RNA–Protein interactions for RNA: ENST00000395860.6

VCPKMT-202, Transcript of valosin containing protein lysine methyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCPKMT, Length 1,761 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-202ENST00000395860 TTC3P53804 2025 aa21.82■■□□□ 1.08
VCPKMT-202ENST00000395860 TRIM43BA6NCK2 446 aa21.82■■□□□ 1.08
VCPKMT-202ENST00000395860 CASTOR2A6NHX0 329 aa21.82■■□□□ 1.08
VCPKMT-202ENST00000395860 FGFR1P11362 822 aa21.82■■□□□ 1.08
VCPKMT-202ENST00000395860 GNA15P30679 374 aa21.82■■□□□ 1.08
VCPKMT-202ENST00000395860 CLCNKBP51801 687 aa21.82■■□□□ 1.08
VCPKMT-202ENST00000395860 VAV2P52735 878 aa21.82■■□□□ 1.08
VCPKMT-202ENST00000395860 ZNF132P52740 706 aa21.82■■□□□ 1.08
VCPKMT-202ENST00000395860 ZNF394Q53GI3 561 aa21.82■■□□□ 1.08
VCPKMT-202ENST00000395860 CCDC122Q5T0U0 273 aa21.82■■□□□ 1.08
VCPKMT-202ENST00000395860 ALKBH5Q6P6C2 394 aaKnown RBP21.82■■□□□ 1.08
VCPKMT-202ENST00000395860 CNKSR3Q6P9H4 555 aa21.82■■□□□ 1.08
VCPKMT-202ENST00000395860 UBE2Q1Q7Z7E8 422 aa21.82■■□□□ 1.08
VCPKMT-202ENST00000395860 SLC30A5Q8TAD4 765 aa21.82■■□□□ 1.08
VCPKMT-202ENST00000395860 TRIM43Q96BQ3 446 aaPredicted RBP21.82■■□□□ 1.08
VCPKMT-202ENST00000395860 FAM124BQ9H5Z6 455 aaPredicted RBP21.82■■□□□ 1.08
VCPKMT-202ENST00000395860 LZTFL1Q9NQ48 299 aa21.82■■□□□ 1.08
VCPKMT-202ENST00000395860 CACNG4Q9UBN1 327 aa21.82■■□□□ 1.08
VCPKMT-202ENST00000395860 ALPK3Q96L96 1907 aa21.81■■□□□ 1.08
VCPKMT-202ENST00000395860 A0A0U1RQJ8 604 aa21.81■■□□□ 1.08
VCPKMT-202ENST00000395860 PODXLO00592 558 aa21.81■■□□□ 1.08
VCPKMT-202ENST00000395860 CALCAP01258 141 aa21.81■■□□□ 1.08
VCPKMT-202ENST00000395860 MMEP08473 750 aa21.81■■□□□ 1.08
VCPKMT-202ENST00000395860 RPL9P32969 192 aaKnown RBP21.81■■□□□ 1.08
VCPKMT-202ENST00000395860 LILRA4P59901 499 aa21.81■■□□□ 1.08
VCPKMT-202ENST00000395860 CDR2Q01850 454 aa21.81■■□□□ 1.08
VCPKMT-202ENST00000395860 TUSC3Q13454 348 aa21.81■■□□□ 1.08
VCPKMT-202ENST00000395860 IKBKEQ14164 716 aa21.81■■□□□ 1.08
VCPKMT-202ENST00000395860 ARHGAP29Q52LW3 1261 aa21.81■■□□□ 1.08
VCPKMT-202ENST00000395860 NOMO2Q5JPE7 1267 aa21.81■■□□□ 1.08
VCPKMT-202ENST00000395860 ZNF677Q86XU0 584 aa21.81■■□□□ 1.08
VCPKMT-202ENST00000395860 TTC39CQ8N584 583 aa21.81■■□□□ 1.08
VCPKMT-202ENST00000395860 OLIG1Q8TAK6 271 aa21.81■■□□□ 1.08
VCPKMT-202ENST00000395860 ATRIPQ8WXE1 791 aa21.81■■□□□ 1.08
VCPKMT-202ENST00000395860 RNF216Q9NWF9 866 aaPredicted RBP21.81■■□□□ 1.08
VCPKMT-202ENST00000395860 GDAP2Q9NXN4 497 aa21.81■■□□□ 1.08
VCPKMT-202ENST00000395860 LOC101059915A0A1B0GWI6 518 aaPredicted RBP21.8■■□□□ 1.08
VCPKMT-202ENST00000395860 CHRNB2P17787 502 aa21.8■■□□□ 1.08
VCPKMT-202ENST00000395860 ITGB8P26012 769 aa21.8■■□□□ 1.08
VCPKMT-202ENST00000395860 C10orf76Q5T2E6 689 aa21.8■■□□□ 1.08
VCPKMT-202ENST00000395860 ABI1Q8IZP0 508 aa21.8■■□□□ 1.08
VCPKMT-202ENST00000395860 TXLNBQ8N3L3 684 aa21.8■■□□□ 1.08
VCPKMT-202ENST00000395860 DDX1Q92499 740 aaKnown RBP21.8■■□□□ 1.08
VCPKMT-202ENST00000395860 KANSL3Q9P2N6 904 aa21.8■■□□□ 1.08
VCPKMT-202ENST00000395860 PUF60Q9UHX1 559 aaKnown RBP21.8■■□□□ 1.08
VCPKMT-202ENST00000395860 LTBP2Q14767 1821 aa21.79■■□□□ 1.08
VCPKMT-202ENST00000395860 SPTLC1O15269 473 aa21.79■■□□□ 1.08
VCPKMT-202ENST00000395860 CILPO75339 1184 aa21.79■■□□□ 1.08
VCPKMT-202ENST00000395860 FMO1Q01740 532 aa21.79■■□□□ 1.08
VCPKMT-202ENST00000395860 UPP1Q16831 310 aa21.79■■□□□ 1.08
VCPKMT-202ENST00000395860 DDX27Q96GQ7 796 aaKnown RBP21.79■■□□□ 1.08
VCPKMT-202ENST00000395860 C16orf45Q96MC5 204 aaPredicted RBP21.79■■□□□ 1.08
VCPKMT-202ENST00000395860 UROC1Q96N76 676 aa21.79■■□□□ 1.08
VCPKMT-202ENST00000395860 THAP12O43422 761 aa21.79■■□□□ 1.08
VCPKMT-202ENST00000395860 INCA1Q0VD86 236 aa21.79■■□□□ 1.08
VCPKMT-202ENST00000395860 PTPN14Q15678 1187 aa21.79■■□□□ 1.08
VCPKMT-202ENST00000395860 TMEM199Q8N511 208 aa21.79■■□□□ 1.08
VCPKMT-202ENST00000395860 PDCL3Q9H2J4 239 aa21.79■■□□□ 1.08
VCPKMT-202ENST00000395860 RRAGDQ9NQL2 400 aaPredicted RBP21.79■■□□□ 1.08
VCPKMT-202ENST00000395860 BARX2Q9UMQ3 279 aaPredicted RBP21.79■■□□□ 1.08
VCPKMT-202ENST00000395860 NENFQ9UMX5 172 aa21.79■■□□□ 1.08
VCPKMT-202ENST00000395860 TFR2Q9UP52 801 aa21.79■■□□□ 1.08
VCPKMT-202ENST00000395860 HOXA2O43364 376 aa21.78■■□□□ 1.08
VCPKMT-202ENST00000395860 HUS1O60921 280 aa21.78■■□□□ 1.08
VCPKMT-202ENST00000395860 CSF2RAP15509 400 aa21.78■■□□□ 1.08
VCPKMT-202ENST00000395860 RNASELQ05823 741 aaKnown RBP21.78■■□□□ 1.08
VCPKMT-202ENST00000395860 KIF5AQ12840 1032 aa21.78■■□□□ 1.08
VCPKMT-202ENST00000395860 SOWAHAQ2M3V2 549 aa21.78■■□□□ 1.08
VCPKMT-202ENST00000395860 MFSD5Q6N075 450 aa21.78■■□□□ 1.08
VCPKMT-202ENST00000395860 ZNF662Q6ZS27 426 aa21.78■■□□□ 1.08
VCPKMT-202ENST00000395860 PALB2Q86YC2 1186 aa21.78■■□□□ 1.08
VCPKMT-202ENST00000395860 APPL2Q8NEU8 664 aa21.78■■□□□ 1.08
VCPKMT-202ENST00000395860 RABGGTAQ92696 567 aa21.78■■□□□ 1.08
VCPKMT-202ENST00000395860 MRPL45Q9BRJ2 306 aaKnown RBP21.78■■□□□ 1.08
VCPKMT-202ENST00000395860 PAAF1Q9BRP4 392 aa21.78■■□□□ 1.08
VCPKMT-202ENST00000395860 TSGA10Q9BZW7 698 aa21.78■■□□□ 1.08
VCPKMT-202ENST00000395860 FNDC1Q4ZHG4 1894 aaPredicted RBP21.78■■□□□ 1.08
VCPKMT-202ENST00000395860 RCCD1A6NED2 376 aa21.77■■□□□ 1.08
VCPKMT-202ENST00000395860 TMCO5BA8MYB1 307 aa21.77■■□□□ 1.08
VCPKMT-202ENST00000395860 KRT86O43790 486 aa21.77■■□□□ 1.08
VCPKMT-202ENST00000395860 PAEPP09466 180 aa21.77■■□□□ 1.08
VCPKMT-202ENST00000395860 ARHGAP25P42331 645 aa21.77■■□□□ 1.08
VCPKMT-202ENST00000395860 RAD23BP54727 409 aa21.77■■□□□ 1.08
VCPKMT-202ENST00000395860 NPAS4Q8IUM7 802 aa21.77■■□□□ 1.08
VCPKMT-202ENST00000395860 WHAMMQ8TF30 809 aa21.77■■□□□ 1.08
VCPKMT-202ENST00000395860 ZNF606Q8WXB4 792 aa21.77■■□□□ 1.08
VCPKMT-202ENST00000395860 VWCEQ96DN2 955 aa21.77■■□□□ 1.08
VCPKMT-202ENST00000395860 TMEM176AQ96HP8 235 aa21.77■■□□□ 1.08
VCPKMT-202ENST00000395860 FAM193BQ96PV7 902 aaPredicted RBP21.77■■□□□ 1.08
VCPKMT-202ENST00000395860 PCDHB18PQ96TA0 734 aa21.77■■□□□ 1.08
VCPKMT-202ENST00000395860 TBC1D13Q9NVG8 400 aa21.77■■□□□ 1.08
VCPKMT-202ENST00000395860 HMGXB4Q9UGU5 601 aa21.77■■□□□ 1.08
VCPKMT-202ENST00000395860 NDST1P52848 882 aa21.76■■□□□ 1.07
VCPKMT-202ENST00000395860 ORC1Q13415 861 aa21.76■■□□□ 1.07
VCPKMT-202ENST00000395860 NYAP1Q6ZVC0 841 aa21.76■■□□□ 1.07
VCPKMT-202ENST00000395860 TOP6BLQ8N6T0 577 aa21.76■■□□□ 1.07
VCPKMT-202ENST00000395860 C3orf58Q8NDZ4 430 aa21.76■■□□□ 1.07
VCPKMT-202ENST00000395860 TWNKQ96RR1 684 aa21.76■■□□□ 1.07
VCPKMT-202ENST00000395860 ELOVL4Q9GZR5 314 aa21.76■■□□□ 1.07
VCPKMT-202ENST00000395860 LACRTQ9GZZ8 138 aa21.76■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms