RNA–Protein interactions for RNA: ENST00000394456.9

GTF2F1-201, Transcript of general transcription factor IIF subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2F1, Length 2,731 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-201ENST00000394456 WDR78Q5VTH9 848 aa14.31□□□□□ -0.12
GTF2F1-201ENST00000394456 ERO1BQ86YB8 467 aa14.31□□□□□ -0.12
GTF2F1-201ENST00000394456 SRRM1Q8IYB3 904 aaKnown RBP14.31□□□□□ -0.12
GTF2F1-201ENST00000394456 SLC17A8Q8NDX2 589 aa14.31□□□□□ -0.12
GTF2F1-201ENST00000394456 DYDC1Q8WWB3 177 aa14.31□□□□□ -0.12
GTF2F1-201ENST00000394456 ZBTB10Q96DT7 871 aa14.31□□□□□ -0.12
GTF2F1-201ENST00000394456 IFT74Q96LB3 600 aa14.31□□□□□ -0.12
GTF2F1-201ENST00000394456 SCLT1Q96NL6 688 aa14.31□□□□□ -0.12
GTF2F1-201ENST00000394456 OSBPL8Q9BZF1 889 aa14.31□□□□□ -0.12
GTF2F1-201ENST00000394456 KIF9Q9HAQ2 790 aa14.31□□□□□ -0.12
GTF2F1-201ENST00000394456 RBAKQ9NYW8 714 aaPredicted RBP14.31□□□□□ -0.12
GTF2F1-201ENST00000394456 SAE1Q9UBE0 346 aaPredicted RBP14.31□□□□□ -0.12
GTF2F1-201ENST00000394456 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.31□□□□□ -0.12
GTF2F1-201ENST00000394456 EXTL3O43909 919 aa14.3□□□□□ -0.12
GTF2F1-201ENST00000394456 CNMDO75829 334 aa14.3□□□□□ -0.12
GTF2F1-201ENST00000394456 UBOX5O94941 541 aa14.3□□□□□ -0.12
GTF2F1-201ENST00000394456 OATP04181 439 aa14.3□□□□□ -0.12
GTF2F1-201ENST00000394456 OGDHQ02218 1023 aa14.3□□□□□ -0.12
GTF2F1-201ENST00000394456 CENPCQ03188 943 aa14.3□□□□□ -0.12
GTF2F1-201ENST00000394456 GAD2Q05329 585 aa14.3□□□□□ -0.12
GTF2F1-201ENST00000394456 PTP4A2Q12974 167 aa14.3□□□□□ -0.12
GTF2F1-201ENST00000394456 CUL2Q13617 745 aa14.3□□□□□ -0.12
GTF2F1-201ENST00000394456 E2F5Q15329 346 aa14.3□□□□□ -0.12
GTF2F1-201ENST00000394456 LY6KQ17RY6 165 aa14.3□□□□□ -0.12
GTF2F1-201ENST00000394456 LACTB2Q53H82 288 aaPredicted RBP14.3□□□□□ -0.12
GTF2F1-201ENST00000394456 ZFYVE27Q5T4F4 411 aa14.3□□□□□ -0.12
GTF2F1-201ENST00000394456 IZUMO3Q5VZ72 239 aa14.3□□□□□ -0.12
GTF2F1-201ENST00000394456 ZBTB33Q86T24 672 aa14.3□□□□□ -0.12
GTF2F1-201ENST00000394456 ANKRD13AQ8IZ07 590 aa14.3□□□□□ -0.12
GTF2F1-201ENST00000394456 RBBP8NLQ8NC74 664 aaPredicted RBP14.3□□□□□ -0.12
GTF2F1-201ENST00000394456 TJP2Q9UDY2 1190 aa14.3□□□□□ -0.12
GTF2F1-201ENST00000394456 PNMA3Q9UL41 463 aa14.3□□□□□ -0.12
GTF2F1-201ENST00000394456 DNPEPQ9ULA0 475 aa14.3□□□□□ -0.12
GTF2F1-201ENST00000394456 TRIM33Q9UPN9 1127 aa14.3□□□□□ -0.12
GTF2F1-201ENST00000394456 MAFBQ9Y5Q3 323 aaPredicted RBP14.3□□□□□ -0.12
GTF2F1-201ENST00000394456 F8VP50 259 aa14.3□□□□□ -0.12
GTF2F1-201ENST00000394456 FARP2O94887 1054 aaPredicted RBP14.3□□□□□ -0.12
GTF2F1-201ENST00000394456 GARTP22102 1010 aa14.3□□□□□ -0.12
GTF2F1-201ENST00000394456 ICAM3P32942 547 aa14.3□□□□□ -0.12
GTF2F1-201ENST00000394456 PSMD6Q15008 389 aa14.3□□□□□ -0.12
GTF2F1-201ENST00000394456 Q3C1V9 767 aa14.3□□□□□ -0.12
GTF2F1-201ENST00000394456 WDR44Q5JSH3 913 aa14.3□□□□□ -0.12
GTF2F1-201ENST00000394456 NUGGCQ68CJ6 796 aa14.3□□□□□ -0.12
GTF2F1-201ENST00000394456 MFSD5Q6N075 450 aa14.3□□□□□ -0.12
GTF2F1-201ENST00000394456 CGB2Q6NT52 195 aa14.3□□□□□ -0.12
GTF2F1-201ENST00000394456 HIBCHQ6NVY1 386 aaPredicted RBP14.3□□□□□ -0.12
GTF2F1-201ENST00000394456 TRMT10CQ7L0Y3 403 aaKnown RBP14.3□□□□□ -0.12
GTF2F1-201ENST00000394456 TBC1D1Q86TI0 1168 aaPredicted RBP14.3□□□□□ -0.12
GTF2F1-201ENST00000394456 CDR2LQ86X02 465 aaPredicted RBP14.3□□□□□ -0.12
GTF2F1-201ENST00000394456 SPOCK2Q92563 424 aa14.3□□□□□ -0.12
GTF2F1-201ENST00000394456 FAM212AQ96EL1 285 aa14.3□□□□□ -0.12
GTF2F1-201ENST00000394456 NAALADL1Q9UQQ1 740 aa14.3□□□□□ -0.12
GTF2F1-201ENST00000394456 GSTTP1A0A1W2PQM5 241 aa14.29□□□□□ -0.12
GTF2F1-201ENST00000394456 TLR3O15455 904 aaKnown RBP14.29□□□□□ -0.12
GTF2F1-201ENST00000394456 SPAG7O75391 227 aa14.29□□□□□ -0.12
GTF2F1-201ENST00000394456 BRAFP15056 766 aa14.29□□□□□ -0.12
GTF2F1-201ENST00000394456 ATF7P17544 494 aaPredicted RBP14.29□□□□□ -0.12
GTF2F1-201ENST00000394456 ITIH2P19823 946 aa14.29□□□□□ -0.12
GTF2F1-201ENST00000394456 BRD2P25440 801 aaKnown RBP14.29□□□□□ -0.12
GTF2F1-201ENST00000394456 GTF2H1P32780 548 aa14.29□□□□□ -0.12
GTF2F1-201ENST00000394456 P3H1Q32P28 736 aa14.29□□□□□ -0.12
GTF2F1-201ENST00000394456 EAPPQ56P03 285 aaPredicted RBP14.29□□□□□ -0.12
GTF2F1-201ENST00000394456 PARP9Q8IXQ6 854 aa14.29□□□□□ -0.12
GTF2F1-201ENST00000394456 KIF2BQ8N4N8 673 aa14.29□□□□□ -0.12
GTF2F1-201ENST00000394456 SLCO2A1Q92959 643 aa14.29□□□□□ -0.12
GTF2F1-201ENST00000394456 PCYT2Q99447 389 aa14.29□□□□□ -0.12
GTF2F1-201ENST00000394456 ACTR5Q9H9F9 607 aaPredicted RBP14.29□□□□□ -0.12
GTF2F1-201ENST00000394456 C17orf75Q9HAS0 396 aa14.29□□□□□ -0.12
GTF2F1-201ENST00000394456 AVENQ9NQS1 362 aaPredicted RBP14.29□□□□□ -0.12
GTF2F1-201ENST00000394456 SNX3O60493 162 aa14.29□□□□□ -0.12
GTF2F1-201ENST00000394456 CDR1P51861 262 aa14.29□□□□□ -0.12
GTF2F1-201ENST00000394456 KCNJ2P63252 427 aa14.29□□□□□ -0.12
GTF2F1-201ENST00000394456 CYP4A22Q5TCH4 519 aa14.29□□□□□ -0.12
GTF2F1-201ENST00000394456 MFSD7Q6UXD7 560 aa14.29□□□□□ -0.12
GTF2F1-201ENST00000394456 SCARA5Q6ZMJ2 495 aa14.29□□□□□ -0.12
GTF2F1-201ENST00000394456 ABRAQ8N0Z2 381 aa14.29□□□□□ -0.12
GTF2F1-201ENST00000394456 ATL2Q8NHH9 583 aa14.29□□□□□ -0.12
GTF2F1-201ENST00000394456 TCP11Q8WWU5 503 aa14.29□□□□□ -0.12
GTF2F1-201ENST00000394456 OPTNQ96CV9 577 aa14.29□□□□□ -0.12
GTF2F1-201ENST00000394456 IVNS1ABPQ9Y6Y0 642 aa14.29□□□□□ -0.12
GTF2F1-201ENST00000394456 SPDYE5A6NIY4 337 aa14.28□□□□□ -0.12
GTF2F1-201ENST00000394456 ASAP2O43150 1006 aa14.28□□□□□ -0.12
GTF2F1-201ENST00000394456 ATG7O95352 703 aa14.28□□□□□ -0.12
GTF2F1-201ENST00000394456 ARIH2O95376 493 aa14.28□□□□□ -0.12
GTF2F1-201ENST00000394456 NOP14P78316 857 aaKnown RBP14.28□□□□□ -0.12
GTF2F1-201ENST00000394456 ORC1Q13415 861 aa14.28□□□□□ -0.12
GTF2F1-201ENST00000394456 GSTA5Q7RTV2 222 aa14.28□□□□□ -0.12
GTF2F1-201ENST00000394456 TRPM8Q7Z2W7 1104 aa14.28□□□□□ -0.12
GTF2F1-201ENST00000394456 CEP89Q96ST8 783 aa14.28□□□□□ -0.12
GTF2F1-201ENST00000394456 MSTO1Q9BUK6 570 aa14.28□□□□□ -0.12
GTF2F1-201ENST00000394456 KDM4CQ9H3R0 1056 aa14.28□□□□□ -0.12
GTF2F1-201ENST00000394456 SAMD15Q9P1V8 674 aa14.28□□□□□ -0.12
GTF2F1-201ENST00000394456 LRRC37A2A6NM11 1700 aa14.28□□□□□ -0.12
GTF2F1-201ENST00000394456 GOLGA8SH3BPF8 625 aa14.28□□□□□ -0.12
GTF2F1-201ENST00000394456 GOLGA8MH3BSY2 632 aa14.28□□□□□ -0.12
GTF2F1-201ENST00000394456 EDNRBP24530 442 aa14.28□□□□□ -0.12
GTF2F1-201ENST00000394456 MARK3P27448 753 aa14.28□□□□□ -0.12
GTF2F1-201ENST00000394456 FOXN2P32314 431 aa14.28□□□□□ -0.12
GTF2F1-201ENST00000394456 EPHX2P34913 555 aa14.28□□□□□ -0.12
GTF2F1-201ENST00000394456 ELF3P78545 371 aaPredicted RBP14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms