RNA–Protein interactions for RNA: ENST00000389301.7

FANCA-202, Transcript of FA complementation group A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FANCA, Length 5,451 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-202ENST00000389301 F5H6K3 240 aa13.08□□□□□ -0.32
FANCA-202ENST00000389301 ATP9AO75110 1047 aa13.08□□□□□ -0.32
FANCA-202ENST00000389301 KRT16P08779 473 aa13.08□□□□□ -0.32
FANCA-202ENST00000389301 KLRC3Q07444 240 aa13.08□□□□□ -0.32
FANCA-202ENST00000389301 UGP2Q16851 508 aa13.08□□□□□ -0.32
FANCA-202ENST00000389301 SUPT20HL1Q3ZLR7 823 aa13.08□□□□□ -0.32
FANCA-202ENST00000389301 SPDYAQ5MJ70 313 aa13.08□□□□□ -0.32
FANCA-202ENST00000389301 PAPD7Q5XG87 772 aaKnown RBP13.08□□□□□ -0.32
FANCA-202ENST00000389301 SNRNP48Q6IEG0 339 aaKnown RBP13.08□□□□□ -0.32
FANCA-202ENST00000389301 PPP4R4Q6NUP7 873 aa13.08□□□□□ -0.32
FANCA-202ENST00000389301 ATG9AQ7Z3C6 839 aa13.08□□□□□ -0.32
FANCA-202ENST00000389301 PACS2Q86VP3 889 aa13.08□□□□□ -0.32
FANCA-202ENST00000389301 SLC13A5Q86YT5 568 aaPredicted RBP13.08□□□□□ -0.32
FANCA-202ENST00000389301 ELOA2Q8IYF1 753 aaPredicted RBP13.08□□□□□ -0.32
FANCA-202ENST00000389301 TRIM54Q9BYV2 358 aa13.08□□□□□ -0.32
FANCA-202ENST00000389301 TAF6LQ9Y6J9 622 aa13.08□□□□□ -0.32
FANCA-202ENST00000389301 AP5Z1O43299 807 aa13.08□□□□□ -0.32
FANCA-202ENST00000389301 KIZQ2M2Z5 673 aa13.08□□□□□ -0.32
FANCA-202ENST00000389301 SUGP1Q8IWZ8 645 aaKnown RBP13.08□□□□□ -0.32
FANCA-202ENST00000389301 CNPY4Q8N129 248 aa13.08□□□□□ -0.32
FANCA-202ENST00000389301 SPATA18Q8TC71 538 aa13.08□□□□□ -0.32
FANCA-202ENST00000389301 WNK4Q96J92 1243 aa13.08□□□□□ -0.32
FANCA-202ENST00000389301 TMEM161AQ9NX61 479 aa13.08□□□□□ -0.32
FANCA-202ENST00000389301 AP4S1Q9Y587 144 aa13.08□□□□□ -0.32
FANCA-202ENST00000389301 HNRNPRO43390 633 aaKnown RBP13.08□□□□□ -0.32
FANCA-202ENST00000389301 FKBP9O95302 570 aa13.08□□□□□ -0.32
FANCA-202ENST00000389301 FNTAP49354 379 aa13.08□□□□□ -0.32
FANCA-202ENST00000389301 IZUMO2Q6UXV1 221 aa13.08□□□□□ -0.32
FANCA-202ENST00000389301 FKBP9P1Q75LS8 142 aa13.08□□□□□ -0.32
FANCA-202ENST00000389301 NEDD1Q8NHV4 660 aa13.08□□□□□ -0.32
FANCA-202ENST00000389301 TSPAN17Q96FV3 270 aa13.08□□□□□ -0.32
FANCA-202ENST00000389301 C17orf80Q9BSJ5 609 aa13.08□□□□□ -0.32
FANCA-202ENST00000389301 THAP2Q9H0W7 228 aa13.08□□□□□ -0.32
FANCA-202ENST00000389301 IL25Q9H293 177 aa13.08□□□□□ -0.32
FANCA-202ENST00000389301 STRNO43815 780 aa13.08□□□□□ -0.32
FANCA-202ENST00000389301 ZNF189O75820 626 aaPredicted RBP13.08□□□□□ -0.32
FANCA-202ENST00000389301 RGS7P49802 495 aa13.08□□□□□ -0.32
FANCA-202ENST00000389301 HERVK_113P62684 666 aa13.08□□□□□ -0.32
FANCA-202ENST00000389301 SNRNP35Q16560 246 aaKnown RBP13.08□□□□□ -0.32
FANCA-202ENST00000389301 WDR72Q3MJ13 1102 aa13.08□□□□□ -0.32
FANCA-202ENST00000389301 AASDHQ4L235 1098 aaPredicted RBP13.08□□□□□ -0.32
FANCA-202ENST00000389301 CCDC60Q8IWA6 550 aaPredicted RBP13.08□□□□□ -0.32
FANCA-202ENST00000389301 USP33Q8TEY7 942 aa13.08□□□□□ -0.32
FANCA-202ENST00000389301 WDR35Q9P2L0 1181 aa13.08□□□□□ -0.32
FANCA-202ENST00000389301 DDX20Q9UHI6 824 aaKnown RBP13.08□□□□□ -0.32
FANCA-202ENST00000389301 TPST1O60507 370 aa13.07□□□□□ -0.32
FANCA-202ENST00000389301 CST8O60676 142 aa13.07□□□□□ -0.32
FANCA-202ENST00000389301 USP1O94782 785 aa13.07□□□□□ -0.32
FANCA-202ENST00000389301 ACOT2P49753 483 aa13.07□□□□□ -0.32
FANCA-202ENST00000389301 ZC2HC1CQ53FD0 456 aaPredicted RBP13.07□□□□□ -0.32
FANCA-202ENST00000389301 CEP78Q5JTW2 689 aa13.07□□□□□ -0.32
FANCA-202ENST00000389301 FAM71DQ8N9W8 422 aa13.07□□□□□ -0.32
FANCA-202ENST00000389301 AFG1LQ8WV93 481 aa13.07□□□□□ -0.32
FANCA-202ENST00000389301 SPON2Q9BUD6 331 aa13.07□□□□□ -0.32
FANCA-202ENST00000389301 ZCWPW1Q9H0M4 648 aa13.07□□□□□ -0.32
FANCA-202ENST00000389301 ZNF556Q9HAH1 456 aa13.07□□□□□ -0.32
FANCA-202ENST00000389301 SENP2Q9HC62 589 aa13.07□□□□□ -0.32
FANCA-202ENST00000389301 CAB39Q9Y376 341 aaPredicted RBP13.07□□□□□ -0.32
FANCA-202ENST00000389301 COPG1Q9Y678 874 aaKnown RBP13.07□□□□□ -0.32
FANCA-202ENST00000389301 SMAPO00193 183 aa13.07□□□□□ -0.32
FANCA-202ENST00000389301 AP3B1O00203 1094 aa13.07□□□□□ -0.32
FANCA-202ENST00000389301 PSMC3P17980 439 aa13.07□□□□□ -0.32
FANCA-202ENST00000389301 PAX7P23759 505 aa13.07□□□□□ -0.32
FANCA-202ENST00000389301 ZNF235Q14590 738 aa13.07□□□□□ -0.32
FANCA-202ENST00000389301 SMTNL2Q2TAL5 461 aa13.07□□□□□ -0.32
FANCA-202ENST00000389301 TWF2Q6IBS0 349 aaKnown RBP13.07□□□□□ -0.32
FANCA-202ENST00000389301 PODNQ7Z5L7 613 aa13.07□□□□□ -0.32
FANCA-202ENST00000389301 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.07□□□□□ -0.32
FANCA-202ENST00000389301 ASAP3Q8TDY4 903 aa13.07□□□□□ -0.32
FANCA-202ENST00000389301 KIF12Q96FN5 646 aa13.07□□□□□ -0.32
FANCA-202ENST00000389301 ZSWIM1Q9BR11 485 aa13.07□□□□□ -0.32
FANCA-202ENST00000389301 RNF146Q9NTX7 359 aa13.07□□□□□ -0.32
FANCA-202ENST00000389301 NLRP1Q9C000 1473 aa13.07□□□□□ -0.32
FANCA-202ENST00000389301 MEI1Q5TIA1 1274 aa13.07□□□□□ -0.32
FANCA-202ENST00000389301 LRRN4CLQ8ND94 238 aa13.07□□□□□ -0.32
FANCA-202ENST00000389301 BBS2Q9BXC9 721 aa13.07□□□□□ -0.32
FANCA-202ENST00000389301 KLHL25Q9H0H3 589 aa13.07□□□□□ -0.32
FANCA-202ENST00000389301 GPBP1L1Q9HC44 474 aaPredicted RBP13.07□□□□□ -0.32
FANCA-202ENST00000389301 CD44P16070 742 aaKnown RBP13.07□□□□□ -0.32
FANCA-202ENST00000389301 RECQLP46063 649 aaPredicted RBP13.07□□□□□ -0.32
FANCA-202ENST00000389301 KCNK10P57789 538 aa13.07□□□□□ -0.32
FANCA-202ENST00000389301 ADRM1Q16186 407 aa13.07□□□□□ -0.32
FANCA-202ENST00000389301 PLEKHM3Q6ZWE6 761 aa13.07□□□□□ -0.32
FANCA-202ENST00000389301 MTDHQ86UE4 582 aaKnown RBP13.07□□□□□ -0.32
FANCA-202ENST00000389301 OTUB1Q96FW1 271 aaPredicted RBP13.07□□□□□ -0.32
FANCA-202ENST00000389301 SH2D3AQ9BRG2 576 aa13.07□□□□□ -0.32
FANCA-202ENST00000389301 CD209Q9NNX6 404 aa13.07□□□□□ -0.32
FANCA-202ENST00000389301 MRGBPQ9NV56 204 aa13.07□□□□□ -0.32
FANCA-202ENST00000389301 POLBP06746 335 aa13.06□□□□□ -0.32
FANCA-202ENST00000389301 HSD17B4P51659 736 aa13.06□□□□□ -0.32
FANCA-202ENST00000389301 CACNA2D1P54289 1103 aa13.06□□□□□ -0.32
FANCA-202ENST00000389301 CCDC142Q17RM4 750 aa13.06□□□□□ -0.32
FANCA-202ENST00000389301 DCAF4L1Q3SXM0 396 aa13.06□□□□□ -0.32
FANCA-202ENST00000389301 HORMAD1Q86X24 394 aa13.06□□□□□ -0.32
FANCA-202ENST00000389301 ASIC4Q96FT7 647 aa13.06□□□□□ -0.32
FANCA-202ENST00000389301 FAM32AQ9Y421 112 aaKnown RBP13.06□□□□□ -0.32
FANCA-202ENST00000389301 PRPF4O43172 522 aaKnown RBP eCLIP13.06□□□□□ -0.321e-6■■■□□ 15.8
FANCA-202ENST00000389301 LZTS3O60299 673 aaPredicted RBP13.06□□□□□ -0.32
FANCA-202ENST00000389301 PRLRP16471 622 aa13.06□□□□□ -0.32
FANCA-202ENST00000389301 SERPINB5P36952 375 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms