 300 aa14.84□□□□□ -0.03
SEC13-205ENST00000397101 PRR23BQ6ZRT6 265 aa14.84□□□□□ -0.03
SEC13-205ENST00000397101 LONP2Q86WA8 852 aa14.84□□□□□ -0.03
SEC13-205ENST00000397101 MYCT1Q8N699 235 aa14.84□□□□□ -0.03
SEC13-205ENST00000397101 SMARCD2Q92925 531 aa14.84□□□□□ -0.03
SEC13-205ENST00000397101 E2F7Q96AV8 911 aa14.84□□□□□ -0.03
SEC13-205ENST00000397101 REEP2Q9BRK0 252 aa14.84□□□□□ -0.03
SEC13-205ENST00000397101 TIPINQ9BVW5 301 aa14.84□□□□□ -0.03
SEC13-205ENST00000397101 ANGPTL2Q9UKU9 493 aa14.84□□□□□ -0.03
SEC13-205ENST00000397101 PIAS3Q9Y6X2 628 aa14.84□□□□□ -0.03
SEC13-205ENST00000397101 COL4A2P08572 1712 aa14.83□□□□□ -0.03
SEC13-205ENST00000397101 CHD6Q8TD26 2715 aa14.83□□□□□ -0.04
SEC13-205ENST00000397101 PVALEFA0A1B0GWK0 134 aa14.83□□□□□ -0.04
SEC13-205ENST00000397101 TTLL13PA6NNM8 815 aa14.83□□□□□ -0.04
SEC13-205ENST00000397101 SFI1A8K8P3 1242 aa14.83□□□□□ -0.04
SEC13-205ENST00000397101 ARNTLO00327 626 aa14.83□□□□□ -0.04
SEC13-205ENST00000397101 SYN3O14994 580 aa14.83□□□□□ -0.04
SEC13-205ENST00000397101 HRO43593 1189 aa14.83□□□□□ -0.04
SEC13-205ENST00000397101 GUCY2CP25092 1073 aa14.83□□□□□ -0.04
SEC13-205ENST00000397101 GDI1P31150 447 aa14.83□□□□□ -0.04
SEC13-205ENST00000397101 CLCNKBP51801 687 aa14.83□□□□□ -0.04
SEC13-205ENST00000397101 EPHA5P54756 1037 aa14.83□□□□□ -0.04
SEC13-205ENST00000397101 SATB1Q01826 763 aa14.83□□□□□ -0.04
SEC13-205ENST00000397101 LRRC32Q14392 662 aa14.83□□□□□ -0.04
SEC13-205ENST00000397101 GAS6Q14393 721 aa14.83□□□□□ -0.04
SEC13-205ENST00000397101 GRM2Q14416 872 aa14.83□□□□□ -0.04
SEC13-205ENST00000397101 LPAL2Q16609 132 aa14.83□□□□□ -0.04
SEC13-205ENST00000397101 KMT5BQ4FZB7 885 aa14.83□□□□□ -0.04
SEC13-205ENST00000397101 CYP4A22Q5TCH4 519 aa14.83□□□□□ -0.04
SEC13-205ENST00000397101 VITQ6UXI7 678 aa14.83□□□□□ -0.04
SEC13-205ENST00000397101 UNC13DQ70J99 1090 aa14.83□□□□□ -0.04
SEC13-205ENST00000397101 PDZD4Q76G19 769 aaPredicted RBP14.83□□□□□ -0.04
SEC13-205ENST00000397101 MFSD6LQ8IWD5 586 aa14.83□□□□□ -0.04
SEC13-205ENST00000397101 DRC1Q96MC2 740 aa14.83□□□□□ -0.04
SEC13-205ENST00000397101 GSDMAQ96QA5 445 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms