RNA–Protein interactions for RNA: ENST00000396342.6

DDR1-229, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 675 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-229ENST00000396342 CCSER1Q9C0I3 900 aa17.73■□□□□ 0.43
DDR1-229ENST00000396342 THG1LQ9NWX6 298 aaKnown RBP17.73■□□□□ 0.43
DDR1-229ENST00000396342 DLGAP2Q9P1A6 1054 aa17.73■□□□□ 0.43
DDR1-229ENST00000396342 HSFX1Q9UBD0 423 aa17.73■□□□□ 0.43
DDR1-229ENST00000396342 PCDHB13Q9Y5F0 798 aa17.73■□□□□ 0.43
DDR1-229ENST00000396342 C2orf16Q68DN1 1984 aa17.73■□□□□ 0.43
DDR1-229ENST00000396342 LDHAP00338 332 aaKnown RBP17.72■□□□□ 0.43
DDR1-229ENST00000396342 SDHBP21912 280 aa17.72■□□□□ 0.43
DDR1-229ENST00000396342 PNPLA4P41247 253 aa17.72■□□□□ 0.43
DDR1-229ENST00000396342 TAF6P49848 677 aa17.72■□□□□ 0.43
DDR1-229ENST00000396342 GTF2BQ00403 316 aa17.72■□□□□ 0.43
DDR1-229ENST00000396342 POU5F1Q01860 360 aaKnown RBP17.72■□□□□ 0.43
DDR1-229ENST00000396342 LRRC32Q14392 662 aa17.72■□□□□ 0.43
DDR1-229ENST00000396342 ZBTB6Q15916 424 aa17.72■□□□□ 0.43
DDR1-229ENST00000396342 SV2CQ496J9 727 aa17.72■□□□□ 0.43
DDR1-229ENST00000396342 C9orf57Q5W0N0 161 aa17.72■□□□□ 0.43
DDR1-229ENST00000396342 CCDC73Q6ZRK6 1079 aa17.72■□□□□ 0.43
DDR1-229ENST00000396342 NT5DC4Q86YG4 428 aa17.72■□□□□ 0.43
DDR1-229ENST00000396342 MFSD6LQ8IWD5 586 aa17.72■□□□□ 0.43
DDR1-229ENST00000396342 DCP1BQ8IZD4 617 aaKnown RBP17.72■□□□□ 0.43
DDR1-229ENST00000396342 HS6ST3Q8IZP7 471 aa17.72■□□□□ 0.43
DDR1-229ENST00000396342 C2orf15Q8WU43 125 aaKnown RBP17.72■□□□□ 0.43
DDR1-229ENST00000396342 FAM3CQ92520 227 aa17.72■□□□□ 0.43
DDR1-229ENST00000396342 ACCSQ96QU6 501 aa17.72■□□□□ 0.43
DDR1-229ENST00000396342 SEPT5Q99719 369 aaPredicted RBP17.72■□□□□ 0.43
DDR1-229ENST00000396342 LRRC27Q9C0I9 530 aa17.72■□□□□ 0.43
DDR1-229ENST00000396342 ATXN3LQ9H3M9 355 aa17.72■□□□□ 0.43
DDR1-229ENST00000396342 TRPV5Q9NQA5 729 aa17.72■□□□□ 0.43
DDR1-229ENST00000396342 ZSCAN32Q9NX65 697 aa17.72■□□□□ 0.43
DDR1-229ENST00000396342 CEP72Q9P209 647 aa17.72■□□□□ 0.43
DDR1-229ENST00000396342 ZMYM5Q9UJ78 669 aa17.72■□□□□ 0.43
DDR1-229ENST00000396342 CPSF3Q9UKF6 684 aaKnown RBP17.72■□□□□ 0.43
DDR1-229ENST00000396342 C2CD2Q9Y426 696 aa17.72■□□□□ 0.43
DDR1-229ENST00000396342 PIAS3Q9Y6X2 628 aa17.72■□□□□ 0.43
DDR1-229ENST00000396342 CDC25CP30307 473 aa17.71■□□□□ 0.43
DDR1-229ENST00000396342 NMT1P30419 496 aaKnown RBP17.71■□□□□ 0.43
DDR1-229ENST00000396342 AARSP49588 968 aaKnown RBP eCLIP17.71■□□□□ 0.43
DDR1-229ENST00000396342 ACOT2P49753 483 aa17.71■□□□□ 0.43
DDR1-229ENST00000396342 TSPY1Q01534 308 aa17.71■□□□□ 0.43
DDR1-229ENST00000396342 ALCAMQ13740 583 aa17.71■□□□□ 0.43
DDR1-229ENST00000396342 TEAD2Q15562 447 aa17.71■□□□□ 0.43
DDR1-229ENST00000396342 MGAT5BQ3V5L5 792 aa17.71■□□□□ 0.43
DDR1-229ENST00000396342 DYMQ7RTS9 669 aa17.71■□□□□ 0.43
DDR1-229ENST00000396342 EXOC4Q96A65 974 aa17.71■□□□□ 0.43
DDR1-229ENST00000396342 PYM1Q9BRP8 204 aaKnown RBP17.71■□□□□ 0.43
DDR1-229ENST00000396342 PLA2G2FQ9BZM2 168 aa17.71■□□□□ 0.43
DDR1-229ENST00000396342 C8orf33Q9H7E9 229 aaPredicted RBP17.71■□□□□ 0.43
DDR1-229ENST00000396342 TRPV4Q9HBA0 871 aa17.71■□□□□ 0.43
DDR1-229ENST00000396342 ZNF334Q9HCZ1 680 aaPredicted RBP17.71■□□□□ 0.43
DDR1-229ENST00000396342 DPP3Q9NY33 737 aa17.71■□□□□ 0.43
DDR1-229ENST00000396342 A0A1W2PRU2 124 aa17.7■□□□□ 0.42
DDR1-229ENST00000396342 CYB561D2O14569 222 aa17.7■□□□□ 0.42
DDR1-229ENST00000396342 LRRN2O75325 713 aa17.7■□□□□ 0.42
DDR1-229ENST00000396342 OR4Q2P0C623 313 aa17.7■□□□□ 0.42
DDR1-229ENST00000396342 IDEP14735 1019 aa17.7■□□□□ 0.42
DDR1-229ENST00000396342 TARSP26639 723 aaKnown RBP17.7■□□□□ 0.42
DDR1-229ENST00000396342 STAT6P42226 847 aa17.7■□□□□ 0.42
DDR1-229ENST00000396342 CCR3P51677 355 aa17.7■□□□□ 0.42
DDR1-229ENST00000396342 EPHA5P54756 1037 aa17.7■□□□□ 0.42
DDR1-229ENST00000396342 CENPPQ6IPU0 288 aa17.7■□□□□ 0.42
DDR1-229ENST00000396342 KIAA2013Q8IYS2 634 aa17.7■□□□□ 0.42
DDR1-229ENST00000396342 NOC3LQ8WTT2 800 aaKnown RBP17.7■□□□□ 0.42
DDR1-229ENST00000396342 CLDN23Q96B33 292 aa17.7■□□□□ 0.42
DDR1-229ENST00000396342 ST6GALNAC4Q9H4F1 302 aa17.7■□□□□ 0.42
DDR1-229ENST00000396342 BLOC1S4Q9NUP1 217 aa17.7■□□□□ 0.42
DDR1-229ENST00000396342 GMEB2Q9UKD1 530 aa17.7■□□□□ 0.42
DDR1-229ENST00000396342 SLC27A5Q9Y2P5 690 aa17.7■□□□□ 0.42
DDR1-229ENST00000396342 MTCL1Q9Y4B5 1905 aaKnown RBP17.69■□□□□ 0.42
DDR1-229ENST00000396342 HEPACAM2A8MVW5 462 aa17.69■□□□□ 0.42
DDR1-229ENST00000396342 GCNT3O95395 438 aa17.69■□□□□ 0.42
DDR1-229ENST00000396342 ADRB2P07550 413 aa17.69■□□□□ 0.42
DDR1-229ENST00000396342 GJA1P17302 382 aa17.69■□□□□ 0.42
DDR1-229ENST00000396342 VIPR2P41587 438 aa17.69■□□□□ 0.42
DDR1-229ENST00000396342 GUCY2FP51841 1108 aa17.69■□□□□ 0.42
DDR1-229ENST00000396342 PLCB2Q00722 1185 aa17.69■□□□□ 0.42
DDR1-229ENST00000396342 SLC39A12Q504Y0 691 aa17.69■□□□□ 0.42
DDR1-229ENST00000396342 ARHGAP29Q52LW3 1261 aa17.69■□□□□ 0.42
DDR1-229ENST00000396342 ZNF720Q7Z2F6 126 aa17.69■□□□□ 0.42
DDR1-229ENST00000396342 DNAJB7Q7Z6W7 309 aaPredicted RBP17.69■□□□□ 0.42
DDR1-229ENST00000396342 ATAD1Q8NBU5 361 aa17.69■□□□□ 0.42
DDR1-229ENST00000396342 SPPL2BQ8TCT7 592 aa17.69■□□□□ 0.42
DDR1-229ENST00000396342 PSMG2Q969U7 264 aa17.69■□□□□ 0.42
DDR1-229ENST00000396342 HAPLN2Q9GZV7 340 aa17.69■□□□□ 0.42
DDR1-229ENST00000396342 MTF2Q9Y483 593 aaPredicted RBP17.69■□□□□ 0.42
DDR1-229ENST00000396342 WDFY4Q6ZS81 3184 aa17.69■□□□□ 0.42
DDR1-229ENST00000396342 MTMR11A4FU01 709 aa17.68■□□□□ 0.42
DDR1-229ENST00000396342 CHADO15335 359 aa17.68■□□□□ 0.42
DDR1-229ENST00000396342 HUS1O60921 280 aa17.68■□□□□ 0.42
DDR1-229ENST00000396342 NFICP08651 508 aa17.68■□□□□ 0.42
DDR1-229ENST00000396342 GABRR2P28476 465 aa17.68■□□□□ 0.42
DDR1-229ENST00000396342 CCR2P41597 374 aa17.68■□□□□ 0.42
DDR1-229ENST00000396342 MLLT6P55198 1093 aaPredicted RBP17.68■□□□□ 0.42
DDR1-229ENST00000396342 TFAMQ00059 246 aaKnown RBP17.68■□□□□ 0.42
DDR1-229ENST00000396342 AMPD2Q01433 879 aa17.68■□□□□ 0.42
DDR1-229ENST00000396342 CEBPZQ03701 1054 aaKnown RBP17.68■□□□□ 0.42
DDR1-229ENST00000396342 ZC2HC1CQ53FD0 456 aaPredicted RBP17.68■□□□□ 0.42
DDR1-229ENST00000396342 GPR158Q5T848 1215 aa17.68■□□□□ 0.42
DDR1-229ENST00000396342 VITQ6UXI7 678 aa17.68■□□□□ 0.42
DDR1-229ENST00000396342 SFR1Q86XK3 245 aa17.68■□□□□ 0.42
DDR1-229ENST00000396342 SHKBP1Q8TBC3 707 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms